RNA–Protein interactions for RNA: ENST00000566452.1

BBS2-215, Transcript of Bardet-Biedl syndrome 2, human

TSL 2

Gene BBS2, Length 299 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS2-215	ENST00000566452	KCNN1	Q92952	543 aa		4.12	□□□□□ -1.75
BBS2-215	ENST00000566452	RNF125	Q96EQ8	232 aa		4.12	□□□□□ -1.75
BBS2-215	ENST00000566452	NUDT11	Q96G61	164 aa		4.12	□□□□□ -1.75
BBS2-215	ENST00000566452	BRD8	Q9H0E9	1235 aa		4.12	□□□□□ -1.75
BBS2-215	ENST00000566452	ENKD1	Q9H0I2	346 aa		4.12	□□□□□ -1.75
BBS2-215	ENST00000566452	NELFA	Q9H3P2	528 aa		4.12	□□□□□ -1.75
BBS2-215	ENST00000566452	ABHD16B	Q9H3Z7	469 aa		4.12	□□□□□ -1.75
BBS2-215	ENST00000566452	ZNF552	Q9H707	407 aa	Predicted RBP	4.12	□□□□□ -1.75
BBS2-215	ENST00000566452	ACAD9	Q9H845	621 aa		4.12	□□□□□ -1.75
BBS2-215	ENST00000566452	UNKL	Q9H9P5	680 aa	Known RBP	4.12	□□□□□ -1.75
BBS2-215	ENST00000566452	L2HGDH	Q9H9P8	463 aa		4.12	□□□□□ -1.75
BBS2-215	ENST00000566452	KCNK12	Q9HB15	430 aa		4.12	□□□□□ -1.75
BBS2-215	ENST00000566452	SH3GLB2	Q9NR46	395 aa		4.12	□□□□□ -1.75
BBS2-215	ENST00000566452	SIRT5	Q9NXA8	310 aa		4.12	□□□□□ -1.75
BBS2-215	ENST00000566452	NCDN	Q9UBB6	729 aa		4.12	□□□□□ -1.75
BBS2-215	ENST00000566452	VPS28	Q9UK41	221 aa		4.12	□□□□□ -1.75
BBS2-215	ENST00000566452	HPSE	Q9Y251	543 aa		4.12	□□□□□ -1.75
BBS2-215	ENST00000566452	TBC1D30	Q9Y2I9	924 aa		4.12	□□□□□ -1.75
BBS2-215	ENST00000566452	PCDHA5	Q9Y5H7	936 aa		4.12	□□□□□ -1.75
BBS2-215	ENST00000566452	NINL	Q9Y2I6	1382 aa		4.12	□□□□□ -1.75
BBS2-215	ENST00000566452	ERBIN	Q96RT1	1412 aa		4.12	□□□□□ -1.75
BBS2-215	ENST00000566452	LMTK2	Q8IWU2	1503 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	FAM170A	A1A519	330 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	FAM90A18P	A6NE21	464 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	FAM90A16P	A6NEW6	464 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	FAM90A9P	A6NNJ1	464 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	FAM90A5P	A8MXJ8	464 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452		J3KTA2	159 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	AHCYL1	O43865	530 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	KRT38	O76015	456 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	RASAL1	O95294	804 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	CSF1	P09603	554 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	FAM90A15P	P0C7V4	464 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	FAM90A14P	P0C7W9	464 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	AR	P10275	920 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	INSRR	P14616	1297 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	FDXR	P22570	491 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	IGFBP6	P24592	240 aa	Predicted RBP	4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	LRPAP1	P30533	357 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	GALNS	P34059	522 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	IL13	P35225	146 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	NPTX2	P47972	431 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	PTTG1IP	P53801	180 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	RRAD	P55042	308 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	RAP2B	P61225	183 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	ADAM8	P78325	824 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	ATP2C1	P98194	919 aa	Predicted RBP	4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	PIGF	Q07326	219 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	MRPL49	Q13405	166 aa	Known RBP	4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	CUL4A	Q13619	759 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	PUM1	Q14671	1186 aa	Known RBP eCLIP	4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	USP10	Q14694	798 aa	Known RBP	4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	BAK1	Q16611	211 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	CCDC184	Q52MB2	194 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	MFSD4B	Q5TF39	518 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	MANEAL	Q5VSG8	457 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	DGAT2L7P	Q6IED9	249 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452		Q6ZUG5	572 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	TMTC3	Q6ZXV5	915 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	USP30	Q70CQ3	517 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	CHD1L	Q86WJ1	897 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	FITM2	Q8N6M3	262 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	NKAIN3	Q8N8D7	197 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	SLC17A8	Q8NDX2	589 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	SLC35B2	Q8TB61	432 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	AJUBA	Q96IF1	538 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	KLHL32	Q96NJ5	620 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	NUDT22	Q9BRQ3	303 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	TTPAL	Q9BTX7	342 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	SLC46A2	Q9BY10	475 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	IMPG2	Q9BZV3	1241 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	VPS16	Q9H269	839 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	PRDM13	Q9H4Q3	707 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	GSTO2	Q9H4Y5	243 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	CHODL	Q9H9P2	273 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	IL23A	Q9NPF7	189 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	TMLHE	Q9NVH6	421 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	HAUS2	Q9NVX0	235 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	FBXO34	Q9NWN3	711 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	DNMT3B	Q9UBC3	853 aa	Known RBP	4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	DNAJC16	Q9Y2G8	782 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	CYP46A1	Q9Y6A2	500 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	NPHP3	Q7Z494	1330 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	CASZ1	Q86V15	1759 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	PXDN	Q92626	1479 aa		4.11	□□□□□ -1.75
BBS2-215	ENST00000566452	CEP350	Q5VT06	3117 aa		4.1	□□□□□ -1.75
BBS2-215	ENST00000566452	IQGAP3	Q86VI3	1631 aa		4.1	□□□□□ -1.75
BBS2-215	ENST00000566452	IFT172	Q9UG01	1749 aa		4.1	□□□□□ -1.75
BBS2-215	ENST00000566452	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		4.1	□□□□□ -1.75
BBS2-215	ENST00000566452	PNMA6E	A0A0J9YXQ4	647 aa		4.1	□□□□□ -1.75
BBS2-215	ENST00000566452	CCDC78	A2IDD5	438 aa		4.1	□□□□□ -1.75
BBS2-215	ENST00000566452	VWA3A	A6NCI4	1184 aa		4.1	□□□□□ -1.75
BBS2-215	ENST00000566452	SYNDIG1L	A6NDD5	238 aa		4.1	□□□□□ -1.75
BBS2-215	ENST00000566452	SAC3D1	A6NKF1	404 aa		4.1	□□□□□ -1.75
BBS2-215	ENST00000566452		E9PLN8	166 aa		4.1	□□□□□ -1.75
BBS2-215	ENST00000566452	DOK2	O60496	412 aa		4.1	□□□□□ -1.75
BBS2-215	ENST00000566452	PPP6R2	O75170	966 aa		4.1	□□□□□ -1.75
BBS2-215	ENST00000566452	SGPL1	O95470	568 aa		4.1	□□□□□ -1.75
BBS2-215	ENST00000566452	ACADM	P11310	421 aa		4.1	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms