RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 NDE1Q9NXR1 346 aa18.11■□□□□ 0.49
SCARF1-205ENST00000571272 INO80B-WBP1J3KQ70 363 aa18.1■□□□□ 0.49
SCARF1-205ENST00000571272 LYPLA1O75608 230 aaPredicted RBP18.1■□□□□ 0.49
SCARF1-205ENST00000571272 KRT38O76015 456 aa18.1■□□□□ 0.49
SCARF1-205ENST00000571272 ENDOD1O94919 500 aa18.1■□□□□ 0.49
SCARF1-205ENST00000571272 PRKCHP24723 683 aa18.1■□□□□ 0.49
SCARF1-205ENST00000571272 GPD2P43304 727 aa18.1■□□□□ 0.49
SCARF1-205ENST00000571272 SMAD1Q15797 465 aaKnown RBP18.1■□□□□ 0.49
SCARF1-205ENST00000571272 TRMT5Q32P41 509 aaKnown RBP18.1■□□□□ 0.49
SCARF1-205ENST00000571272 C16orf46Q6P387 395 aa18.1■□□□□ 0.49
SCARF1-205ENST00000571272 PPP1R14CQ8TAE6 165 aa18.1■□□□□ 0.49
SCARF1-205ENST00000571272 NLRP4Q96MN2 994 aa18.1■□□□□ 0.49
SCARF1-205ENST00000571272 INO80BQ9C086 356 aaPredicted RBP18.1■□□□□ 0.49
SCARF1-205ENST00000571272 KLC2Q9H0B6 622 aa18.1■□□□□ 0.49
SCARF1-205ENST00000571272 NGRNQ9NPE2 291 aaKnown RBP18.1■□□□□ 0.49
SCARF1-205ENST00000571272 ZNF180Q9UJW8 692 aa18.1■□□□□ 0.49
SCARF1-205ENST00000571272 F5H423 210 aaPredicted RBP18.1■□□□□ 0.49
SCARF1-205ENST00000571272 NFICP08651 508 aa18.1■□□□□ 0.49
SCARF1-205ENST00000571272 C6orf222P0C671 652 aaPredicted RBP18.1■□□□□ 0.49
SCARF1-205ENST00000571272 IL4RP24394 825 aa18.1■□□□□ 0.49
SCARF1-205ENST00000571272 TCF7P36402 384 aaPredicted RBP18.1■□□□□ 0.49
SCARF1-205ENST00000571272 SLC25A3Q00325 362 aa18.1■□□□□ 0.49
SCARF1-205ENST00000571272 STX3Q13277 289 aa18.1■□□□□ 0.49
SCARF1-205ENST00000571272 SURF1Q15526 300 aa18.1■□□□□ 0.49
SCARF1-205ENST00000571272 LRRC36Q1X8D7 754 aa18.1■□□□□ 0.49
SCARF1-205ENST00000571272 FAM47CQ5HY64 1035 aa18.1■□□□□ 0.49
SCARF1-205ENST00000571272 ZBTB8OSQ8IWT0 167 aa18.1■□□□□ 0.49
SCARF1-205ENST00000571272 GALNT15Q8N3T1 639 aa18.1■□□□□ 0.49
SCARF1-205ENST00000571272 POU5F2Q8N7G0 328 aa18.1■□□□□ 0.49
SCARF1-205ENST00000571272 GSTCDQ8NEC7 633 aa18.1■□□□□ 0.49
SCARF1-205ENST00000571272 FGD4Q96M96 766 aa18.1■□□□□ 0.49
SCARF1-205ENST00000571272 CNPY3Q9BT09 278 aa18.1■□□□□ 0.49
SCARF1-205ENST00000571272 IGKV6D-21A0A0A0MT36 114 aa18.09■□□□□ 0.49
SCARF1-205ENST00000571272 ARHGAP42A6NI28 874 aa18.09■□□□□ 0.49
SCARF1-205ENST00000571272 FARP2O94887 1054 aaPredicted RBP18.09■□□□□ 0.49
SCARF1-205ENST00000571272 SNUPNO95149 360 aaKnown RBP18.09■□□□□ 0.49
SCARF1-205ENST00000571272 ITGB3P05106 788 aa18.09■□□□□ 0.49
SCARF1-205ENST00000571272 BPGMP07738 259 aa18.09■□□□□ 0.49
SCARF1-205ENST00000571272 SIP14410 1827 aa18.09■□□□□ 0.49
SCARF1-205ENST00000571272 GRIA1P42261 906 aa18.09■□□□□ 0.49
SCARF1-205ENST00000571272 AP2B1P63010 937 aa18.09■□□□□ 0.49
SCARF1-205ENST00000571272 BIRC2Q13490 618 aa18.09■□□□□ 0.49
SCARF1-205ENST00000571272 TNFAIP1Q13829 316 aa18.09■□□□□ 0.49
SCARF1-205ENST00000571272 MYLK4Q86YV6 388 aaPredicted RBP18.09■□□□□ 0.49
SCARF1-205ENST00000571272 UNC5BQ8IZJ1 945 aa18.09■□□□□ 0.49
SCARF1-205ENST00000571272 C1orf127Q8N9H9 656 aa18.09■□□□□ 0.49
SCARF1-205ENST00000571272 TMEM176AQ96HP8 235 aa18.09■□□□□ 0.49
SCARF1-205ENST00000571272 LYNP07948 512 aa18.09■□□□□ 0.49
SCARF1-205ENST00000571272 GSTA2P09210 222 aa18.09■□□□□ 0.49
SCARF1-205ENST00000571272 RGS7P49802 495 aa18.09■□□□□ 0.49
SCARF1-205ENST00000571272 OAZ1P54368 228 aa18.09■□□□□ 0.49
SCARF1-205ENST00000571272 ROR2Q01974 943 aaKnown RBP18.09■□□□□ 0.49
SCARF1-205ENST00000571272 DSG1Q02413 1049 aa18.09■□□□□ 0.49
SCARF1-205ENST00000571272 RBBP5Q15291 538 aaKnown RBP18.09■□□□□ 0.49
SCARF1-205ENST00000571272 PPP6R3Q5H9R7 873 aaPredicted RBP18.09■□□□□ 0.49
SCARF1-205ENST00000571272 SAMD7Q7Z3H4 446 aa18.09■□□□□ 0.49
SCARF1-205ENST00000571272 PQLC3Q8N755 202 aa18.09■□□□□ 0.49
SCARF1-205ENST00000571272 STKLD1Q8NE28 680 aa18.09■□□□□ 0.49
SCARF1-205ENST00000571272 WRNIP1Q96S55 665 aa18.09■□□□□ 0.49
SCARF1-205ENST00000571272 SHCBP1LQ9BZQ2 653 aa18.09■□□□□ 0.49
SCARF1-205ENST00000571272 SLC17A6Q9P2U8 582 aa18.09■□□□□ 0.49
SCARF1-205ENST00000571272 C2CD4BA6NLJ0 364 aa18.09■□□□□ 0.49
SCARF1-205ENST00000571272 TRDMT1O14717 391 aaKnown RBP18.09■□□□□ 0.49
SCARF1-205ENST00000571272 CCNFP41002 786 aa18.09■□□□□ 0.49
SCARF1-205ENST00000571272 CA9Q16790 459 aa18.09■□□□□ 0.49
SCARF1-205ENST00000571272 DNAL1Q4LDG9 190 aa18.09■□□□□ 0.49
SCARF1-205ENST00000571272 ATF7IP2Q5U623 682 aa18.09■□□□□ 0.49
SCARF1-205ENST00000571272 MPZL3Q6UWV2 235 aa18.09■□□□□ 0.49
SCARF1-205ENST00000571272 FAM183BPQ6ZVS7 135 aa18.09■□□□□ 0.49
SCARF1-205ENST00000571272 ADGRF2Q8IZF7 708 aa18.09■□□□□ 0.49
SCARF1-205ENST00000571272 GBP5Q96PP8 586 aa18.09■□□□□ 0.49
SCARF1-205ENST00000571272 BCO2Q9BYV7 579 aa18.09■□□□□ 0.49
SCARF1-205ENST00000571272 APOL1O14791 398 aa18.08■□□□□ 0.48
SCARF1-205ENST00000571272 ITM2AO43736 263 aa18.08■□□□□ 0.48
SCARF1-205ENST00000571272 B4GALT4O60513 344 aa18.08■□□□□ 0.48
SCARF1-205ENST00000571272 SNNO75324 88 aaPredicted RBP18.08■□□□□ 0.48
SCARF1-205ENST00000571272 CSDE1O75534 798 aaKnown RBP18.08■□□□□ 0.48
SCARF1-205ENST00000571272 METTL18O95568 372 aa18.08■□□□□ 0.48
SCARF1-205ENST00000571272 PTPRAP18433 802 aa18.08■□□□□ 0.48
SCARF1-205ENST00000571272 ACAP1Q15027 740 aa18.08■□□□□ 0.48
SCARF1-205ENST00000571272 PCDH19Q8TAB3 1148 aa18.08■□□□□ 0.48
SCARF1-205ENST00000571272 TRAPPC12Q8WVT3 735 aa18.08■□□□□ 0.48
SCARF1-205ENST00000571272 PYDC1Q8WXC3 89 aa18.08■□□□□ 0.48
SCARF1-205ENST00000571272 TUBGCP5Q96RT8 1024 aa18.08■□□□□ 0.48
SCARF1-205ENST00000571272 ECSITQ9BQ95 431 aa18.08■□□□□ 0.48
SCARF1-205ENST00000571272 XAB2Q9HCS7 855 aaKnown RBP18.08■□□□□ 0.48
SCARF1-205ENST00000571272 PICK1Q9NRD5 415 aa18.08■□□□□ 0.48
SCARF1-205ENST00000571272 ADAMTS5Q9UNA0 930 aa18.08■□□□□ 0.48
SCARF1-205ENST00000571272 NR2E3Q9Y5X4 410 aa18.08■□□□□ 0.48
SCARF1-205ENST00000571272 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.08■□□□□ 0.48
SCARF1-205ENST00000571272 SERPINA6P08185 405 aa18.08■□□□□ 0.48
SCARF1-205ENST00000571272 ICAM3P32942 547 aa18.08■□□□□ 0.48
SCARF1-205ENST00000571272 RPL10AP62906 217 aaKnown RBP18.08■□□□□ 0.48
SCARF1-205ENST00000571272 DEPDC1BQ8WUY9 529 aa18.08■□□□□ 0.48
SCARF1-205ENST00000571272 TRIM4Q9C037 500 aa18.08■□□□□ 0.48
SCARF1-205ENST00000571272 CILPO75339 1184 aa18.07■□□□□ 0.48
SCARF1-205ENST00000571272 SORBS2O94875 1100 aaKnown RBP18.07■□□□□ 0.48
SCARF1-205ENST00000571272 KCNA4P22459 653 aa18.07■□□□□ 0.48
SCARF1-205ENST00000571272 GABRB2P47870 512 aa18.07■□□□□ 0.48
SCARF1-205ENST00000571272 CDC16Q13042 620 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms