RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 DPYSL3Q14195 570 aa18.05■□□□□ 0.48
RPAIN-208ENST00000571043 TIGD5Q53EQ6 642 aa18.05■□□□□ 0.48
RPAIN-208ENST00000571043 AGBL2Q5U5Z8 902 aa18.05■□□□□ 0.48
RPAIN-208ENST00000571043 EMC10Q5UCC4 262 aa18.05■□□□□ 0.48
RPAIN-208ENST00000571043 IZUMO3Q5VZ72 239 aa18.05■□□□□ 0.48
RPAIN-208ENST00000571043 CROCCP2Q86T23 111 aa18.05■□□□□ 0.48
RPAIN-208ENST00000571043 FIBCD1Q8N539 461 aa18.05■□□□□ 0.48
RPAIN-208ENST00000571043 CLP1Q92989 425 aaKnown RBP18.05■□□□□ 0.48
RPAIN-208ENST00000571043 MED10Q9BTT4 135 aa18.05■□□□□ 0.48
RPAIN-208ENST00000571043 COLEC11Q9BWP8 271 aa18.05■□□□□ 0.48
RPAIN-208ENST00000571043 CALN1Q9BXU9 219 aa18.05■□□□□ 0.48
RPAIN-208ENST00000571043 PCDH9Q9HC56 1237 aa18.05■□□□□ 0.48
RPAIN-208ENST00000571043 CRTAC1Q9NQ79 661 aa18.05■□□□□ 0.48
RPAIN-208ENST00000571043 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.05■□□□□ 0.48
RPAIN-208ENST00000571043 KIAA1671Q9BY89 1806 aa18.05■□□□□ 0.48
RPAIN-208ENST00000571043 MYO9BQ13459 2157 aa18.05■□□□□ 0.48
RPAIN-208ENST00000571043 ARHGEF37A1IGU5 675 aa18.04■□□□□ 0.48
RPAIN-208ENST00000571043 CARNS1A5YM72 827 aa18.04■□□□□ 0.48
RPAIN-208ENST00000571043 GRXCR1A8MXD5 290 aa18.04■□□□□ 0.48
RPAIN-208ENST00000571043 CLDN5O00501 218 aa18.04■□□□□ 0.48
RPAIN-208ENST00000571043 DNALI1O14645 258 aaPredicted RBP18.04■□□□□ 0.48
RPAIN-208ENST00000571043 LINC00271P0C7V0 271 aa18.04■□□□□ 0.48
RPAIN-208ENST00000571043 DYNLT1P63172 113 aa18.04■□□□□ 0.48
RPAIN-208ENST00000571043 MRPS5P82675 430 aaKnown RBP18.04■□□□□ 0.48
RPAIN-208ENST00000571043 ADCY1Q08828 1119 aa18.04■□□□□ 0.48
RPAIN-208ENST00000571043 IFFO1Q0D2I5 559 aa18.04■□□□□ 0.48
RPAIN-208ENST00000571043 KRT81Q14533 505 aa18.04■□□□□ 0.48
RPAIN-208ENST00000571043 FAM109BQ6ICB4 259 aaPredicted RBP18.04■□□□□ 0.48
RPAIN-208ENST00000571043 HIBCHQ6NVY1 386 aaPredicted RBP18.04■□□□□ 0.48
RPAIN-208ENST00000571043 SCYL2Q6P3W7 929 aa18.04■□□□□ 0.48
RPAIN-208ENST00000571043 KCNT2Q6UVM3 1135 aa18.04■□□□□ 0.48
RPAIN-208ENST00000571043 CLEC20AQ6ZU45 233 aa18.04■□□□□ 0.48
RPAIN-208ENST00000571043 STRADAQ7RTN6 431 aa18.04■□□□□ 0.48
RPAIN-208ENST00000571043 METTL23Q86XA0 190 aa18.04■□□□□ 0.48
RPAIN-208ENST00000571043 OR2W6PQ8NHA6 318 aa18.04■□□□□ 0.48
RPAIN-208ENST00000571043 CLEC4CQ8WTT0 213 aa18.04■□□□□ 0.48
RPAIN-208ENST00000571043 HAUS1Q96CS2 278 aa18.04■□□□□ 0.48
RPAIN-208ENST00000571043 TMEM109Q9BVC6 243 aa18.04■□□□□ 0.48
RPAIN-208ENST00000571043 PRO3102Q9H379 93 aa18.04■□□□□ 0.48
RPAIN-208ENST00000571043 LRRC4Q9HBW1 653 aa18.04■□□□□ 0.48
RPAIN-208ENST00000571043 AAASQ9NRG9 546 aa18.04■□□□□ 0.48
RPAIN-208ENST00000571043 PRG3Q9Y2Y8 225 aaPredicted RBP18.04■□□□□ 0.48
RPAIN-208ENST00000571043 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.03■□□□□ 0.48
RPAIN-208ENST00000571043 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.03■□□□□ 0.48
RPAIN-208ENST00000571043 M0QZQ0 153 aa18.03■□□□□ 0.48
RPAIN-208ENST00000571043 DAB1O75553 588 aa18.03■□□□□ 0.48
RPAIN-208ENST00000571043 FBXO21O94952 628 aa18.03■□□□□ 0.48
RPAIN-208ENST00000571043 ITGB1P05556 798 aa18.03■□□□□ 0.48
RPAIN-208ENST00000571043 LAG3P18627 525 aa18.03■□□□□ 0.48
RPAIN-208ENST00000571043 MATKP42679 507 aa18.03■□□□□ 0.48
RPAIN-208ENST00000571043 VPS41P49754 854 aa18.03■□□□□ 0.48
RPAIN-208ENST00000571043 RABGGTBP53611 331 aa18.03■□□□□ 0.48
RPAIN-208ENST00000571043 RAB6CQ53S08 254 aa18.03■□□□□ 0.48
RPAIN-208ENST00000571043 SPOUT1Q5T280 376 aaKnown RBP18.03■□□□□ 0.48
RPAIN-208ENST00000571043 FAM35AQ86V20 835 aa18.03■□□□□ 0.48
RPAIN-208ENST00000571043 HOOK3Q86VS8 718 aa18.03■□□□□ 0.48
RPAIN-208ENST00000571043 RELL1Q8IUW5 271 aa18.03■□□□□ 0.48
RPAIN-208ENST00000571043 MYCBPAPQ8TBZ2 947 aa18.03■□□□□ 0.48
RPAIN-208ENST00000571043 RNF157Q96PX1 679 aa18.03■□□□□ 0.48
RPAIN-208ENST00000571043 ACBD6Q9BR61 282 aa18.03■□□□□ 0.48
RPAIN-208ENST00000571043 ZNF670Q9BS34 389 aa18.03■□□□□ 0.48
RPAIN-208ENST00000571043 SNRNP25Q9BV90 132 aaKnown RBP18.03■□□□□ 0.48
RPAIN-208ENST00000571043 RAB6CQ9H0N0 254 aa18.03■□□□□ 0.48
RPAIN-208ENST00000571043 SEMA4AQ9H3S1 761 aa18.03■□□□□ 0.48
RPAIN-208ENST00000571043 PCDH18Q9HCL0 1135 aa18.03■□□□□ 0.48
RPAIN-208ENST00000571043 NLRC5Q86WI3 1866 aa18.03■□□□□ 0.48
RPAIN-208ENST00000571043 LCHNA4D1U4 455 aa18.03■□□□□ 0.48
RPAIN-208ENST00000571043 A6NNZ2 444 aa18.03■□□□□ 0.48
RPAIN-208ENST00000571043 NT5C1B-RDH14C9J2C7 533 aa18.03■□□□□ 0.48
RPAIN-208ENST00000571043 F8W810 466 aa18.03■□□□□ 0.48
RPAIN-208ENST00000571043 MCF2LO15068 1137 aa18.03■□□□□ 0.48
RPAIN-208ENST00000571043 RIPK2O43353 540 aa18.03■□□□□ 0.48
RPAIN-208ENST00000571043 TADA2AO75478 443 aa18.03■□□□□ 0.48
RPAIN-208ENST00000571043 SKOR1P84550 965 aa18.03■□□□□ 0.48
RPAIN-208ENST00000571043 DMTNQ08495 405 aa18.03■□□□□ 0.48
RPAIN-208ENST00000571043 ADIGQ0VDE8 80 aa18.03■□□□□ 0.48
RPAIN-208ENST00000571043 P3H1Q32P28 736 aa18.03■□□□□ 0.48
RPAIN-208ENST00000571043 TUBB8Q3ZCM7 444 aa18.03■□□□□ 0.48
RPAIN-208ENST00000571043 ERMARDQ5T6L9 678 aa18.03■□□□□ 0.48
RPAIN-208ENST00000571043 TDHQ8IZJ6 230 aa18.03■□□□□ 0.48
RPAIN-208ENST00000571043 SIX6OS1Q8N1H7 587 aa18.03■□□□□ 0.48
RPAIN-208ENST00000571043 FAF2Q96CS3 445 aa18.03■□□□□ 0.48
RPAIN-208ENST00000571043 KRT82Q9NSB4 513 aa18.03■□□□□ 0.48
RPAIN-208ENST00000571043 MARCH5Q9NX47 278 aa18.03■□□□□ 0.48
RPAIN-208ENST00000571043 ADAM28Q9UKQ2 775 aa18.03■□□□□ 0.48
RPAIN-208ENST00000571043 TPX2Q9ULW0 747 aaKnown RBP18.03■□□□□ 0.48
RPAIN-208ENST00000571043 PCDHA11Q9Y5I1 949 aa18.03■□□□□ 0.48
RPAIN-208ENST00000571043 TIMM13Q9Y5L4 95 aaPredicted RBP18.03■□□□□ 0.48
RPAIN-208ENST00000571043 MYBPHLA2RUH7 354 aa18.02■□□□□ 0.47
RPAIN-208ENST00000571043 SGK1O00141 431 aa18.02■□□□□ 0.47
RPAIN-208ENST00000571043 BEST1O76090 585 aa18.02■□□□□ 0.47
RPAIN-208ENST00000571043 EFEMP2O95967 443 aa18.02■□□□□ 0.47
RPAIN-208ENST00000571043 TGM2P21980 687 aa18.02■□□□□ 0.47
RPAIN-208ENST00000571043 IL4RP24394 825 aa18.02■□□□□ 0.47
RPAIN-208ENST00000571043 CHKAP35790 457 aa18.02■□□□□ 0.47
RPAIN-208ENST00000571043 PBX3P40426 434 aa18.02■□□□□ 0.47
RPAIN-208ENST00000571043 LMAN1P49257 510 aa18.02■□□□□ 0.47
RPAIN-208ENST00000571043 EIF3EP60228 445 aaKnown RBP18.02■□□□□ 0.47
RPAIN-208ENST00000571043 YWHAZP63104 245 aaKnown RBP18.02■□□□□ 0.47
RPAIN-208ENST00000571043 SLC29A2Q14542 456 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms