RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 STK32AQ8WU08 396 aa7.32□□□□□ -1.24
SMG6-209ENST00000571442 OSCP1Q8WVF1 389 aa7.32□□□□□ -1.24
SMG6-209ENST00000571442 EZH1Q92800 747 aaPredicted RBP7.32□□□□□ -1.24
SMG6-209ENST00000571442 PPP1R13BQ96KQ4 1090 aa7.32□□□□□ -1.24
SMG6-209ENST00000571442 SPAG5Q96R06 1193 aa7.32□□□□□ -1.24
SMG6-209ENST00000571442 DDX23Q9BUQ8 820 aaKnown RBP7.32□□□□□ -1.24
SMG6-209ENST00000571442 DNAI2Q9GZS0 605 aa7.32□□□□□ -1.24
SMG6-209ENST00000571442 TBC1D17Q9HA65 648 aa7.32□□□□□ -1.24
SMG6-209ENST00000571442 KIF9Q9HAQ2 790 aa7.32□□□□□ -1.24
SMG6-209ENST00000571442 FBRSL1Q9HCM7 1045 aaKnown RBP7.32□□□□□ -1.24
SMG6-209ENST00000571442 TAS2R14Q9NYV8 317 aa7.32□□□□□ -1.24
SMG6-209ENST00000571442 CLIC5Q9NZA1 410 aa7.32□□□□□ -1.24
SMG6-209ENST00000571442 ZMYM5Q9UJ78 669 aa7.32□□□□□ -1.24
SMG6-209ENST00000571442 RASAL2Q9UJF2 1139 aa7.32□□□□□ -1.24
SMG6-209ENST00000571442 FBXL21Q9UKT6 434 aa7.32□□□□□ -1.24
SMG6-209ENST00000571442 KIAA1549LQ6ZVL6 1849 aa7.31□□□□□ -1.24
SMG6-209ENST00000571442 SLC12A8A0AV02 714 aa7.31□□□□□ -1.24
SMG6-209ENST00000571442 CYP17A1P05093 508 aa7.31□□□□□ -1.24
SMG6-209ENST00000571442 PLEKP08567 350 aaPredicted RBP7.31□□□□□ -1.24
SMG6-209ENST00000571442 RALAP11233 206 aa7.31□□□□□ -1.24
SMG6-209ENST00000571442 TARSP26639 723 aaKnown RBP7.31□□□□□ -1.24
SMG6-209ENST00000571442 CTHP32929 405 aa7.31□□□□□ -1.24
SMG6-209ENST00000571442 KRT9P35527 623 aa7.31□□□□□ -1.24
SMG6-209ENST00000571442 ATP5C1P36542 298 aaKnown RBP7.31□□□□□ -1.24
SMG6-209ENST00000571442 GABRB2P47870 512 aa7.31□□□□□ -1.24
SMG6-209ENST00000571442 SLC8A3P57103 927 aa7.31□□□□□ -1.24
SMG6-209ENST00000571442 STARD6P59095 220 aa7.31□□□□□ -1.24
SMG6-209ENST00000571442 BPIFB4P59827 614 aa7.31□□□□□ -1.24
SMG6-209ENST00000571442 RUNX3Q13761 415 aa7.31□□□□□ -1.24
SMG6-209ENST00000571442 ARHGAP29Q52LW3 1261 aa7.31□□□□□ -1.24
SMG6-209ENST00000571442 RAB6CQ53S08 254 aa7.31□□□□□ -1.24
SMG6-209ENST00000571442 FIGNQ5HY92 759 aa7.31□□□□□ -1.24
SMG6-209ENST00000571442 BTBD8Q5XKL5 378 aa7.31□□□□□ -1.24
SMG6-209ENST00000571442 HGSNATQ68CP4 663 aa7.31□□□□□ -1.24
SMG6-209ENST00000571442 OR6B2Q6IFH4 312 aa7.31□□□□□ -1.24
SMG6-209ENST00000571442 MSANTD2Q6P1R3 559 aa7.31□□□□□ -1.24
SMG6-209ENST00000571442 KLHDC10Q6PID8 442 aa7.31□□□□□ -1.24
SMG6-209ENST00000571442 RHBDF2Q6PJF5 856 aa7.31□□□□□ -1.24
SMG6-209ENST00000571442 CACNA2D4Q7Z3S7 1137 aa7.31□□□□□ -1.24
SMG6-209ENST00000571442 ZNF571Q7Z3V5 609 aaPredicted RBP7.31□□□□□ -1.24
SMG6-209ENST00000571442 BMP8AQ7Z5Y6 402 aa7.31□□□□□ -1.24
SMG6-209ENST00000571442 TAC4Q86UU9 113 aa7.31□□□□□ -1.24
SMG6-209ENST00000571442 XYLT1Q86Y38 959 aa7.31□□□□□ -1.24
SMG6-209ENST00000571442 FMNL3Q8IVF7 1028 aa7.31□□□□□ -1.24
SMG6-209ENST00000571442 YAF2Q8IY57 180 aa7.31□□□□□ -1.24
SMG6-209ENST00000571442 ADGRG2Q8IZP9 1017 aa7.31□□□□□ -1.24
SMG6-209ENST00000571442 DEFB106AQ8N104 65 aa7.31□□□□□ -1.24
SMG6-209ENST00000571442 FLCNQ8NFG4 579 aa7.31□□□□□ -1.24
SMG6-209ENST00000571442 ADAM32Q8TC27 787 aa7.31□□□□□ -1.24
SMG6-209ENST00000571442 DQX1Q8TE96 717 aaKnown RBP7.31□□□□□ -1.24
SMG6-209ENST00000571442 CPLX3Q8WVH0 158 aa7.31□□□□□ -1.24
SMG6-209ENST00000571442 IRGQQ8WZA9 623 aa7.31□□□□□ -1.24
SMG6-209ENST00000571442 DNASE1L2Q92874 299 aa7.31□□□□□ -1.24
SMG6-209ENST00000571442 IRF7Q92985 503 aa7.31□□□□□ -1.24
SMG6-209ENST00000571442 PBXIP1Q96AQ6 731 aa7.31□□□□□ -1.24
SMG6-209ENST00000571442 E2F7Q96AV8 911 aa7.31□□□□□ -1.24
SMG6-209ENST00000571442 MYEOVQ96EZ4 313 aa7.31□□□□□ -1.24
SMG6-209ENST00000571442 AGPAT1Q99943 283 aa7.31□□□□□ -1.24
SMG6-209ENST00000571442 RAB6CQ9H0N0 254 aa7.31□□□□□ -1.24
SMG6-209ENST00000571442 HAUS4Q9H6D7 363 aa7.31□□□□□ -1.24
SMG6-209ENST00000571442 ECT2Q9H8V3 914 aa7.31□□□□□ -1.24
SMG6-209ENST00000571442 TRPV5Q9NQA5 729 aa7.31□□□□□ -1.24
SMG6-209ENST00000571442 RBM12Q9NTZ6 932 aaKnown RBP7.31□□□□□ -1.24
SMG6-209ENST00000571442 DUS2Q9NX74 493 aaKnown RBP7.31□□□□□ -1.24
SMG6-209ENST00000571442 MARCH2Q9P0N8 246 aa7.31□□□□□ -1.24
SMG6-209ENST00000571442 XPO7Q9UIA9 1087 aaKnown RBP7.31□□□□□ -1.24
SMG6-209ENST00000571442 DNMT3LQ9UJW3 386 aa7.31□□□□□ -1.24
SMG6-209ENST00000571442 DAAM1Q9Y4D1 1078 aa7.31□□□□□ -1.24
SMG6-209ENST00000571442 PIAS3Q9Y6X2 628 aa7.31□□□□□ -1.24
SMG6-209ENST00000571442 TCRBV5S1A1TA0A578 114 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 E2F8A0AVK6 867 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 SPECC1L-ADORA2AF8WAN1 911 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 I6L893 689 aaPredicted RBP7.3□□□□□ -1.24
SMG6-209ENST00000571442 DDX3XO00571 662 aaKnown RBP eCLIP7.3□□□□□ -1.24
SMG6-209ENST00000571442 TRDMT1O14717 391 aaKnown RBP7.3□□□□□ -1.24
SMG6-209ENST00000571442 TRIM24O15164 1050 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 FBXO21O94952 628 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 IGLV3-25P01717 112 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 IGLV3-27P01718 113 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 DCNP07585 359 aaKnown RBP7.3□□□□□ -1.24
SMG6-209ENST00000571442 CHRM1P11229 460 aaPredicted RBP7.3□□□□□ -1.24
SMG6-209ENST00000571442 FERP16591 822 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 CASP14P31944 242 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 GJA4P35212 333 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 FLT3P36888 993 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 OPRD1P41143 372 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 PRKCIP41743 596 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 ACADSBP45954 432 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 SLC6A11P48066 632 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 IFNAR2P48551 515 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 PSEN1P49768 467 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 SGSHP51688 502 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 ATXN1P54253 815 aaKnown RBP7.3□□□□□ -1.24
SMG6-209ENST00000571442 PTPN5P54829 565 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 TPM4P67936 248 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 SLC6A3Q01959 620 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 EIF4EBP2Q13542 120 aaPredicted RBP7.3□□□□□ -1.24
SMG6-209ENST00000571442 GAS6Q14393 721 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 PON2Q15165 354 aa7.3□□□□□ -1.24
SMG6-209ENST00000571442 DHCR24Q15392 516 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms