RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 CCNT2O60583 730 aaKnown RBP4.23□□□□□ -1.73
UBR1-211ENST00000569971 ERN1O75460 977 aaKnown RBP4.23□□□□□ -1.73
UBR1-211ENST00000569971 ZNF202O95125 648 aa4.23□□□□□ -1.73
UBR1-211ENST00000569971 GPANK1O95872 356 aa4.23□□□□□ -1.73
UBR1-211ENST00000569971 ELANEP08246 267 aa4.23□□□□□ -1.73
UBR1-211ENST00000569971 ITGALP20701 1170 aa4.23□□□□□ -1.73
UBR1-211ENST00000569971 YY1P25490 414 aa4.23□□□□□ -1.73
UBR1-211ENST00000569971 NTSR1P30989 418 aa4.23□□□□□ -1.73
UBR1-211ENST00000569971 NDUFV1P49821 464 aa4.23□□□□□ -1.73
UBR1-211ENST00000569971 ANXA11P50995 505 aaKnown RBP4.23□□□□□ -1.73
UBR1-211ENST00000569971 SCNN1GP51170 649 aa4.23□□□□□ -1.73
UBR1-211ENST00000569971 ALDH18A1P54886 795 aaKnown RBP4.23□□□□□ -1.73
UBR1-211ENST00000569971 AP2B1P63010 937 aa4.23□□□□□ -1.73
UBR1-211ENST00000569971 TAP2Q03519 686 aa4.23□□□□□ -1.73
UBR1-211ENST00000569971 OCA2Q04671 838 aa4.23□□□□□ -1.73
UBR1-211ENST00000569971 FPGSQ05932 587 aa4.23□□□□□ -1.73
UBR1-211ENST00000569971 SCAPQ12770 1279 aa4.23□□□□□ -1.73
UBR1-211ENST00000569971 FOXD4Q12950 439 aaPredicted RBP4.23□□□□□ -1.73
UBR1-211ENST00000569971 FHL3Q13643 280 aa4.23□□□□□ -1.73
UBR1-211ENST00000569971 ATP1A4Q13733 1029 aa4.23□□□□□ -1.73
UBR1-211ENST00000569971 GRM4Q14833 912 aa4.23□□□□□ -1.73
UBR1-211ENST00000569971 CD300EQ496F6 205 aaPredicted RBP4.23□□□□□ -1.73
UBR1-211ENST00000569971 PDCD4Q53EL6 469 aaKnown RBP4.23□□□□□ -1.73
UBR1-211ENST00000569971 USP39Q53GS9 565 aaKnown RBP4.23□□□□□ -1.73
UBR1-211ENST00000569971 ATPAF1Q5TC12 328 aaPredicted RBP4.23□□□□□ -1.73
UBR1-211ENST00000569971 ARHGAP40Q5TG30 622 aa4.23□□□□□ -1.73
UBR1-211ENST00000569971 ABLIM2Q6H8Q1 611 aa4.23□□□□□ -1.73
UBR1-211ENST00000569971 RGS7BPQ6MZT1 257 aaPredicted RBP4.23□□□□□ -1.73
UBR1-211ENST00000569971 RETSATQ6NUM9 610 aa4.23□□□□□ -1.73
UBR1-211ENST00000569971 Q6ZRM9 215 aa4.23□□□□□ -1.73
UBR1-211ENST00000569971 C2CD5Q86YS7 1000 aa4.23□□□□□ -1.73
UBR1-211ENST00000569971 TMTC1Q8IUR5 882 aa4.23□□□□□ -1.73
UBR1-211ENST00000569971 CPOQ8IVL8 374 aa4.23□□□□□ -1.73
UBR1-211ENST00000569971 SLC30A5Q8TAD4 765 aa4.23□□□□□ -1.73
UBR1-211ENST00000569971 GRAMD1AQ96CP6 724 aa4.23□□□□□ -1.73
UBR1-211ENST00000569971 CHFRQ96EP1 664 aa4.23□□□□□ -1.73
UBR1-211ENST00000569971 MAELQ96JY0 434 aaKnown RBP4.23□□□□□ -1.73
UBR1-211ENST00000569971 TESK2Q96S53 571 aa4.23□□□□□ -1.73
UBR1-211ENST00000569971 PYM1Q9BRP8 204 aaKnown RBP4.23□□□□□ -1.73
UBR1-211ENST00000569971 GPR87Q9BY21 358 aa4.23□□□□□ -1.73
UBR1-211ENST00000569971 HELLSQ9NRZ9 838 aa4.23□□□□□ -1.73
UBR1-211ENST00000569971 DNAJB11Q9UBS4 358 aa4.23□□□□□ -1.73
UBR1-211ENST00000569971 EIF2B4Q9UI10 523 aaKnown RBP4.23□□□□□ -1.73
UBR1-211ENST00000569971 SSX2IPQ9Y2D8 614 aa4.23□□□□□ -1.73
UBR1-211ENST00000569971 KNSTRNQ9Y448 316 aa4.23□□□□□ -1.73
UBR1-211ENST00000569971 DISP3Q9P2K9 1392 aa4.23□□□□□ -1.73
UBR1-211ENST00000569971 KAT6BQ8WYB5 2073 aa4.23□□□□□ -1.73
UBR1-211ENST00000569971 MYOM2P54296 1465 aa4.23□□□□□ -1.73
UBR1-211ENST00000569971 KIF1BO60333 1816 aa4.23□□□□□ -1.73
UBR1-211ENST00000569971 FER1L4A9Z1Z3 1794 aa4.22□□□□□ -1.73
UBR1-211ENST00000569971 CD109Q6YHK3 1445 aa4.22□□□□□ -1.73
UBR1-211ENST00000569971 MAP3K4Q9Y6R4 1608 aa4.22□□□□□ -1.73
UBR1-211ENST00000569971 PNMA6EA0A0J9YXQ4 647 aa4.22□□□□□ -1.73
UBR1-211ENST00000569971 OR2W5A6NFC9 320 aa4.22□□□□□ -1.73
UBR1-211ENST00000569971 GOLGA6L6A8MZA4 724 aa4.22□□□□□ -1.73
UBR1-211ENST00000569971 H0Y3Z8 333 aa4.22□□□□□ -1.73
UBR1-211ENST00000569971 J3KTA2 159 aa4.22□□□□□ -1.73
UBR1-211ENST00000569971 AGPSO00116 658 aa4.22□□□□□ -1.73
UBR1-211ENST00000569971 ZSCAN9O15535 394 aaPredicted RBP4.22□□□□□ -1.73
UBR1-211ENST00000569971 SOAT2O75908 522 aa4.22□□□□□ -1.73
UBR1-211ENST00000569971 ZFPL1O95159 310 aa4.22□□□□□ -1.73
UBR1-211ENST00000569971 VIPP01282 170 aa4.22□□□□□ -1.73
UBR1-211ENST00000569971 CSF1RP07333 972 aa4.22□□□□□ -1.73
UBR1-211ENST00000569971 BDNFP23560 247 aa4.22□□□□□ -1.73
UBR1-211ENST00000569971 ACRV1P26436 265 aa4.22□□□□□ -1.73
UBR1-211ENST00000569971 ADORA2AP29274 412 aa4.22□□□□□ -1.73
UBR1-211ENST00000569971 PRKAR1BP31321 381 aa4.22□□□□□ -1.73
UBR1-211ENST00000569971 SLC5A2P31639 672 aa4.22□□□□□ -1.73
UBR1-211ENST00000569971 AKT1P31749 480 aa4.22□□□□□ -1.73
UBR1-211ENST00000569971 UQCRC1P31930 480 aa4.22□□□□□ -1.73
UBR1-211ENST00000569971 AARSP49588 968 aaKnown RBP eCLIP4.22□□□□□ -1.73
UBR1-211ENST00000569971 GATMP50440 423 aa4.22□□□□□ -1.73
UBR1-211ENST00000569971 TUBP50607 506 aa4.22□□□□□ -1.73
UBR1-211ENST00000569971 INHBCP55103 352 aa4.22□□□□□ -1.73
UBR1-211ENST00000569971 GPS1Q13098 491 aa4.22□□□□□ -1.73
UBR1-211ENST00000569971 DYRK1AQ13627 763 aa4.22□□□□□ -1.73
UBR1-211ENST00000569971 E2F2Q14209 437 aa4.22□□□□□ -1.73
UBR1-211ENST00000569971 BTBD16Q32M84 506 aa4.22□□□□□ -1.73
UBR1-211ENST00000569971 VPS53Q5VIR6 699 aa4.22□□□□□ -1.73
UBR1-211ENST00000569971 NAIF1Q69YI7 327 aaPredicted RBP4.22□□□□□ -1.73
UBR1-211ENST00000569971 RINT1Q6NUQ1 792 aa4.22□□□□□ -1.73
UBR1-211ENST00000569971 MAMDC4Q6UXC1 1216 aa4.22□□□□□ -1.73
UBR1-211ENST00000569971 Q6ZSN1 163 aa4.22□□□□□ -1.73
UBR1-211ENST00000569971 CLNKQ7Z7G1 428 aa4.22□□□□□ -1.73
UBR1-211ENST00000569971 LRRTM4Q86VH4 590 aa4.22□□□□□ -1.73
UBR1-211ENST00000569971 ZNF575Q86XF7 245 aa4.22□□□□□ -1.73
UBR1-211ENST00000569971 MAPKAPK5Q8IW41 473 aa4.22□□□□□ -1.73
UBR1-211ENST00000569971 NRSN1Q8IZ57 195 aa4.22□□□□□ -1.73
UBR1-211ENST00000569971 ZNF808Q8N4W9 903 aaPredicted RBP4.22□□□□□ -1.73
UBR1-211ENST00000569971 ESX1Q8N693 406 aa4.22□□□□□ -1.73
UBR1-211ENST00000569971 PLEKHG4BQ96PX9 1271 aa4.22□□□□□ -1.73
UBR1-211ENST00000569971 TRAPPC9Q96Q05 1148 aa4.22□□□□□ -1.73
UBR1-211ENST00000569971 HIST1H2AAQ96QV6 131 aa4.22□□□□□ -1.73
UBR1-211ENST00000569971 SEC62Q99442 399 aaKnown RBP4.22□□□□□ -1.73
UBR1-211ENST00000569971 PANK3Q9H999 370 aa4.22□□□□□ -1.73
UBR1-211ENST00000569971 SEPSECSQ9HD40 501 aaKnown RBP4.22□□□□□ -1.73
UBR1-211ENST00000569971 FSCN3Q9NQT6 498 aa4.22□□□□□ -1.73
UBR1-211ENST00000569971 DAPP1Q9UN19 280 aa4.22□□□□□ -1.73
UBR1-211ENST00000569971 HECW2Q9P2P5 1572 aa4.22□□□□□ -1.73
UBR1-211ENST00000569971 KDM5AP29375 1690 aaKnown RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms