RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 LRRC23Q53EV4 343 aaPredicted RBP8.38□□□□□ -1.07
TCF4-246ENST00000570287 CCBE1Q6UXH8 406 aaPredicted RBP8.38□□□□□ -1.07
TCF4-246ENST00000570287 ADAMTSL4Q6UY14 1074 aa8.38□□□□□ -1.07
TCF4-246ENST00000570287 RNF207Q6ZRF8 634 aa8.38□□□□□ -1.07
TCF4-246ENST00000570287 CCDC80Q76M96 950 aa8.38□□□□□ -1.07
TCF4-246ENST00000570287 MAEAQ7L5Y9 396 aa8.38□□□□□ -1.07
TCF4-246ENST00000570287 ZNF227Q86WZ6 799 aa8.38□□□□□ -1.07
TCF4-246ENST00000570287 MAP4K3Q8IVH8 894 aa8.38□□□□□ -1.07
TCF4-246ENST00000570287 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.38□□□□□ -1.07
TCF4-246ENST00000570287 XXYLT1Q8NBI6 393 aa8.38□□□□□ -1.07
TCF4-246ENST00000570287 APPL2Q8NEU8 664 aa8.38□□□□□ -1.07
TCF4-246ENST00000570287 RDM1Q8NG50 284 aa8.38□□□□□ -1.07
TCF4-246ENST00000570287 DIO2Q92813 273 aa8.38□□□□□ -1.07
TCF4-246ENST00000570287 KIFAP3Q92845 792 aa8.38□□□□□ -1.07
TCF4-246ENST00000570287 IFT74Q96LB3 600 aa8.38□□□□□ -1.07
TCF4-246ENST00000570287 PDCD2LQ9BRP1 358 aa8.38□□□□□ -1.07
TCF4-246ENST00000570287 CEP44Q9C0F1 390 aa8.38□□□□□ -1.07
TCF4-246ENST00000570287 BRD9Q9H8M2 597 aa8.38□□□□□ -1.07
TCF4-246ENST00000570287 RNPEPL1Q9HAU8 725 aa8.38□□□□□ -1.07
TCF4-246ENST00000570287 PXMP2Q9NR77 195 aa8.38□□□□□ -1.07
TCF4-246ENST00000570287 ZMAT5Q9UDW3 170 aaKnown RBP8.38□□□□□ -1.07
TCF4-246ENST00000570287 PCDHGB2Q9Y5G2 931 aa8.38□□□□□ -1.07
TCF4-246ENST00000570287 GOLGB1Q14789 3259 aaKnown RBP8.38□□□□□ -1.07
TCF4-246ENST00000570287 RASA4BC9J798 803 aa8.38□□□□□ -1.07
TCF4-246ENST00000570287 PGRMC1O00264 195 aaKnown RBP8.38□□□□□ -1.07
TCF4-246ENST00000570287 RASA4O43374 803 aa8.38□□□□□ -1.07
TCF4-246ENST00000570287 IGFALSP35858 605 aa8.38□□□□□ -1.07
TCF4-246ENST00000570287 LACTBP83111 547 aaPredicted RBP8.38□□□□□ -1.07
TCF4-246ENST00000570287 SPP2Q13103 211 aa8.38□□□□□ -1.07
TCF4-246ENST00000570287 ACAP2Q15057 778 aa8.38□□□□□ -1.07
TCF4-246ENST00000570287 INTS11Q5TA45 600 aaKnown RBP8.38□□□□□ -1.07
TCF4-246ENST00000570287 HAUS6Q7Z4H7 955 aa8.38□□□□□ -1.07
TCF4-246ENST00000570287 STON2Q8WXE9 905 aa8.38□□□□□ -1.07
TCF4-246ENST00000570287 RFFLQ8WZ73 363 aa8.38□□□□□ -1.07
TCF4-246ENST00000570287 UTP4Q969X6 686 aaKnown RBP8.38□□□□□ -1.07
TCF4-246ENST00000570287 ATG4CQ96DT6 458 aa8.38□□□□□ -1.07
TCF4-246ENST00000570287 TEKT5Q96M29 485 aa8.38□□□□□ -1.07
TCF4-246ENST00000570287 RMDN3Q96TC7 470 aa8.38□□□□□ -1.07
TCF4-246ENST00000570287 NUDT16L1Q9BRJ7 211 aaKnown RBP8.38□□□□□ -1.07
TCF4-246ENST00000570287 NIFKQ9BYG3 293 aaKnown RBP8.38□□□□□ -1.07
TCF4-246ENST00000570287 RXFP1Q9HBX9 757 aa8.38□□□□□ -1.07
TCF4-246ENST00000570287 USP15Q9Y4E8 981 aaPredicted RBP8.38□□□□□ -1.07
TCF4-246ENST00000570287 EMSYQ7Z589 1322 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 SIGLEC16A6NMB1 481 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 CEP104O60308 925 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 EDN3P14138 238 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 MAGEA10P43363 369 aaPredicted RBP8.37□□□□□ -1.07
TCF4-246ENST00000570287 RANBP1P43487 201 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 BAG6P46379 1132 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 PDE6CP51160 858 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 CTAG1AP78358 180 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 KLC1Q07866 573 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 PRSS53Q2L4Q9 553 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 TMEM240Q5SV17 173 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 ARHGEF16Q5VV41 709 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 DAAM2Q86T65 1068 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 NT5DC3Q86UY8 548 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 HOOK3Q86VS8 718 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 DNAAF5Q86Y56 855 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 RASGEF1CQ8N431 466 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 METTL13Q8N6R0 699 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 DIS3LQ8TF46 1054 aaKnown RBP8.37□□□□□ -1.07
TCF4-246ENST00000570287 CTNNBL1Q8WYA6 563 aaPredicted RBP8.37□□□□□ -1.07
TCF4-246ENST00000570287 SLC35B4Q969S0 331 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 KLHL29Q96CT2 875 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 HES6Q96HZ4 224 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 MENTQ9BUN1 341 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 TMEM109Q9BVC6 243 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 TRIM4Q9C037 500 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 NSRP1Q9H0G5 558 aaKnown RBP8.37□□□□□ -1.07
TCF4-246ENST00000570287 PCIF1Q9H4Z3 704 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 DMAP1Q9NPF5 467 aaPredicted RBP8.37□□□□□ -1.07
TCF4-246ENST00000570287 C11orf16Q9NQ32 467 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 HSPBP1Q9NZL4 362 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 NKX1-2Q9UD57 310 aaPredicted RBP8.37□□□□□ -1.07
TCF4-246ENST00000570287 AMFRQ9UKV5 643 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 C9IYK1 514 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 CCDC188H7C350 402 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 VWA5AO00534 786 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 PEX11AO75192 247 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 MSL3P1P0C860 447 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 TPBGLP0DKB5 382 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 MYCLP12524 364 aaPredicted RBP8.37□□□□□ -1.07
TCF4-246ENST00000570287 CKMT1AP12532 417 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 TNFSF4P23510 183 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 PFKPQ01813 784 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 MYBPC3Q14896 1274 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 SMAD1Q15797 465 aaKnown RBP8.37□□□□□ -1.07
TCF4-246ENST00000570287 ARHGAP44Q17R89 818 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 KRT71Q3SY84 523 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 EPC2Q52LR7 807 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 IRGCQ6NXR0 463 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 RTL10Q7L3V2 364 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 FASTKD5Q7L8L6 764 aaKnown RBP8.37□□□□□ -1.07
TCF4-246ENST00000570287 PLD6Q8N2A8 252 aaKnown RBP8.37□□□□□ -1.07
TCF4-246ENST00000570287 CBWD1Q9BRT8 395 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 UBE2OQ9C0C9 1292 aaKnown RBP8.37□□□□□ -1.07
TCF4-246ENST00000570287 CERS4Q9HA82 394 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 C1orf112Q9NSG2 853 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 CYP39A1Q9NYL5 469 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms