RNA–Protein interactions for RNA: ENST00000570954.1

RPH3AL-206, Transcript of rabphilin 3A like (without C2 domains), human

TSL 4

Gene RPH3AL, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPH3AL-206	ENST00000570954	DDX23	Q9BUQ8	820 aa	Known RBP	12.82	□□□□□ -0.36
RPH3AL-206	ENST00000570954	SLC46A2	Q9BY10	475 aa		12.82	□□□□□ -0.36
RPH3AL-206	ENST00000570954	TSGA10	Q9BZW7	698 aa		12.82	□□□□□ -0.36
RPH3AL-206	ENST00000570954	DCLK3	Q9C098	648 aa		12.82	□□□□□ -0.36
RPH3AL-206	ENST00000570954	THAP2	Q9H0W7	228 aa		12.82	□□□□□ -0.36
RPH3AL-206	ENST00000570954	SMOC2	Q9H3U7	446 aa		12.82	□□□□□ -0.36
RPH3AL-206	ENST00000570954	NMUR1	Q9HB89	426 aa		12.82	□□□□□ -0.36
RPH3AL-206	ENST00000570954	TRPV4	Q9HBA0	871 aa		12.82	□□□□□ -0.36
RPH3AL-206	ENST00000570954	ZFP14	Q9HCL3	533 aa		12.82	□□□□□ -0.36
RPH3AL-206	ENST00000570954	METTL5	Q9NRN9	209 aa	Known RBP	12.82	□□□□□ -0.36
RPH3AL-206	ENST00000570954	TDP1	Q9NUW8	608 aa		12.82	□□□□□ -0.36
RPH3AL-206	ENST00000570954	MARCH2	Q9P0N8	246 aa		12.82	□□□□□ -0.36
RPH3AL-206	ENST00000570954	TJP2	Q9UDY2	1190 aa		12.82	□□□□□ -0.36
RPH3AL-206	ENST00000570954	SLC12A6	Q9UHW9	1150 aa		12.82	□□□□□ -0.36
RPH3AL-206	ENST00000570954	TMEM59L	Q9UK28	342 aa		12.82	□□□□□ -0.36
RPH3AL-206	ENST00000570954	LSM7	Q9UK45	103 aa	Known RBP	12.82	□□□□□ -0.36
RPH3AL-206	ENST00000570954	ARHGAP26	Q9UNA1	814 aa		12.82	□□□□□ -0.36
RPH3AL-206	ENST00000570954	ZNF510	Q9Y2H8	683 aa		12.82	□□□□□ -0.36
RPH3AL-206	ENST00000570954	PATJ	Q8NI35	1801 aa		12.82	□□□□□ -0.36
RPH3AL-206	ENST00000570954		A0A0A6YYK5	440 aa	Predicted RBP	12.81	□□□□□ -0.36
RPH3AL-206	ENST00000570954	C2orf78	A6NCI8	922 aa		12.81	□□□□□ -0.36
RPH3AL-206	ENST00000570954	COCH	O43405	550 aa		12.81	□□□□□ -0.36
RPH3AL-206	ENST00000570954	CCDC175	P0C221	793 aa		12.81	□□□□□ -0.36
RPH3AL-206	ENST00000570954	PDGFRA	P16234	1089 aa		12.81	□□□□□ -0.36
RPH3AL-206	ENST00000570954	GJA1	P17302	382 aa		12.81	□□□□□ -0.36
RPH3AL-206	ENST00000570954	GPD1	P21695	349 aa		12.81	□□□□□ -0.36
RPH3AL-206	ENST00000570954	PTPN9	P43378	593 aa		12.81	□□□□□ -0.36
RPH3AL-206	ENST00000570954	KIF5A	Q12840	1032 aa		12.81	□□□□□ -0.36
RPH3AL-206	ENST00000570954	SLC25A52	Q3SY17	297 aa		12.81	□□□□□ -0.36
RPH3AL-206	ENST00000570954	NUGGC	Q68CJ6	796 aa		12.81	□□□□□ -0.36
RPH3AL-206	ENST00000570954	RAD9B	Q6WBX8	426 aa		12.81	□□□□□ -0.36
RPH3AL-206	ENST00000570954	ARID3B	Q8IVW6	561 aa	Predicted RBP	12.81	□□□□□ -0.36
RPH3AL-206	ENST00000570954	ZDHHC14	Q8IZN3	488 aa		12.81	□□□□□ -0.36
RPH3AL-206	ENST00000570954	DEFB106A	Q8N104	65 aa		12.81	□□□□□ -0.36
RPH3AL-206	ENST00000570954	ARL14EP	Q8N8R7	260 aa	Predicted RBP	12.81	□□□□□ -0.36
RPH3AL-206	ENST00000570954	ING5	Q8WYH8	240 aa		12.81	□□□□□ -0.36
RPH3AL-206	ENST00000570954	RFFL	Q8WZ73	363 aa		12.81	□□□□□ -0.36
RPH3AL-206	ENST00000570954	NDRG1	Q92597	394 aa	Known RBP	12.81	□□□□□ -0.36
RPH3AL-206	ENST00000570954	EDEM1	Q92611	657 aa		12.81	□□□□□ -0.36
RPH3AL-206	ENST00000570954	PLD4	Q96BZ4	506 aa		12.81	□□□□□ -0.36
RPH3AL-206	ENST00000570954	PGAP3	Q96FM1	320 aa	Predicted RBP	12.81	□□□□□ -0.36
RPH3AL-206	ENST00000570954	ASB16	Q96NS5	453 aa		12.81	□□□□□ -0.36
RPH3AL-206	ENST00000570954	MCEE	Q96PE7	176 aa		12.81	□□□□□ -0.36
RPH3AL-206	ENST00000570954	CCSER2	Q9H7U1	834 aa		12.81	□□□□□ -0.36
RPH3AL-206	ENST00000570954	THG1L	Q9NWX6	298 aa	Known RBP	12.81	□□□□□ -0.36
RPH3AL-206	ENST00000570954	OSER1	Q9NX31	292 aa		12.81	□□□□□ -0.36
RPH3AL-206	ENST00000570954	CTTNBP2NL	Q9P2B4	639 aa		12.81	□□□□□ -0.36
RPH3AL-206	ENST00000570954	MYO1A	Q9UBC5	1043 aa		12.81	□□□□□ -0.36
RPH3AL-206	ENST00000570954	RASAL2	Q9UJF2	1139 aa		12.81	□□□□□ -0.36
RPH3AL-206	ENST00000570954	TLR6	Q9Y2C9	796 aa		12.81	□□□□□ -0.36
RPH3AL-206	ENST00000570954	TRANK1	O15050	2925 aa		12.8	□□□□□ -0.36
RPH3AL-206	ENST00000570954	TCRBV5S1A1T	A0A578	114 aa		12.8	□□□□□ -0.36
RPH3AL-206	ENST00000570954	C2CD4B	A6NLJ0	364 aa		12.8	□□□□□ -0.36
RPH3AL-206	ENST00000570954	BTNL10	A8MVZ5	291 aa		12.8	□□□□□ -0.36
RPH3AL-206	ENST00000570954	MYO1F	O00160	1098 aa		12.8	□□□□□ -0.36
RPH3AL-206	ENST00000570954	SLC9A3R1	O14745	358 aa	Predicted RBP	12.8	□□□□□ -0.36
RPH3AL-206	ENST00000570954	CCP110	O43303	1012 aa		12.8	□□□□□ -0.36
RPH3AL-206	ENST00000570954	KRT86	O43790	486 aa		12.8	□□□□□ -0.36
RPH3AL-206	ENST00000570954	ECI2	O75521	394 aa		12.8	□□□□□ -0.36
RPH3AL-206	ENST00000570954	GRAP2	O75791	330 aa		12.8	□□□□□ -0.36
RPH3AL-206	ENST00000570954	RNF8	O76064	485 aa		12.8	□□□□□ -0.36
RPH3AL-206	ENST00000570954	TRUB2	O95900	331 aa	Known RBP	12.8	□□□□□ -0.36
RPH3AL-206	ENST00000570954	ARHGAP25	P42331	645 aa		12.8	□□□□□ -0.36
RPH3AL-206	ENST00000570954	HARS2	P49590	506 aa	Known RBP	12.8	□□□□□ -0.36
RPH3AL-206	ENST00000570954	VAV2	P52735	878 aa		12.8	□□□□□ -0.36
RPH3AL-206	ENST00000570954	ZNF143	P52747	638 aa	Predicted RBP	12.8	□□□□□ -0.36
RPH3AL-206	ENST00000570954	RING1	Q06587	406 aa		12.8	□□□□□ -0.36
RPH3AL-206	ENST00000570954	EFEMP1	Q12805	493 aa		12.8	□□□□□ -0.36
RPH3AL-206	ENST00000570954	PIGH	Q14442	188 aa	Predicted RBP	12.8	□□□□□ -0.36
RPH3AL-206	ENST00000570954	TCEAL1	Q15170	157 aa		12.8	□□□□□ -0.36
RPH3AL-206	ENST00000570954	C2CD6	Q53TS8	623 aa		12.8	□□□□□ -0.36
RPH3AL-206	ENST00000570954	PPP1R15B	Q5SWA1	713 aa		12.8	□□□□□ -0.36
RPH3AL-206	ENST00000570954	CC2D1A	Q6P1N0	951 aa	Predicted RBP	12.8	□□□□□ -0.36
RPH3AL-206	ENST00000570954	HFE2	Q6ZVN8	426 aa		12.8	□□□□□ -0.36
RPH3AL-206	ENST00000570954	STRADA	Q7RTN6	431 aa		12.8	□□□□□ -0.36
RPH3AL-206	ENST00000570954	ADHFE1	Q8IWW8	467 aa		12.8	□□□□□ -0.36
RPH3AL-206	ENST00000570954	DEPDC1B	Q8WUY9	529 aa		12.8	□□□□□ -0.36
RPH3AL-206	ENST00000570954	UBE2Q2	Q8WVN8	375 aa		12.8	□□□□□ -0.36
RPH3AL-206	ENST00000570954	NT5C3B	Q969T7	300 aa		12.8	□□□□□ -0.36
RPH3AL-206	ENST00000570954	ELSPBP1	Q96BH3	223 aa		12.8	□□□□□ -0.36
RPH3AL-206	ENST00000570954	CNPY3	Q9BT09	278 aa		12.8	□□□□□ -0.36
RPH3AL-206	ENST00000570954	NUP85	Q9BW27	656 aa		12.8	□□□□□ -0.36
RPH3AL-206	ENST00000570954	FAM204A	Q9H8W3	233 aa		12.8	□□□□□ -0.36
RPH3AL-206	ENST00000570954	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	12.8	□□□□□ -0.36	3e-6	■■■■■ 28.6
RPH3AL-206	ENST00000570954	IGSF9	Q9P2J2	1179 aa		12.8	□□□□□ -0.36
RPH3AL-206	ENST00000570954	TBC1D14	Q9P2M4	693 aa		12.8	□□□□□ -0.36
RPH3AL-206	ENST00000570954	IP6K2	Q9UHH9	426 aa		12.8	□□□□□ -0.36
RPH3AL-206	ENST00000570954	NAALADL1	Q9UQQ1	740 aa		12.8	□□□□□ -0.36
RPH3AL-206	ENST00000570954	SH3BP1	Q9Y3L3	701 aa		12.8	□□□□□ -0.36
RPH3AL-206	ENST00000570954	SLC12A8	A0AV02	714 aa		12.79	□□□□□ -0.36
RPH3AL-206	ENST00000570954	E2F8	A0AVK6	867 aa		12.79	□□□□□ -0.36
RPH3AL-206	ENST00000570954	TMEM191C	A6NGB0	347 aa		12.79	□□□□□ -0.36
RPH3AL-206	ENST00000570954	LATS1	O95835	1130 aa		12.79	□□□□□ -0.36
RPH3AL-206	ENST00000570954	APOE	P02649	317 aa		12.79	□□□□□ -0.36
RPH3AL-206	ENST00000570954	CCR1	P32246	355 aa		12.79	□□□□□ -0.36
RPH3AL-206	ENST00000570954	RDX	P35241	583 aa	Known RBP	12.79	□□□□□ -0.36
RPH3AL-206	ENST00000570954	RFC1	P35251	1148 aa	Predicted RBP	12.79	□□□□□ -0.36
RPH3AL-206	ENST00000570954	SULT1E1	P49888	294 aa		12.79	□□□□□ -0.36
RPH3AL-206	ENST00000570954	AIF1	P55008	147 aa		12.79	□□□□□ -0.36
RPH3AL-206	ENST00000570954	CCZ1B	P86790	482 aa		12.79	□□□□□ -0.36

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