RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 SLC25A11Q02978 314 aaKnown RBP6.27□□□□□ -1.41
CYLD-216ENST00000569891 DPYSL2Q16555 572 aa6.27□□□□□ -1.41
CYLD-216ENST00000569891 CTXN3Q4LDR2 81 aa6.27□□□□□ -1.41
CYLD-216ENST00000569891 PPP6R3Q5H9R7 873 aaPredicted RBP6.27□□□□□ -1.41
CYLD-216ENST00000569891 BBS5Q8N3I7 341 aa6.27□□□□□ -1.41
CYLD-216ENST00000569891 KBTBD7Q8WVZ9 684 aa6.27□□□□□ -1.41
CYLD-216ENST00000569891 ZFP42Q96MM3 310 aa6.27□□□□□ -1.41
CYLD-216ENST00000569891 TMEM109Q9BVC6 243 aa6.27□□□□□ -1.41
CYLD-216ENST00000569891 XAB2Q9HCS7 855 aaKnown RBP6.27□□□□□ -1.41
CYLD-216ENST00000569891 BCCIPQ9P287 314 aaKnown RBP eCLIP6.27□□□□□ -1.41
CYLD-216ENST00000569891 ESYT3A0FGR9 886 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 PI4K2BG5E9Z4 385 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 EEF2KO00418 725 aaKnown RBP6.26□□□□□ -1.41
CYLD-216ENST00000569891 PAPSS1O43252 624 aaPredicted RBP6.26□□□□□ -1.41
CYLD-216ENST00000569891 KLF1Q13351 362 aaPredicted RBP6.26□□□□□ -1.41
CYLD-216ENST00000569891 ORC1Q13415 861 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 HIF1AQ16665 826 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 TRIM71Q2Q1W2 868 aaKnown RBP6.26□□□□□ -1.41
CYLD-216ENST00000569891 CNKSR3Q6P9H4 555 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 DEFB106AQ8N104 65 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 ZCCHC9Q8N567 271 aaKnown RBP6.26□□□□□ -1.41
CYLD-216ENST00000569891 EMC1Q8N766 993 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 C12orf29Q8N999 325 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 STKLD1Q8NE28 680 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 JOSD2Q8TAC2 188 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 ACTL9Q8TC94 416 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 MYLPFQ96A32 169 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 FAM84AQ96KN4 292 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 HIPK3Q9H422 1215 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 ZNF446Q9NWS9 450 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 FAM53CQ9NYF3 392 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 NKIRAS1Q9NYS0 192 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 CHORDC1Q9UHD1 332 aaPredicted RBP6.26□□□□□ -1.41
CYLD-216ENST00000569891 ABHD14A-ACY1A0A1B0GW23 586 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 NCAM1P13591 858 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 CTGFP29279 349 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 ELF1P32519 619 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 HSD17B3P37058 310 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 DYNLT1P63172 113 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 ZNF33AQ06730 810 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 NOMO1Q15155 1222 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 ANO4Q32M45 955 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 C2CD6Q53TS8 623 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 TMCO4Q5TGY1 634 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 ARMC3Q5W041 872 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 CCDC117Q8IWD4 279 aaPredicted RBP6.26□□□□□ -1.41
CYLD-216ENST00000569891 SCUBE3Q8IX30 993 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 ATP6V0D2Q8N8Y2 350 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 CDKL2Q92772 493 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 ELMO3Q96BJ8 720 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 AGO3Q9H9G7 860 aaKnown RBP6.26□□□□□ -1.41
CYLD-216ENST00000569891 HMGXB4Q9UGU5 601 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 ADAM28Q9UKQ2 775 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 BCLAF3A2AJT9 711 aaKnown RBP6.26□□□□□ -1.41
CYLD-216ENST00000569891 ERI2A8K979 691 aaKnown RBP6.26□□□□□ -1.41
CYLD-216ENST00000569891 CHADO15335 359 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 CDH16O75309 829 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 ITGA8P53708 1063 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 DAOAP59103 153 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 TRIM32Q13049 653 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 ANKRD20A8PQ5CZ79 823 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 ZNF598Q86UK7 904 aaKnown RBP6.26□□□□□ -1.41
CYLD-216ENST00000569891 MON1AQ86VX9 555 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 RELL1Q8IUW5 271 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 SCN4BQ8IWT1 228 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 FUKQ8N0W3 1084 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 TMEM199Q8N511 208 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 SLC7A14Q8TBB6 771 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 SH3TC2Q8TF17 1288 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 PYROXD1Q8WU10 500 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 HDAC7Q8WUI4 952 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 TFB1MQ8WVM0 346 aaKnown RBP6.26□□□□□ -1.41
CYLD-216ENST00000569891 DYDC1Q8WWB3 177 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 LPPQ93052 612 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 PGAP3Q96FM1 320 aaPredicted RBP6.26□□□□□ -1.41
CYLD-216ENST00000569891 C8orf48Q96LL4 319 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 DEFB118Q96PH6 123 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 WDCPQ9H6R7 721 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 TLR8Q9NR97 1041 aaKnown RBP6.26□□□□□ -1.41
CYLD-216ENST00000569891 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.26□□□□□ -1.41
CYLD-216ENST00000569891 OGDHLQ9ULD0 1010 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 OPHN1O60890 802 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 CCL5P13501 91 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 LAG3P18627 525 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 NR1D1P20393 614 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 CYP2F1P24903 491 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 CCR1P32246 355 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 STX2P32856 288 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 RPL21P46778 160 aaKnown RBP6.26□□□□□ -1.41
CYLD-216ENST00000569891 PPP3CCP48454 512 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 IFRD2Q12894 506 aaPredicted RBP6.26□□□□□ -1.41
CYLD-216ENST00000569891 TAZQ16635 292 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 TIGD5Q53EQ6 642 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 TIGD7Q6NT04 549 aaPredicted RBP6.26□□□□□ -1.41
CYLD-216ENST00000569891 CLEC20AQ6ZU45 233 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 CTU1Q7Z7A3 348 aaKnown RBP6.26□□□□□ -1.41
CYLD-216ENST00000569891 CENPIQ92674 756 aaPredicted RBP6.26□□□□□ -1.41
CYLD-216ENST00000569891 FAF2Q96CS3 445 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 ZIM3Q96PE6 472 aa6.26□□□□□ -1.41
CYLD-216ENST00000569891 ZIC5Q96T25 663 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms