RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 NT5C3BQ969T7 300 aa18.85■□□□□ 0.61
SMPD3-211ENST00000568373 CHMP6Q96FZ7 201 aa18.85■□□□□ 0.61
SMPD3-211ENST00000568373 CSPG4P5Q96PW8 444 aa18.85■□□□□ 0.61
SMPD3-211ENST00000568373 PAAF1Q9BRP4 392 aa18.85■□□□□ 0.61
SMPD3-211ENST00000568373 CCDC134Q9H6E4 229 aa18.85■□□□□ 0.61
SMPD3-211ENST00000568373 ZMYND8Q9ULU4 1186 aaPredicted RBP18.85■□□□□ 0.61
SMPD3-211ENST00000568373 A0A0U1RQF3 1178 aa18.84■□□□□ 0.61
SMPD3-211ENST00000568373 RBL1P28749 1068 aa18.84■□□□□ 0.61
SMPD3-211ENST00000568373 NOS2P35228 1153 aa18.84■□□□□ 0.61
SMPD3-211ENST00000568373 GPX6P59796 221 aa18.84■□□□□ 0.61
SMPD3-211ENST00000568373 RNASELQ05823 741 aaKnown RBP18.84■□□□□ 0.61
SMPD3-211ENST00000568373 CAPN12Q6ZSI9 719 aa18.84■□□□□ 0.61
SMPD3-211ENST00000568373 TADA2BQ86TJ2 420 aa18.84■□□□□ 0.61
SMPD3-211ENST00000568373 FAM35AQ86V20 835 aa18.84■□□□□ 0.61
SMPD3-211ENST00000568373 FAM131BQ86XD5 332 aa18.84■□□□□ 0.61
SMPD3-211ENST00000568373 ATP11CQ8NB49 1132 aa18.84■□□□□ 0.61
SMPD3-211ENST00000568373 MAML1Q92585 1016 aa18.84■□□□□ 0.61
SMPD3-211ENST00000568373 PCED1BQ96HM7 432 aa18.84■□□□□ 0.61
SMPD3-211ENST00000568373 ZNF317Q96PQ6 595 aaPredicted RBP18.84■□□□□ 0.61
SMPD3-211ENST00000568373 MAGEB5Q9BZ81 275 aa18.84■□□□□ 0.61
SMPD3-211ENST00000568373 PPCSQ9HAB8 311 aa18.84■□□□□ 0.61
SMPD3-211ENST00000568373 RNF186Q9NXI6 227 aa18.84■□□□□ 0.61
SMPD3-211ENST00000568373 CDH9Q9ULB4 789 aa18.84■□□□□ 0.61
SMPD3-211ENST00000568373 ACTL7BQ9Y614 415 aa18.84■□□□□ 0.61
SMPD3-211ENST00000568373 CLUHO75153 1309 aa18.84■□□□□ 0.61
SMPD3-211ENST00000568373 MYBPHLA2RUH7 354 aa18.83■□□□□ 0.61
SMPD3-211ENST00000568373 C5orf60A6NFR6 353 aa18.83■□□□□ 0.61
SMPD3-211ENST00000568373 FOXO6A8MYZ6 492 aa18.83■□□□□ 0.61
SMPD3-211ENST00000568373 MAP3K6O95382 1288 aa18.83■□□□□ 0.61
SMPD3-211ENST00000568373 NR2C2P49116 596 aa18.83■□□□□ 0.61
SMPD3-211ENST00000568373 TKTL1P51854 596 aa18.83■□□□□ 0.61
SMPD3-211ENST00000568373 PTK7Q13308 1070 aa18.83■□□□□ 0.61
SMPD3-211ENST00000568373 KCNJ11Q14654 390 aa18.83■□□□□ 0.61
SMPD3-211ENST00000568373 TMED2Q15363 201 aa18.83■□□□□ 0.61
SMPD3-211ENST00000568373 TIGD5Q53EQ6 642 aa18.83■□□□□ 0.61
SMPD3-211ENST00000568373 OTUD1Q5VV17 481 aaPredicted RBP18.83■□□□□ 0.61
SMPD3-211ENST00000568373 BNIPLQ7Z465 357 aa18.83■□□□□ 0.61
SMPD3-211ENST00000568373 PSTKQ8IV42 348 aaKnown RBP18.83■□□□□ 0.61
SMPD3-211ENST00000568373 RNF169Q8NCN4 708 aa18.83■□□□□ 0.61
SMPD3-211ENST00000568373 CAPNS2Q96L46 248 aa18.83■□□□□ 0.61
SMPD3-211ENST00000568373 SLC2A13Q96QE2 648 aa18.83■□□□□ 0.61
SMPD3-211ENST00000568373 NPY6RQ99463 290 aa18.83■□□□□ 0.61
SMPD3-211ENST00000568373 PRMT1Q99873 361 aaKnown RBP18.83■□□□□ 0.61
SMPD3-211ENST00000568373 WDR83Q9BRX9 315 aaKnown RBP18.83■□□□□ 0.61
SMPD3-211ENST00000568373 FZD10Q9ULW2 581 aa18.83■□□□□ 0.61
SMPD3-211ENST00000568373 BRCA2P51587 3418 aa18.83■□□□□ 0.6
SMPD3-211ENST00000568373 CHADO15335 359 aa18.83■□□□□ 0.6
SMPD3-211ENST00000568373 AP1G2O75843 785 aa18.83■□□□□ 0.6
SMPD3-211ENST00000568373 FBXO21O94952 628 aa18.83■□□□□ 0.6
SMPD3-211ENST00000568373 BRAFP15056 766 aa18.83■□□□□ 0.6
SMPD3-211ENST00000568373 DRD4P21917 467 aa18.83■□□□□ 0.6
SMPD3-211ENST00000568373 PHBP35232 272 aa18.83■□□□□ 0.6
SMPD3-211ENST00000568373 SP3Q02447 781 aa18.83■□□□□ 0.6
SMPD3-211ENST00000568373 GBE1Q04446 702 aa18.83■□□□□ 0.6
SMPD3-211ENST00000568373 XRCC4Q13426 336 aa18.83■□□□□ 0.6
SMPD3-211ENST00000568373 QPCTQ16769 361 aa18.83■□□□□ 0.6
SMPD3-211ENST00000568373 CDKL3Q8IVW4 592 aaPredicted RBP18.83■□□□□ 0.6
SMPD3-211ENST00000568373 TRMT13Q9NUP7 481 aaKnown RBP18.83■□□□□ 0.6
SMPD3-211ENST00000568373 RCOR3Q9P2K3 495 aaPredicted RBP18.83■□□□□ 0.6
SMPD3-211ENST00000568373 STAP1Q9ULZ2 295 aa18.83■□□□□ 0.6
SMPD3-211ENST00000568373 NOD1Q9Y239 953 aa18.83■□□□□ 0.6
SMPD3-211ENST00000568373 FAM169AQ9Y6X4 670 aa18.83■□□□□ 0.6
SMPD3-211ENST00000568373 THSD7BQ9C0I4 1608 aa18.83■□□□□ 0.6
SMPD3-211ENST00000568373 POC1B-GALNT4F8VUJ3 575 aa18.82■□□□□ 0.6
SMPD3-211ENST00000568373 POMCP01189 267 aa18.82■□□□□ 0.6
SMPD3-211ENST00000568373 PCSK1P29120 753 aa18.82■□□□□ 0.6
SMPD3-211ENST00000568373 PITX1P78337 314 aaPredicted RBP18.82■□□□□ 0.6
SMPD3-211ENST00000568373 NR1H3Q13133 447 aa18.82■□□□□ 0.6
SMPD3-211ENST00000568373 NOGQ13253 232 aa18.82■□□□□ 0.6
SMPD3-211ENST00000568373 ITGA7Q13683 1181 aa18.82■□□□□ 0.6
SMPD3-211ENST00000568373 RASA2Q15283 850 aa18.82■□□□□ 0.6
SMPD3-211ENST00000568373 BBS9Q3SYG4 887 aa18.82■□□□□ 0.6
SMPD3-211ENST00000568373 SRRM1Q8IYB3 904 aaKnown RBP18.82■□□□□ 0.6
SMPD3-211ENST00000568373 FBXO36Q8NEA4 188 aa18.82■□□□□ 0.6
SMPD3-211ENST00000568373 SMOQ99835 787 aa18.82■□□□□ 0.6
SMPD3-211ENST00000568373 ADAM2Q99965 735 aa18.82■□□□□ 0.6
SMPD3-211ENST00000568373 POPDC2Q9HBU9 364 aa18.82■□□□□ 0.6
SMPD3-211ENST00000568373 RAB6BQ9NRW1 208 aa18.82■□□□□ 0.6
SMPD3-211ENST00000568373 GGA2Q9UJY4 613 aa18.82■□□□□ 0.6
SMPD3-211ENST00000568373 PTCH2Q9Y6C5 1203 aa18.82■□□□□ 0.6
SMPD3-211ENST00000568373 USP3Q9Y6I4 520 aa18.82■□□□□ 0.6
SMPD3-211ENST00000568373 RASA4BC9J798 803 aa18.81■□□□□ 0.6
SMPD3-211ENST00000568373 RASA4O43374 803 aa18.81■□□□□ 0.6
SMPD3-211ENST00000568373 ODC1P11926 461 aa18.81■□□□□ 0.6
SMPD3-211ENST00000568373 ARL4AP40617 200 aa18.81■□□□□ 0.6
SMPD3-211ENST00000568373 SLC10A2Q12908 348 aaPredicted RBP18.81■□□□□ 0.6
SMPD3-211ENST00000568373 TRIM71Q2Q1W2 868 aaKnown RBP18.81■□□□□ 0.6
SMPD3-211ENST00000568373 SLC45A4Q5BKX6 768 aa18.81■□□□□ 0.6
SMPD3-211ENST00000568373 FAM26DQ5JW98 314 aa18.81■□□□□ 0.6
SMPD3-211ENST00000568373 PPP1R21Q6ZMI0 780 aa18.81■□□□□ 0.6
SMPD3-211ENST00000568373 MICALCLQ6ZW33 695 aa18.81■□□□□ 0.6
SMPD3-211ENST00000568373 CPLX4Q7Z7G2 160 aa18.81■□□□□ 0.6
SMPD3-211ENST00000568373 PYROXD2Q8N2H3 581 aa18.81■□□□□ 0.6
SMPD3-211ENST00000568373 ZMIZ2Q8NF64 920 aa18.81■□□□□ 0.6
SMPD3-211ENST00000568373 PGBD4Q96DM1 585 aa18.81■□□□□ 0.6
SMPD3-211ENST00000568373 ULBP1Q9BZM6 244 aa18.81■□□□□ 0.6
SMPD3-211ENST00000568373 KCNK9Q9NPC2 374 aa18.81■□□□□ 0.6
SMPD3-211ENST00000568373 FETUBQ9UGM5 382 aa18.81■□□□□ 0.6
SMPD3-211ENST00000568373 SLC24A2Q9UI40 661 aa18.81■□□□□ 0.6
SMPD3-211ENST00000568373 TDRD15B5MCY1 1934 aaKnown RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms