RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 CDH9Q9ULB4 789 aa24.2■■□□□ 1.46
LINC00543-201ENST00000567234 CCT8L1PA6NM43 557 aa24.19■■□□□ 1.46
LINC00543-201ENST00000567234 RGS16O15492 202 aaPredicted RBP24.19■■□□□ 1.46
LINC00543-201ENST00000567234 ETS1P14921 441 aa24.19■■□□□ 1.46
LINC00543-201ENST00000567234 PECAM1P16284 738 aaPredicted RBP24.19■■□□□ 1.46
LINC00543-201ENST00000567234 DRD4P21917 467 aa24.19■■□□□ 1.46
LINC00543-201ENST00000567234 IL4RP24394 825 aa24.19■■□□□ 1.46
LINC00543-201ENST00000567234 MAGOHP61326 146 aaKnown RBP24.19■■□□□ 1.46
LINC00543-201ENST00000567234 DPYSL2Q16555 572 aa24.19■■□□□ 1.46
LINC00543-201ENST00000567234 TNFAIP8L3Q5GJ75 292 aa24.19■■□□□ 1.46
LINC00543-201ENST00000567234 CHMP6Q96FZ7 201 aa24.19■■□□□ 1.46
LINC00543-201ENST00000567234 SERPINB12Q96P63 405 aa24.19■■□□□ 1.46
LINC00543-201ENST00000567234 RBM15Q96T37 977 aaKnown RBP eCLIP24.19■■□□□ 1.46
LINC00543-201ENST00000567234 SYT15Q9BQS2 421 aa24.19■■□□□ 1.46
LINC00543-201ENST00000567234 CCDC134Q9H6E4 229 aa24.19■■□□□ 1.46
LINC00543-201ENST00000567234 LRRC4CQ9HCJ2 640 aa24.19■■□□□ 1.46
LINC00543-201ENST00000567234 HAUS2Q9NVX0 235 aa24.19■■□□□ 1.46
LINC00543-201ENST00000567234 NINJ2Q9NZG7 142 aa24.19■■□□□ 1.46
LINC00543-201ENST00000567234 ATP6V1G2O95670 118 aa24.19■■□□□ 1.46
LINC00543-201ENST00000567234 IFNB1P01574 187 aa24.19■■□□□ 1.46
LINC00543-201ENST00000567234 FAM200BP0CF97 657 aa24.19■■□□□ 1.46
LINC00543-201ENST00000567234 RBP3P10745 1247 aa24.19■■□□□ 1.46
LINC00543-201ENST00000567234 HSPA8P11142 646 aaKnown RBP24.19■■□□□ 1.46
LINC00543-201ENST00000567234 ACAT1P24752 427 aaKnown RBP24.19■■□□□ 1.46
LINC00543-201ENST00000567234 HPDP32754 393 aaPredicted RBP24.19■■□□□ 1.46
LINC00543-201ENST00000567234 GRIK3Q13003 919 aa24.19■■□□□ 1.46
LINC00543-201ENST00000567234 MDH1BQ5I0G3 518 aa24.19■■□□□ 1.46
LINC00543-201ENST00000567234 UBAP2Q5T6F2 1119 aaKnown RBP24.19■■□□□ 1.46
LINC00543-201ENST00000567234 SLC9A4Q6AI14 798 aa24.19■■□□□ 1.46
LINC00543-201ENST00000567234 CLEC20AQ6ZU45 233 aa24.19■■□□□ 1.46
LINC00543-201ENST00000567234 ADAM2Q99965 735 aa24.19■■□□□ 1.46
LINC00543-201ENST00000567234 CRTAC1Q9NQ79 661 aa24.19■■□□□ 1.46
LINC00543-201ENST00000567234 TRMT13Q9NUP7 481 aaKnown RBP24.19■■□□□ 1.46
LINC00543-201ENST00000567234 SLC12A4Q9UP95 1085 aa24.19■■□□□ 1.46
LINC00543-201ENST00000567234 FARP1Q9Y4F1 1045 aaPredicted RBP24.19■■□□□ 1.46
LINC00543-201ENST00000567234 INPPL1O15357 1258 aa24.18■■□□□ 1.46
LINC00543-201ENST00000567234 DAB1O75553 588 aa24.18■■□□□ 1.46
LINC00543-201ENST00000567234 ACSL3O95573 720 aa24.18■■□□□ 1.46
LINC00543-201ENST00000567234 ABHD2P08910 425 aa24.18■■□□□ 1.46
LINC00543-201ENST00000567234 PCSK1P29120 753 aa24.18■■□□□ 1.46
LINC00543-201ENST00000567234 GBP2P32456 591 aaPredicted RBP24.18■■□□□ 1.46
LINC00543-201ENST00000567234 ELF3P78545 371 aaPredicted RBP24.18■■□□□ 1.46
LINC00543-201ENST00000567234 MRPS5P82675 430 aaKnown RBP24.18■■□□□ 1.46
LINC00543-201ENST00000567234 ADCY1Q08828 1119 aa24.18■■□□□ 1.46
LINC00543-201ENST00000567234 ADIGQ0VDE8 80 aa24.18■■□□□ 1.46
LINC00543-201ENST00000567234 KYNUQ16719 465 aa24.18■■□□□ 1.46
LINC00543-201ENST00000567234 KIAA0319Q5VV43 1072 aa24.18■■□□□ 1.46
LINC00543-201ENST00000567234 PSTKQ8IV42 348 aaKnown RBP24.18■■□□□ 1.46
LINC00543-201ENST00000567234 C3orf58Q8NDZ4 430 aa24.18■■□□□ 1.46
LINC00543-201ENST00000567234 GLT1D1Q96MS3 346 aa24.18■■□□□ 1.46
LINC00543-201ENST00000567234 UROC1Q96N76 676 aa24.18■■□□□ 1.46
LINC00543-201ENST00000567234 TTC25Q96NG3 672 aa24.18■■□□□ 1.46
LINC00543-201ENST00000567234 MED10Q9BTT4 135 aa24.18■■□□□ 1.46
LINC00543-201ENST00000567234 LRRC4Q9HBW1 653 aa24.18■■□□□ 1.46
LINC00543-201ENST00000567234 CLDN5O00501 218 aa24.17■■□□□ 1.46
LINC00543-201ENST00000567234 APOL1O14791 398 aa24.17■■□□□ 1.46
LINC00543-201ENST00000567234 FBXO21O94952 628 aa24.17■■□□□ 1.46
LINC00543-201ENST00000567234 IGFBP6P24592 240 aaPredicted RBP24.17■■□□□ 1.46
LINC00543-201ENST00000567234 MAGEA4P43358 317 aa24.17■■□□□ 1.46
LINC00543-201ENST00000567234 ROR1Q01973 937 aa24.17■■□□□ 1.46
LINC00543-201ENST00000567234 CCDC142Q17RM4 750 aa24.17■■□□□ 1.46
LINC00543-201ENST00000567234 SLC25A52Q3SY17 297 aa24.17■■□□□ 1.46
LINC00543-201ENST00000567234 ZC3H12AQ5D1E8 599 aaKnown RBP24.17■■□□□ 1.46
LINC00543-201ENST00000567234 CPLX4Q7Z7G2 160 aa24.17■■□□□ 1.46
LINC00543-201ENST00000567234 PPIL6Q8IXY8 311 aa24.17■■□□□ 1.46
LINC00543-201ENST00000567234 PLD5Q8N7P1 536 aa24.17■■□□□ 1.46
LINC00543-201ENST00000567234 TSC2P49815 1807 aa24.17■■□□□ 1.46
LINC00543-201ENST00000567234 TLDC2A0PJX2 215 aa24.17■■□□□ 1.46
LINC00543-201ENST00000567234 CYP11A1P05108 521 aa24.17■■□□□ 1.46
LINC00543-201ENST00000567234 ODC1P11926 461 aa24.17■■□□□ 1.46
LINC00543-201ENST00000567234 PRCCQ92733 491 aaPredicted RBP24.17■■□□□ 1.46
LINC00543-201ENST00000567234 NT5C3BQ969T7 300 aa24.17■■□□□ 1.46
LINC00543-201ENST00000567234 PRDM16Q9HAZ2 1276 aa24.17■■□□□ 1.46
LINC00543-201ENST00000567234 NOD2Q9HC29 1040 aa24.17■■□□□ 1.46
LINC00543-201ENST00000567234 CACNG4Q9UBN1 327 aa24.17■■□□□ 1.46
LINC00543-201ENST00000567234 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP24.16■■□□□ 1.46
LINC00543-201ENST00000567234 CFAP69A5D8W1 941 aa24.16■■□□□ 1.46
LINC00543-201ENST00000567234 CASTOR2A6NHX0 329 aa24.16■■□□□ 1.46
LINC00543-201ENST00000567234 ALADP13716 330 aa24.16■■□□□ 1.46
LINC00543-201ENST00000567234 ZFXP17010 805 aaPredicted RBP24.16■■□□□ 1.46
LINC00543-201ENST00000567234 L1CAMP32004 1257 aa24.16■■□□□ 1.46
LINC00543-201ENST00000567234 NOS2P35228 1153 aa24.16■■□□□ 1.46
LINC00543-201ENST00000567234 RPL22P35268 128 aaKnown RBP24.16■■□□□ 1.46
LINC00543-201ENST00000567234 GDF10P55107 478 aa24.16■■□□□ 1.46
LINC00543-201ENST00000567234 YWHAZP63104 245 aaKnown RBP24.16■■□□□ 1.46
LINC00543-201ENST00000567234 TUSC3Q13454 348 aa24.16■■□□□ 1.46
LINC00543-201ENST00000567234 AUHQ13825 339 aaKnown RBP24.16■■□□□ 1.46
LINC00543-201ENST00000567234 TIGD5Q53EQ6 642 aa24.16■■□□□ 1.46
LINC00543-201ENST00000567234 UNC45BQ8IWX7 931 aa24.16■■□□□ 1.46
LINC00543-201ENST00000567234 PQLC3Q8N755 202 aa24.16■■□□□ 1.46
LINC00543-201ENST00000567234 PCDH19Q8TAB3 1148 aa24.16■■□□□ 1.46
LINC00543-201ENST00000567234 EPS8L3Q8TE67 593 aaKnown RBP24.16■■□□□ 1.46
LINC00543-201ENST00000567234 CCDC77Q9BR77 488 aa24.16■■□□□ 1.46
LINC00543-201ENST00000567234 KRT82Q9NSB4 513 aa24.16■■□□□ 1.46
LINC00543-201ENST00000567234 DSEQ9UL01 958 aa24.16■■□□□ 1.46
LINC00543-201ENST00000567234 ARHGEF37A1IGU5 675 aa24.15■■□□□ 1.46
LINC00543-201ENST00000567234 BEST1O76090 585 aa24.15■■□□□ 1.46
LINC00543-201ENST00000567234 TFE3P19532 575 aaPredicted RBP24.15■■□□□ 1.46
LINC00543-201ENST00000567234 CTCFP49711 727 aaPredicted RBP24.15■■□□□ 1.46
LINC00543-201ENST00000567234 LBX1P52954 281 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms