RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 HIC2Q96JB3 615 aa7.65□□□□□ -1.18
SMG6-205ENST00000570659 SLC6A18Q96N87 628 aa7.65□□□□□ -1.18
SMG6-205ENST00000570659 FAM213AQ9BRX8 229 aa7.65□□□□□ -1.18
SMG6-205ENST00000570659 STRA6Q9BX79 667 aa7.65□□□□□ -1.18
SMG6-205ENST00000570659 BBS2Q9BXC9 721 aa7.65□□□□□ -1.18
SMG6-205ENST00000570659 KLF16Q9BXK1 252 aaPredicted RBP7.65□□□□□ -1.18
SMG6-205ENST00000570659 BRMS1Q9HCU9 246 aa7.65□□□□□ -1.18
SMG6-205ENST00000570659 MYO9AB2RTY4 2548 aa7.64□□□□□ -1.19
SMG6-205ENST00000570659 A0A1B0GTQ1 180 aa7.64□□□□□ -1.19
SMG6-205ENST00000570659 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.64□□□□□ -1.19
SMG6-205ENST00000570659 C10orf142B7Z368 130 aa7.64□□□□□ -1.19
SMG6-205ENST00000570659 TERTO14746 1132 aaKnown RBP7.64□□□□□ -1.19
SMG6-205ENST00000570659 EFSO43281 561 aa7.64□□□□□ -1.19
SMG6-205ENST00000570659 HUS1O60921 280 aa7.64□□□□□ -1.19
SMG6-205ENST00000570659 MPOP05164 745 aa7.64□□□□□ -1.19
SMG6-205ENST00000570659 GRK6P43250 576 aa7.64□□□□□ -1.19
SMG6-205ENST00000570659 SMTNP53814 917 aa7.64□□□□□ -1.19
SMG6-205ENST00000570659 MFAP3P55082 362 aa7.64□□□□□ -1.19
SMG6-205ENST00000570659 ORC1Q13415 861 aa7.64□□□□□ -1.19
SMG6-205ENST00000570659 KCNJ12Q14500 433 aa7.64□□□□□ -1.19
SMG6-205ENST00000570659 ZNF234Q14588 700 aa7.64□□□□□ -1.19
SMG6-205ENST00000570659 Q6ZNB5 142 aa7.64□□□□□ -1.19
SMG6-205ENST00000570659 LRRC69Q6ZNQ3 347 aa7.64□□□□□ -1.19
SMG6-205ENST00000570659 METTL3Q86U44 580 aaKnown RBP7.64□□□□□ -1.19
SMG6-205ENST00000570659 BRSK2Q8IWQ3 736 aa7.64□□□□□ -1.19
SMG6-205ENST00000570659 CD302Q8IX05 232 aa7.64□□□□□ -1.19
SMG6-205ENST00000570659 MYCT1Q8N699 235 aa7.64□□□□□ -1.19
SMG6-205ENST00000570659 EID2Q8N6I1 236 aa7.64□□□□□ -1.19
SMG6-205ENST00000570659 TOP6BLQ8N6T0 577 aa7.64□□□□□ -1.19
SMG6-205ENST00000570659 CADM4Q8NFZ8 388 aa7.64□□□□□ -1.19
SMG6-205ENST00000570659 MYCBPAPQ8TBZ2 947 aa7.64□□□□□ -1.19
SMG6-205ENST00000570659 KCNV2Q8TDN2 545 aa7.64□□□□□ -1.19
SMG6-205ENST00000570659 SAP25Q8TEE9 199 aa7.64□□□□□ -1.19
SMG6-205ENST00000570659 FGF11Q92914 225 aa7.64□□□□□ -1.19
SMG6-205ENST00000570659 CNDP2Q96KP4 475 aaKnown RBP7.64□□□□□ -1.19
SMG6-205ENST00000570659 C8orf48Q96LL4 319 aa7.64□□□□□ -1.19
SMG6-205ENST00000570659 CBWD1Q9BRT8 395 aa7.64□□□□□ -1.19
SMG6-205ENST00000570659 SDCBP2Q9H190 292 aa7.64□□□□□ -1.19
SMG6-205ENST00000570659 NMUR1Q9HB89 426 aa7.64□□□□□ -1.19
SMG6-205ENST00000570659 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.64□□□□□ -1.19
SMG6-205ENST00000570659 MARK1Q9P0L2 795 aa7.64□□□□□ -1.19
SMG6-205ENST00000570659 THAP10Q9P2Z0 257 aaPredicted RBP7.64□□□□□ -1.19
SMG6-205ENST00000570659 MAGEC2Q9UBF1 373 aaPredicted RBP7.64□□□□□ -1.19
SMG6-205ENST00000570659 FTSJ1Q9UET6 329 aa7.64□□□□□ -1.19
SMG6-205ENST00000570659 FBXO10Q9UK96 956 aa7.64□□□□□ -1.19
SMG6-205ENST00000570659 SSUH2Q9Y2M2 353 aa7.64□□□□□ -1.19
SMG6-205ENST00000570659 LRRK2Q5S007 2527 aa7.63□□□□□ -1.19
SMG6-205ENST00000570659 TLN1Q9Y490 2541 aaKnown RBP7.63□□□□□ -1.19
SMG6-205ENST00000570659 ANKRD17O75179 2603 aaKnown RBP7.63□□□□□ -1.19
SMG6-205ENST00000570659 USP9YO00507 2555 aaPredicted RBP7.63□□□□□ -1.19
SMG6-205ENST00000570659 SLC9A3R1O14745 358 aaPredicted RBP7.63□□□□□ -1.19
SMG6-205ENST00000570659 TSPAN3O60637 253 aa7.63□□□□□ -1.19
SMG6-205ENST00000570659 RFPL3O75679 317 aa7.63□□□□□ -1.19
SMG6-205ENST00000570659 CST3P01034 146 aaPredicted RBP7.63□□□□□ -1.19
SMG6-205ENST00000570659 KRT19P08727 400 aa7.63□□□□□ -1.19
SMG6-205ENST00000570659 WARSP23381 471 aaKnown RBP7.63□□□□□ -1.19
SMG6-205ENST00000570659 DDIT3P35638 169 aa7.63□□□□□ -1.19
SMG6-205ENST00000570659 DGKGP49619 791 aa7.63□□□□□ -1.19
SMG6-205ENST00000570659 CCT8P50990 548 aa7.63□□□□□ -1.19
SMG6-205ENST00000570659 MYL7Q01449 175 aa7.63□□□□□ -1.19
SMG6-205ENST00000570659 C1QBPQ07021 282 aaKnown RBP7.63□□□□□ -1.19
SMG6-205ENST00000570659 LINC00303Q3SY05 128 aa7.63□□□□□ -1.19
SMG6-205ENST00000570659 PKDCCQ504Y2 493 aa7.63□□□□□ -1.19
SMG6-205ENST00000570659 FYB2Q5VWT5 728 aa7.63□□□□□ -1.19
SMG6-205ENST00000570659 KRT79Q5XKE5 535 aa7.63□□□□□ -1.19
SMG6-205ENST00000570659 VSTM1Q6UX27 236 aa7.63□□□□□ -1.19
SMG6-205ENST00000570659 KDM7AQ6ZMT4 941 aa7.63□□□□□ -1.19
SMG6-205ENST00000570659 PRICKLE2Q7Z3G6 844 aa7.63□□□□□ -1.19
SMG6-205ENST00000570659 SFR1Q86XK3 245 aa7.63□□□□□ -1.19
SMG6-205ENST00000570659 WASF1Q92558 559 aa7.63□□□□□ -1.19
SMG6-205ENST00000570659 IGSF8Q969P0 613 aa7.63□□□□□ -1.19
SMG6-205ENST00000570659 FBXO32Q969P5 355 aa7.63□□□□□ -1.19
SMG6-205ENST00000570659 SIPA1Q96FS4 1042 aa7.63□□□□□ -1.19
SMG6-205ENST00000570659 PIWIL1Q96J94 861 aaKnown RBP7.63□□□□□ -1.19
SMG6-205ENST00000570659 ZNF560Q96MR9 790 aa7.63□□□□□ -1.19
SMG6-205ENST00000570659 TSPAN18Q96SJ8 248 aa7.63□□□□□ -1.19
SMG6-205ENST00000570659 NRSN2Q9GZP1 204 aa7.63□□□□□ -1.19
SMG6-205ENST00000570659 PCIF1Q9H4Z3 704 aa7.63□□□□□ -1.19
SMG6-205ENST00000570659 IL37Q9NZH6 218 aa7.63□□□□□ -1.19
SMG6-205ENST00000570659 HSPBP1Q9NZL4 362 aa7.63□□□□□ -1.19
SMG6-205ENST00000570659 TBC1D7Q9P0N9 293 aa7.63□□□□□ -1.19
SMG6-205ENST00000570659 HMGXB4Q9UGU5 601 aa7.63□□□□□ -1.19
SMG6-205ENST00000570659 IL17BQ9UHF5 180 aa7.63□□□□□ -1.19
SMG6-205ENST00000570659 NFE2L3Q9Y4A8 694 aa7.63□□□□□ -1.19
SMG6-205ENST00000570659 SPENQ96T58 3664 aaKnown RBP7.62□□□□□ -1.19
SMG6-205ENST00000570659 A0A1W2PR77 199 aa7.62□□□□□ -1.19
SMG6-205ENST00000570659 VWA3AA6NCI4 1184 aa7.62□□□□□ -1.19
SMG6-205ENST00000570659 E9PAM4 449 aa7.62□□□□□ -1.19
SMG6-205ENST00000570659 TRIM38O00635 465 aa7.62□□□□□ -1.19
SMG6-205ENST00000570659 CAPN9O14815 690 aa7.62□□□□□ -1.19
SMG6-205ENST00000570659 RRP8O43159 456 aaKnown RBP7.62□□□□□ -1.19
SMG6-205ENST00000570659 CYP26A1O43174 497 aa7.62□□□□□ -1.19
SMG6-205ENST00000570659 PAPSS1O43252 624 aaPredicted RBP7.62□□□□□ -1.19
SMG6-205ENST00000570659 FSBPO95073 299 aa7.62□□□□□ -1.19
SMG6-205ENST00000570659 PFKLP17858 780 aa7.62□□□□□ -1.19
SMG6-205ENST00000570659 PTPN1P18031 435 aaKnown RBP7.62□□□□□ -1.19
SMG6-205ENST00000570659 YWHAQP27348 245 aa7.62□□□□□ -1.19
SMG6-205ENST00000570659 HOXD13P35453 343 aa7.62□□□□□ -1.19
SMG6-205ENST00000570659 GRIA4P48058 902 aa7.62□□□□□ -1.19
SMG6-205ENST00000570659 AFF3P51826 1226 aaKnown RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms