RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 GSCP56915 257 aaPredicted RBP9.87□□□□□ -0.83
NPLOC4-208ENST00000572351 CCZ1BP86790 482 aa9.87□□□□□ -0.83
NPLOC4-208ENST00000572351 CCZ1P86791 482 aaPredicted RBP9.87□□□□□ -0.83
NPLOC4-208ENST00000572351 MAMLD1Q13495 774 aa9.87□□□□□ -0.83
NPLOC4-208ENST00000572351 SMAD2Q15796 467 aaKnown RBP9.87□□□□□ -0.83
NPLOC4-208ENST00000572351 PLEKHA7Q6IQ23 1121 aa9.87□□□□□ -0.83
NPLOC4-208ENST00000572351 BHLHA9Q7RTU4 235 aa9.87□□□□□ -0.83
NPLOC4-208ENST00000572351 CMTM8Q8IZV2 173 aa9.87□□□□□ -0.83
NPLOC4-208ENST00000572351 EMC1Q8N766 993 aa9.87□□□□□ -0.83
NPLOC4-208ENST00000572351 ARL14EPQ8N8R7 260 aaPredicted RBP9.87□□□□□ -0.83
NPLOC4-208ENST00000572351 ZSCAN18Q8TBC5 510 aaPredicted RBP9.87□□□□□ -0.83
NPLOC4-208ENST00000572351 RPGRIP1Q96KN7 1286 aa9.87□□□□□ -0.83
NPLOC4-208ENST00000572351 ZSWIM3Q96MP5 696 aa9.87□□□□□ -0.83
NPLOC4-208ENST00000572351 ZNF830Q96NB3 372 aaPredicted RBP9.87□□□□□ -0.83
NPLOC4-208ENST00000572351 SLC2A13Q96QE2 648 aa9.87□□□□□ -0.83
NPLOC4-208ENST00000572351 MYADMQ96S97 322 aa9.87□□□□□ -0.83
NPLOC4-208ENST00000572351 NUP85Q9BW27 656 aa9.87□□□□□ -0.83
NPLOC4-208ENST00000572351 PHF7Q9BWX1 381 aaPredicted RBP9.87□□□□□ -0.83
NPLOC4-208ENST00000572351 SMG9Q9H0W8 520 aaKnown RBP9.87□□□□□ -0.83
NPLOC4-208ENST00000572351 MARCH2Q9P0N8 246 aa9.87□□□□□ -0.83
NPLOC4-208ENST00000572351 COX16Q9P0S2 106 aa9.87□□□□□ -0.83
NPLOC4-208ENST00000572351 INTUQ9ULD6 942 aa9.87□□□□□ -0.83
NPLOC4-208ENST00000572351 NENFQ9UMX5 172 aa9.87□□□□□ -0.83
NPLOC4-208ENST00000572351 USTQ9Y2C2 406 aa9.87□□□□□ -0.83
NPLOC4-208ENST00000572351 CPQQ9Y646 472 aa9.87□□□□□ -0.83
NPLOC4-208ENST00000572351 ZFP37Q9Y6Q3 630 aaPredicted RBP9.87□□□□□ -0.83
NPLOC4-208ENST00000572351 CDH23Q9H251 3354 aa9.87□□□□□ -0.83
NPLOC4-208ENST00000572351 SLC12A8A0AV02 714 aa9.86□□□□□ -0.83
NPLOC4-208ENST00000572351 NRG2O14511 850 aaPredicted RBP9.86□□□□□ -0.83
NPLOC4-208ENST00000572351 OAS1P00973 400 aaKnown RBP9.86□□□□□ -0.83
NPLOC4-208ENST00000572351 CYP1A2P05177 515 aa9.86□□□□□ -0.83
NPLOC4-208ENST00000572351 CCDC175P0C221 793 aa9.86□□□□□ -0.83
NPLOC4-208ENST00000572351 LAMP2P13473 410 aa9.86□□□□□ -0.83
NPLOC4-208ENST00000572351 IL9P15248 144 aa9.86□□□□□ -0.83
NPLOC4-208ENST00000572351 PSMA2P25787 234 aa9.86□□□□□ -0.83
NPLOC4-208ENST00000572351 GBP1P32455 592 aa9.86□□□□□ -0.83
NPLOC4-208ENST00000572351 RFC1P35251 1148 aaPredicted RBP9.86□□□□□ -0.83
NPLOC4-208ENST00000572351 FLT3P36888 993 aa9.86□□□□□ -0.83
NPLOC4-208ENST00000572351 MATKP42679 507 aa9.86□□□□□ -0.83
NPLOC4-208ENST00000572351 NOP2P46087 812 aaKnown RBP9.86□□□□□ -0.83
NPLOC4-208ENST00000572351 VAV2P52735 878 aa9.86□□□□□ -0.83
NPLOC4-208ENST00000572351 NAP1L1P55209 391 aaKnown RBP9.86□□□□□ -0.83
NPLOC4-208ENST00000572351 KIF5AQ12840 1032 aa9.86□□□□□ -0.83
NPLOC4-208ENST00000572351 NME3Q13232 169 aa9.86□□□□□ -0.83
NPLOC4-208ENST00000572351 CDO1Q16878 200 aa9.86□□□□□ -0.83
NPLOC4-208ENST00000572351 FAM78AQ5JUQ0 283 aa9.86□□□□□ -0.83
NPLOC4-208ENST00000572351 SYPL2Q5VXT5 272 aa9.86□□□□□ -0.83
NPLOC4-208ENST00000572351 KLHDC10Q6PID8 442 aa9.86□□□□□ -0.83
NPLOC4-208ENST00000572351 SND1Q7KZF4 910 aaKnown RBP eCLIP9.86□□□□□ -0.83
NPLOC4-208ENST00000572351 BEND5Q7L4P6 421 aa9.86□□□□□ -0.83
NPLOC4-208ENST00000572351 ARID3BQ8IVW6 561 aaPredicted RBP9.86□□□□□ -0.83
NPLOC4-208ENST00000572351 JOSD2Q8TAC2 188 aa9.86□□□□□ -0.83
NPLOC4-208ENST00000572351 ZNF564Q8TBZ8 553 aaPredicted RBP9.86□□□□□ -0.83
NPLOC4-208ENST00000572351 ADAM32Q8TC27 787 aa9.86□□□□□ -0.83
NPLOC4-208ENST00000572351 DQX1Q8TE96 717 aaKnown RBP9.86□□□□□ -0.83
NPLOC4-208ENST00000572351 RXFP2Q8WXD0 754 aa9.86□□□□□ -0.83
NPLOC4-208ENST00000572351 SMARCD2Q92925 531 aa9.86□□□□□ -0.83
NPLOC4-208ENST00000572351 RNF34Q969K3 372 aa9.86□□□□□ -0.83
NPLOC4-208ENST00000572351 ARHGEF26Q96DR7 871 aa9.86□□□□□ -0.83
NPLOC4-208ENST00000572351 SERPINB11Q96P15 392 aa9.86□□□□□ -0.83
NPLOC4-208ENST00000572351 SLC22A12Q96S37 553 aa9.86□□□□□ -0.83
NPLOC4-208ENST00000572351 CYP2S1Q96SQ9 504 aa9.86□□□□□ -0.83
NPLOC4-208ENST00000572351 RNF38Q9H0F5 515 aa9.86□□□□□ -0.83
NPLOC4-208ENST00000572351 SMOC2Q9H3U7 446 aa9.86□□□□□ -0.83
NPLOC4-208ENST00000572351 DDIT4Q9NX09 232 aa9.86□□□□□ -0.83
NPLOC4-208ENST00000572351 RRN3Q9NYV6 651 aa9.86□□□□□ -0.83
NPLOC4-208ENST00000572351 UVRAGQ9P2Y5 699 aa9.86□□□□□ -0.83
NPLOC4-208ENST00000572351 SFMBT1Q9UHJ3 866 aa9.86□□□□□ -0.83
NPLOC4-208ENST00000572351 ANAPC7Q9UJX3 599 aa9.86□□□□□ -0.83
NPLOC4-208ENST00000572351 TMEM59LQ9UK28 342 aa9.86□□□□□ -0.83
NPLOC4-208ENST00000572351 ARHGAP26Q9UNA1 814 aa9.86□□□□□ -0.83
NPLOC4-208ENST00000572351 SH3BP1Q9Y3L3 701 aa9.86□□□□□ -0.83
NPLOC4-208ENST00000572351 C2CD4BA6NLJ0 364 aa9.85□□□□□ -0.83
NPLOC4-208ENST00000572351 M0QYT0 321 aa9.85□□□□□ -0.83
NPLOC4-208ENST00000572351 MYO1FO00160 1098 aa9.85□□□□□ -0.83
NPLOC4-208ENST00000572351 MSI1O43347 362 aaKnown RBP9.85□□□□□ -0.83
NPLOC4-208ENST00000572351 OLFM2O95897 454 aa9.85□□□□□ -0.83
NPLOC4-208ENST00000572351 TRUB2O95900 331 aaKnown RBP9.85□□□□□ -0.83
NPLOC4-208ENST00000572351 FYNP06241 537 aa9.85□□□□□ -0.83
NPLOC4-208ENST00000572351 HMBSP08397 361 aa9.85□□□□□ -0.83
NPLOC4-208ENST00000572351 IRF1P10914 325 aa9.85□□□□□ -0.83
NPLOC4-208ENST00000572351 CHRM1P11229 460 aaPredicted RBP9.85□□□□□ -0.83
NPLOC4-208ENST00000572351 RDXP35241 583 aaKnown RBP9.85□□□□□ -0.83
NPLOC4-208ENST00000572351 KCNQ1P51787 676 aa9.85□□□□□ -0.83
NPLOC4-208ENST00000572351 KPNA1P52294 538 aaPredicted RBP9.85□□□□□ -0.83
NPLOC4-208ENST00000572351 RPL7AP62424 266 aaKnown RBP9.85□□□□□ -0.83
NPLOC4-208ENST00000572351 SLC7A9P82251 487 aa9.85□□□□□ -0.83
NPLOC4-208ENST00000572351 COG7P83436 770 aa9.85□□□□□ -0.83
NPLOC4-208ENST00000572351 ATP11AP98196 1134 aa9.85□□□□□ -0.83
NPLOC4-208ENST00000572351 SLC25A52Q3SY17 297 aa9.85□□□□□ -0.83
NPLOC4-208ENST00000572351 PPP1R15BQ5SWA1 713 aa9.85□□□□□ -0.83
NPLOC4-208ENST00000572351 CC2D1AQ6P1N0 951 aaPredicted RBP9.85□□□□□ -0.83
NPLOC4-208ENST00000572351 MSANTD2Q6P1R3 559 aa9.85□□□□□ -0.83
NPLOC4-208ENST00000572351 MTSS1LQ765P7 747 aa9.85□□□□□ -0.83
NPLOC4-208ENST00000572351 ARCQ7LC44 396 aa9.85□□□□□ -0.83
NPLOC4-208ENST00000572351 TAC4Q86UU9 113 aa9.85□□□□□ -0.83
NPLOC4-208ENST00000572351 DDX42Q86XP3 938 aaKnown RBP eCLIP9.85□□□□□ -0.83
NPLOC4-208ENST00000572351 RHOT2Q8IXI1 618 aa9.85□□□□□ -0.83
NPLOC4-208ENST00000572351 ZNF276Q8N554 614 aa9.85□□□□□ -0.83
NPLOC4-208ENST00000572351 CELF5Q8N6W0 485 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms