RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 PLK2Q9NYY3 685 aa20.98■□□□□ 0.95
CCDC40-206ENST00000572083 MARK1Q9P0L2 795 aa20.98■□□□□ 0.95
CCDC40-206ENST00000572083 WDR35Q9P2L0 1181 aa20.98■□□□□ 0.95
CCDC40-206ENST00000572083 A0A1B0GTW7 788 aa20.97■□□□□ 0.95
CCDC40-206ENST00000572083 PHACTR2O75167 634 aa20.97■□□□□ 0.95
CCDC40-206ENST00000572083 BEST1O76090 585 aa20.97■□□□□ 0.95
CCDC40-206ENST00000572083 NCAM1P13591 858 aa20.97■□□□□ 0.95
CCDC40-206ENST00000572083 ATICP31939 592 aa20.97■□□□□ 0.95
CCDC40-206ENST00000572083 ORC1Q13415 861 aa20.97■□□□□ 0.95
CCDC40-206ENST00000572083 ZNF699Q32M78 642 aa20.97■□□□□ 0.95
CCDC40-206ENST00000572083 FUT11Q495W5 492 aa20.97■□□□□ 0.95
CCDC40-206ENST00000572083 ACOT1Q86TX2 421 aa20.97■□□□□ 0.95
CCDC40-206ENST00000572083 NELFCDQ8IXH7 590 aa20.97■□□□□ 0.95
CCDC40-206ENST00000572083 TNIP3Q96KP6 325 aa20.97■□□□□ 0.95
CCDC40-206ENST00000572083 BBC3Q96PG8 261 aaPredicted RBP20.97■□□□□ 0.95
CCDC40-206ENST00000572083 SDCBP2Q9H190 292 aa20.97■□□□□ 0.95
CCDC40-206ENST00000572083 TLR8Q9NR97 1041 aaKnown RBP20.97■□□□□ 0.95
CCDC40-206ENST00000572083 COMMD8Q9NX08 183 aa20.97■□□□□ 0.95
CCDC40-206ENST00000572083 WSB2Q9NYS7 404 aaPredicted RBP20.97■□□□□ 0.95
CCDC40-206ENST00000572083 LSM7Q9UK45 103 aaKnown RBP20.97■□□□□ 0.95
CCDC40-206ENST00000572083 ACACAQ13085 2346 aa20.96■□□□□ 0.95
CCDC40-206ENST00000572083 GFRA2O00451 464 aa20.96■□□□□ 0.95
CCDC40-206ENST00000572083 CASP4P49662 377 aa20.96■□□□□ 0.95
CCDC40-206ENST00000572083 MAP3K7CLP57077 242 aa20.96■□□□□ 0.95
CCDC40-206ENST00000572083 STARD3Q14849 445 aa20.96■□□□□ 0.95
CCDC40-206ENST00000572083 EPM2AIP1Q7L775 607 aaPredicted RBP20.96■□□□□ 0.95
CCDC40-206ENST00000572083 GLRX5Q86SX6 157 aa20.96■□□□□ 0.95
CCDC40-206ENST00000572083 XXYLT1Q8NBI6 393 aa20.96■□□□□ 0.95
CCDC40-206ENST00000572083 DNASE2BQ8WZ79 361 aa20.96■□□□□ 0.95
CCDC40-206ENST00000572083 P2RY11Q96G91 374 aa20.96■□□□□ 0.95
CCDC40-206ENST00000572083 LRIG1Q96JA1 1093 aa20.96■□□□□ 0.95
CCDC40-206ENST00000572083 MKRN2Q9H000 416 aaKnown RBP20.96■□□□□ 0.95
CCDC40-206ENST00000572083 GAREM1Q9H706 876 aa20.96■□□□□ 0.95
CCDC40-206ENST00000572083 PRDM16Q9HAZ2 1276 aa20.96■□□□□ 0.95
CCDC40-206ENST00000572083 OSER1Q9NX31 292 aa20.96■□□□□ 0.95
CCDC40-206ENST00000572083 FNDC3AQ9Y2H6 1198 aaKnown RBP20.96■□□□□ 0.95
CCDC40-206ENST00000572083 STON1Q9Y6Q2 735 aa20.96■□□□□ 0.95
CCDC40-206ENST00000572083 SETXQ7Z333 2677 aaKnown RBP20.95■□□□□ 0.94
CCDC40-206ENST00000572083 KCNJ18B7U540 433 aa20.95■□□□□ 0.94
CCDC40-206ENST00000572083 MDM4O15151 490 aa20.95■□□□□ 0.94
CCDC40-206ENST00000572083 CYP26A1O43174 497 aa20.95■□□□□ 0.94
CCDC40-206ENST00000572083 CISD3P0C7P0 127 aa20.95■□□□□ 0.94
CCDC40-206ENST00000572083 ATP5C1P36542 298 aaKnown RBP20.95■□□□□ 0.94
CCDC40-206ENST00000572083 ASIC1P78348 528 aa20.95■□□□□ 0.94
CCDC40-206ENST00000572083 GOLGA8FQ08AF8 430 aa20.95■□□□□ 0.94
CCDC40-206ENST00000572083 GOLGA8DPQ0D2H9 430 aa20.95■□□□□ 0.94
CCDC40-206ENST00000572083 BIRC3Q13489 604 aa20.95■□□□□ 0.94
CCDC40-206ENST00000572083 FAM26FQ5R3K3 315 aa20.95■□□□□ 0.94
CCDC40-206ENST00000572083 DCAF12L1Q5VU92 463 aa20.95■□□□□ 0.94
CCDC40-206ENST00000572083 GPRIN1Q7Z2K8 1008 aa20.95■□□□□ 0.94
CCDC40-206ENST00000572083 CACUL1Q86Y37 369 aa20.95■□□□□ 0.94
CCDC40-206ENST00000572083 MARCH9Q86YJ5 346 aa20.95■□□□□ 0.94
CCDC40-206ENST00000572083 ZNF507Q8TCN5 953 aa20.95■□□□□ 0.94
CCDC40-206ENST00000572083 SLC2A14Q8TDB8 520 aa20.95■□□□□ 0.94
CCDC40-206ENST00000572083 JAKMIP2Q96AA8 810 aa20.95■□□□□ 0.94
CCDC40-206ENST00000572083 TNMDQ9H2S6 317 aa20.95■□□□□ 0.94
CCDC40-206ENST00000572083 FBXO44Q9H4M3 255 aa20.95■□□□□ 0.94
CCDC40-206ENST00000572083 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.95■□□□□ 0.94
CCDC40-206ENST00000572083 TM7SF3Q9NS93 570 aa20.95■□□□□ 0.94
CCDC40-206ENST00000572083 USP36Q9P275 1121 aaKnown RBP20.95■□□□□ 0.94
CCDC40-206ENST00000572083 NUDT5Q9UKK9 219 aa20.95■□□□□ 0.94
CCDC40-206ENST00000572083 CILPO75339 1184 aa20.94■□□□□ 0.94
CCDC40-206ENST00000572083 CER1O95813 267 aa20.94■□□□□ 0.94
CCDC40-206ENST00000572083 BNC1Q01954 994 aa20.94■□□□□ 0.94
CCDC40-206ENST00000572083 ZNF667Q5HYK9 610 aa20.94■□□□□ 0.94
CCDC40-206ENST00000572083 VRTNQ9H8Y1 702 aa20.94■□□□□ 0.94
CCDC40-206ENST00000572083 CYLDQ9NQC7 956 aa20.94■□□□□ 0.94
CCDC40-206ENST00000572083 FAM49BQ9NUQ9 324 aa20.94■□□□□ 0.94
CCDC40-206ENST00000572083 TOR4AQ9NXH8 423 aa20.94■□□□□ 0.94
CCDC40-206ENST00000572083 HMGXB4Q9UGU5 601 aa20.94■□□□□ 0.94
CCDC40-206ENST00000572083 NFE2L3Q9Y4A8 694 aa20.94■□□□□ 0.94
CCDC40-206ENST00000572083 MYH10P35580 1976 aa20.94■□□□□ 0.94
CCDC40-206ENST00000572083 GOLGA8CPA6NN73 597 aa20.93■□□□□ 0.94
CCDC40-206ENST00000572083 MATKP42679 507 aa20.93■□□□□ 0.94
CCDC40-206ENST00000572083 IL12RB1P42701 662 aa20.93■□□□□ 0.94
CCDC40-206ENST00000572083 TPMTP51580 245 aa20.93■□□□□ 0.94
CCDC40-206ENST00000572083 METTL3Q86U44 580 aaKnown RBP20.93■□□□□ 0.94
CCDC40-206ENST00000572083 BAHD1Q8TBE0 780 aaPredicted RBP20.93■□□□□ 0.94
CCDC40-206ENST00000572083 PLEKHO2Q8TD55 490 aa20.93■□□□□ 0.94
CCDC40-206ENST00000572083 USP28Q96RU2 1077 aa20.93■□□□□ 0.94
CCDC40-206ENST00000572083 EIF2B4Q9UI10 523 aaKnown RBP20.93■□□□□ 0.94
CCDC40-206ENST00000572083 BCAT2O15382 392 aaPredicted RBP20.92■□□□□ 0.94
CCDC40-206ENST00000572083 ATXN1LP0C7T5 689 aaKnown RBP20.92■□□□□ 0.94
CCDC40-206ENST00000572083 ZNF883P0CG24 379 aa20.92■□□□□ 0.94
CCDC40-206ENST00000572083 ADORA2BP29275 332 aa20.92■□□□□ 0.94
CCDC40-206ENST00000572083 NCOA4Q13772 614 aa20.92■□□□□ 0.94
CCDC40-206ENST00000572083 SLC39A14Q15043 492 aa20.92■□□□□ 0.94
CCDC40-206ENST00000572083 E2F4Q16254 413 aa20.92■□□□□ 0.94
CCDC40-206ENST00000572083 HLA-BQ31612 363 aa20.92■□□□□ 0.94
CCDC40-206ENST00000572083 Q6ZNB5 142 aa20.92■□□□□ 0.94
CCDC40-206ENST00000572083 TMPRSS7Q7RTY8 843 aa20.92■□□□□ 0.94
CCDC40-206ENST00000572083 C12orf29Q8N999 325 aa20.92■□□□□ 0.94
CCDC40-206ENST00000572083 CADM4Q8NFZ8 388 aa20.92■□□□□ 0.94
CCDC40-206ENST00000572083 LRRC27Q9C0I9 530 aa20.92■□□□□ 0.94
CCDC40-206ENST00000572083 NMUR1Q9HB89 426 aa20.92■□□□□ 0.94
CCDC40-206ENST00000572083 CSNK1G1Q9HCP0 422 aa20.92■□□□□ 0.94
CCDC40-206ENST00000572083 SCUBE2Q9NQ36 999 aa20.92■□□□□ 0.94
CCDC40-206ENST00000572083 ITM2CQ9NQX7 267 aa20.92■□□□□ 0.94
CCDC40-206ENST00000572083 KBTBD4Q9NVX7 518 aa20.92■□□□□ 0.94
CCDC40-206ENST00000572083 KIAA1522Q9P206 1035 aaPredicted RBP20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms