RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 SETSIPP0DME0 302 aa8.21□□□□□ -1.1
CDH3-209ENST00000569080 VDRP11473 427 aa8.21□□□□□ -1.1
CDH3-209ENST00000569080 CD19P15391 556 aa8.21□□□□□ -1.1
CDH3-209ENST00000569080 BRD2P25440 801 aaKnown RBP8.21□□□□□ -1.1
CDH3-209ENST00000569080 GRIA2P42262 883 aa8.21□□□□□ -1.1
CDH3-209ENST00000569080 ID4P47928 161 aa8.21□□□□□ -1.1
CDH3-209ENST00000569080 YWHAGP61981 247 aaKnown RBP eCLIP8.21□□□□□ -1.1
CDH3-209ENST00000569080 YWHAEP62258 255 aaKnown RBP8.21□□□□□ -1.1
CDH3-209ENST00000569080 MRPS21P82921 87 aaKnown RBP8.21□□□□□ -1.1
CDH3-209ENST00000569080 ADIGQ0VDE8 80 aa8.21□□□□□ -1.1
CDH3-209ENST00000569080 CRY1Q16526 586 aa8.21□□□□□ -1.1
CDH3-209ENST00000569080 CAMK4Q16566 473 aa8.21□□□□□ -1.1
CDH3-209ENST00000569080 HSF5Q4G112 596 aaPredicted RBP8.21□□□□□ -1.1
CDH3-209ENST00000569080 C2orf27AQ580R0 203 aa8.21□□□□□ -1.1
CDH3-209ENST00000569080 C10orf120Q5SQS8 335 aa8.21□□□□□ -1.1
CDH3-209ENST00000569080 EMC10Q5UCC4 262 aa8.21□□□□□ -1.1
CDH3-209ENST00000569080 TMEM270Q6UE05 265 aa8.21□□□□□ -1.1
CDH3-209ENST00000569080 TMEM92Q6UXU6 159 aa8.21□□□□□ -1.1
CDH3-209ENST00000569080 CLEC17AQ6ZS10 378 aa8.21□□□□□ -1.1
CDH3-209ENST00000569080 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.21□□□□□ -1.1
CDH3-209ENST00000569080 KBTBD6Q86V97 674 aa8.21□□□□□ -1.1
CDH3-209ENST00000569080 FAM217AQ8IXS0 508 aa8.21□□□□□ -1.1
CDH3-209ENST00000569080 SCML4Q8N228 414 aa8.21□□□□□ -1.1
CDH3-209ENST00000569080 ALLCQ8N6M5 410 aa8.21□□□□□ -1.1
CDH3-209ENST00000569080 NAT16Q8N8M0 369 aa8.21□□□□□ -1.1
CDH3-209ENST00000569080 RBBP8NLQ8NC74 664 aaPredicted RBP8.21□□□□□ -1.1
CDH3-209ENST00000569080 SLC35F5Q8WV83 523 aa8.21□□□□□ -1.1
CDH3-209ENST00000569080 KCTD13Q8WZ19 329 aa8.21□□□□□ -1.1
CDH3-209ENST00000569080 NDRG1Q92597 394 aaKnown RBP8.21□□□□□ -1.1
CDH3-209ENST00000569080 ZC3H10Q96K80 434 aaKnown RBP8.21□□□□□ -1.1
CDH3-209ENST00000569080 CNOT6LQ96LI5 555 aaKnown RBP8.21□□□□□ -1.1
CDH3-209ENST00000569080 CDK5RAP1Q96SZ6 601 aaKnown RBP8.21□□□□□ -1.1
CDH3-209ENST00000569080 SRRTQ9BXP5 876 aaKnown RBP8.21□□□□□ -1.1
CDH3-209ENST00000569080 DNAI2Q9GZS0 605 aa8.21□□□□□ -1.1
CDH3-209ENST00000569080 INTS2Q9H0H0 1204 aaKnown RBP8.21□□□□□ -1.1
CDH3-209ENST00000569080 CLSTN2Q9H4D0 955 aa8.21□□□□□ -1.1
CDH3-209ENST00000569080 ZDHHC4Q9NPG8 344 aa8.21□□□□□ -1.1
CDH3-209ENST00000569080 FBXO10Q9UK96 956 aa8.21□□□□□ -1.1
CDH3-209ENST00000569080 GMEB2Q9UKD1 530 aa8.21□□□□□ -1.1
CDH3-209ENST00000569080 SDK1Q7Z5N4 2213 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 PRRT4C9JH25 899 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 NEDD8-MDP1E9PL57 170 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 EPN2O95208 641 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 KLF8O95600 359 aaPredicted RBP8.2□□□□□ -1.1
CDH3-209ENST00000569080 PENKP01210 267 aaPredicted RBP8.2□□□□□ -1.1
CDH3-209ENST00000569080 APODP05090 189 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 CISD3P0C7P0 127 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 RALAP11233 206 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 TYRP14679 529 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 CORO1AP31146 461 aaKnown RBP8.2□□□□□ -1.1
CDH3-209ENST00000569080 TIE1P35590 1138 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 TNFRSF4P43489 277 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 RPL34P49207 117 aaKnown RBP8.2□□□□□ -1.1
CDH3-209ENST00000569080 DAOAP59103 153 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 APBA1Q02410 837 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 LMNB2Q03252 620 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 GOLGA8FQ08AF8 430 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 GOLGA8DPQ0D2H9 430 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 SPEM2Q0P670 501 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 EFEMP1Q12805 493 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 ANO4Q32M45 955 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 DPCR1Q3MIW9 517 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 PLK5Q496M5 336 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 FYB2Q5VWT5 728 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 ANO7Q6IWH7 933 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 PMF1Q6P1K2 205 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 MSANTD2Q6P1R3 559 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 TRIM65Q6PJ69 517 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 TOGARAM2Q6ZUX3 1019 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 RRAGAQ7L523 313 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 TADA2BQ86TJ2 420 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 ARHGAP18Q8N392 663 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 CCDC33Q8N5R6 958 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 GPR161Q8N6U8 529 aaKnown RBP8.2□□□□□ -1.1
CDH3-209ENST00000569080 TXNDC5Q8NBS9 432 aaKnown RBP8.2□□□□□ -1.1
CDH3-209ENST00000569080 EHBP1Q8NDI1 1231 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 TSTD1Q8NFU3 115 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 CCDC26Q8TAB7 109 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 OLIG1Q8TAK6 271 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 UBA3Q8TBC4 463 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 SECISBP2LQ93073 1101 aaKnown RBP8.2□□□□□ -1.1
CDH3-209ENST00000569080 BBS2Q9BXC9 721 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 DUSP15Q9H1R2 295 aaPredicted RBP8.2□□□□□ -1.1
CDH3-209ENST00000569080 CNGB3Q9NQW8 809 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 SEMA4GQ9NTN9 838 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 DNAJC17Q9NVM6 304 aaKnown RBP8.2□□□□□ -1.1
CDH3-209ENST00000569080 MARCH2Q9P0N8 246 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 DEC1Q9P2X7 70 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 HESX1Q9UBX0 185 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 RASAL2Q9UJF2 1139 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 LSM7Q9UK45 103 aaKnown RBP8.2□□□□□ -1.1
CDH3-209ENST00000569080 AJAP1Q9UKB5 411 aaPredicted RBP8.2□□□□□ -1.1
CDH3-209ENST00000569080 AGO1Q9UL18 857 aaKnown RBP8.2□□□□□ -1.1
CDH3-209ENST00000569080 RAB23Q9ULC3 237 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 KIAA1257Q9ULG3 409 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 STARD13Q9Y3M8 1113 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 PCDHB4Q9Y5E5 795 aa8.2□□□□□ -1.1
CDH3-209ENST00000569080 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.2□□□□□ -1.1
CDH3-209ENST00000569080 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.2□□□□□ -1.1
CDH3-209ENST00000569080 CKAP5Q14008 2032 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms