RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 CREB5Q02930 508 aa19.27■□□□□ 0.68
USB1-213ENST00000566292 GOLGA8FQ08AF8 430 aa19.27■□□□□ 0.68
USB1-213ENST00000566292 GOLGA8DPQ0D2H9 430 aa19.27■□□□□ 0.68
USB1-213ENST00000566292 C10orf76Q5T2E6 689 aa19.27■□□□□ 0.68
USB1-213ENST00000566292 ARHGAP17Q68EM7 881 aa19.27■□□□□ 0.68
USB1-213ENST00000566292 TCEAL6Q6IPX3 200 aa19.27■□□□□ 0.68
USB1-213ENST00000566292 TPGS1Q6ZTW0 290 aa19.27■□□□□ 0.68
USB1-213ENST00000566292 ZNF276Q8N554 614 aa19.27■□□□□ 0.68
USB1-213ENST00000566292 TCEAL3Q969E4 200 aa19.27■□□□□ 0.68
USB1-213ENST00000566292 SMARCE1Q969G3 411 aa19.27■□□□□ 0.68
USB1-213ENST00000566292 TIGD1Q96MW7 591 aa19.27■□□□□ 0.68
USB1-213ENST00000566292 BBS2Q9BXC9 721 aa19.27■□□□□ 0.68
USB1-213ENST00000566292 FAM124BQ9H5Z6 455 aaPredicted RBP19.27■□□□□ 0.68
USB1-213ENST00000566292 DNAJC17Q9NVM6 304 aaKnown RBP19.27■□□□□ 0.68
USB1-213ENST00000566292 MARK1Q9P0L2 795 aa19.27■□□□□ 0.68
USB1-213ENST00000566292 CACNG3O60359 315 aa19.26■□□□□ 0.67
USB1-213ENST00000566292 STC2O76061 302 aa19.26■□□□□ 0.67
USB1-213ENST00000566292 TYRP14679 529 aa19.26■□□□□ 0.67
USB1-213ENST00000566292 LRRC63Q05C16 580 aa19.26■□□□□ 0.67
USB1-213ENST00000566292 PREPLQ4J6C6 727 aaPredicted RBP19.26■□□□□ 0.67
USB1-213ENST00000566292 PPM1JQ5JR12 505 aa19.26■□□□□ 0.67
USB1-213ENST00000566292 RAB41Q5JT25 222 aa19.26■□□□□ 0.67
USB1-213ENST00000566292 GRAMD4Q6IC98 578 aa19.26■□□□□ 0.67
USB1-213ENST00000566292 PIGZQ86VD9 579 aa19.26■□□□□ 0.67
USB1-213ENST00000566292 C11orf74Q86VG3 221 aa19.26■□□□□ 0.67
USB1-213ENST00000566292 MIB1Q86YT6 1006 aa19.26■□□□□ 0.67
USB1-213ENST00000566292 ZNF513Q8N8E2 541 aaPredicted RBP19.26■□□□□ 0.67
USB1-213ENST00000566292 RLN3Q8WXF3 142 aa19.26■□□□□ 0.67
USB1-213ENST00000566292 SLC35C1Q96A29 364 aa19.26■□□□□ 0.67
USB1-213ENST00000566292 P2RY11Q96G91 374 aa19.26■□□□□ 0.67
USB1-213ENST00000566292 UBXN6Q9BZV1 441 aa19.26■□□□□ 0.67
USB1-213ENST00000566292 POLMQ9NP87 494 aaPredicted RBP19.26■□□□□ 0.67
USB1-213ENST00000566292 CLIC5Q9NZA1 410 aa19.26■□□□□ 0.67
USB1-213ENST00000566292 TM4SF5O14894 197 aa19.25■□□□□ 0.67
USB1-213ENST00000566292 CAVIN2O95810 425 aa19.25■□□□□ 0.67
USB1-213ENST00000566292 RALAP11233 206 aa19.25■□□□□ 0.67
USB1-213ENST00000566292 CD44P16070 742 aaKnown RBP19.25■□□□□ 0.67
USB1-213ENST00000566292 P2RY2P41231 377 aa19.25■□□□□ 0.67
USB1-213ENST00000566292 CUL2Q13617 745 aa19.25■□□□□ 0.67
USB1-213ENST00000566292 STPG1Q5TH74 334 aa19.25■□□□□ 0.67
USB1-213ENST00000566292 ISM2Q6H9L7 571 aa19.25■□□□□ 0.67
USB1-213ENST00000566292 TOGARAM2Q6ZUX3 1019 aa19.25■□□□□ 0.67
USB1-213ENST00000566292 FRMD1Q8N878 549 aa19.25■□□□□ 0.67
USB1-213ENST00000566292 ANKRD52Q8NB46 1076 aa19.25■□□□□ 0.67
USB1-213ENST00000566292 KCNV2Q8TDN2 545 aa19.25■□□□□ 0.67
USB1-213ENST00000566292 HMGB4Q8WW32 186 aa19.25■□□□□ 0.67
USB1-213ENST00000566292 WDR35Q9P2L0 1181 aa19.25■□□□□ 0.67
USB1-213ENST00000566292 ARMCX3Q9UH62 379 aaPredicted RBP19.25■□□□□ 0.67
USB1-213ENST00000566292 STARD13Q9Y3M8 1113 aa19.25■□□□□ 0.67
USB1-213ENST00000566292 GON4LQ3T8J9 2241 aa19.25■□□□□ 0.67
USB1-213ENST00000566292 PI4KAP42356 2102 aa19.24■□□□□ 0.67
USB1-213ENST00000566292 TCRBV21S2A2A0A5A6 115 aa19.24■□□□□ 0.67
USB1-213ENST00000566292 TULP2O00295 520 aa19.24■□□□□ 0.67
USB1-213ENST00000566292 KLKB1P03952 638 aa19.24■□□□□ 0.67
USB1-213ENST00000566292 WASP42768 502 aa19.24■□□□□ 0.67
USB1-213ENST00000566292 EGFLAMQ63HQ2 1017 aa19.24■□□□□ 0.67
USB1-213ENST00000566292 IL31Q6EBC2 164 aa19.24■□□□□ 0.67
USB1-213ENST00000566292 TADA2BQ86TJ2 420 aa19.24■□□□□ 0.67
USB1-213ENST00000566292 UBR7Q8N806 425 aa19.24■□□□□ 0.67
USB1-213ENST00000566292 XPO6Q96QU8 1125 aaKnown RBP19.24■□□□□ 0.67
USB1-213ENST00000566292 ACOX2Q99424 681 aa19.24■□□□□ 0.67
USB1-213ENST00000566292 BCCIPQ9P287 314 aaKnown RBP eCLIP19.24■□□□□ 0.67
USB1-213ENST00000566292 MBD1Q9UIS9 605 aaPredicted RBP19.24■□□□□ 0.67
USB1-213ENST00000566292 RASAL2Q9UJF2 1139 aa19.24■□□□□ 0.67
USB1-213ENST00000566292 MAN1B1Q9UKM7 699 aa19.24■□□□□ 0.67
USB1-213ENST00000566292 TPRP12270 2363 aaKnown RBP19.24■□□□□ 0.67
USB1-213ENST00000566292 PRRT4C9JH25 899 aa19.23■□□□□ 0.67
USB1-213ENST00000566292 ADRB1P08588 477 aa19.23■□□□□ 0.67
USB1-213ENST00000566292 CISD3P0C7P0 127 aa19.23■□□□□ 0.67
USB1-213ENST00000566292 EFEMP1Q12805 493 aa19.23■□□□□ 0.67
USB1-213ENST00000566292 LRMPQ12912 555 aa19.23■□□□□ 0.67
USB1-213ENST00000566292 GOLGA7BQ2TAP0 167 aa19.23■□□□□ 0.67
USB1-213ENST00000566292 MAP7D1Q3KQU3 841 aa19.23■□□□□ 0.67
USB1-213ENST00000566292 NUDT18Q6ZVK8 323 aa19.23■□□□□ 0.67
USB1-213ENST00000566292 BHLHA9Q7RTU4 235 aa19.23■□□□□ 0.67
USB1-213ENST00000566292 TRMT11Q7Z4G4 463 aaKnown RBP19.23■□□□□ 0.67
USB1-213ENST00000566292 ELOA2Q8IYF1 753 aaPredicted RBP19.23■□□□□ 0.67
USB1-213ENST00000566292 NDRG1Q92597 394 aaKnown RBP19.23■□□□□ 0.67
USB1-213ENST00000566292 BHMTQ93088 406 aa19.23■□□□□ 0.67
USB1-213ENST00000566292 CDK5RAP1Q96SZ6 601 aaKnown RBP19.23■□□□□ 0.67
USB1-213ENST00000566292 GTPBP4Q9BZE4 634 aaKnown RBP19.23■□□□□ 0.67
USB1-213ENST00000566292 PLK2Q9NYY3 685 aa19.23■□□□□ 0.67
USB1-213ENST00000566292 HOOK1Q9UJC3 728 aaKnown RBP19.23■□□□□ 0.67
USB1-213ENST00000566292 TSPAN16Q9UKR8 245 aa19.23■□□□□ 0.67
USB1-213ENST00000566292 A0A1W2PQF6 199 aa19.22■□□□□ 0.67
USB1-213ENST00000566292 PSMA7O14818 248 aa19.22■□□□□ 0.67
USB1-213ENST00000566292 HMBSP08397 361 aa19.22■□□□□ 0.67
USB1-213ENST00000566292 HOXB2P14652 356 aa19.22■□□□□ 0.67
USB1-213ENST00000566292 GABRG2P18507 467 aa19.22■□□□□ 0.67
USB1-213ENST00000566292 BMP6P22004 513 aa19.22■□□□□ 0.67
USB1-213ENST00000566292 NTSR1P30989 418 aa19.22■□□□□ 0.67
USB1-213ENST00000566292 FMO5P49326 533 aa19.22■□□□□ 0.67
USB1-213ENST00000566292 DHPSP49366 369 aaPredicted RBP19.22■□□□□ 0.67
USB1-213ENST00000566292 TKTL1P51854 596 aa19.22■□□□□ 0.67
USB1-213ENST00000566292 YWHAGP61981 247 aaKnown RBP eCLIP19.22■□□□□ 0.67
USB1-213ENST00000566292 COG7P83436 770 aa19.22■□□□□ 0.67
USB1-213ENST00000566292 PDE4CQ08493 712 aa19.22■□□□□ 0.67
USB1-213ENST00000566292 SGO2Q562F6 1265 aa19.22■□□□□ 0.67
USB1-213ENST00000566292 PM20D1Q6GTS8 502 aa19.22■□□□□ 0.67
USB1-213ENST00000566292 PGBD3Q8N328 593 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms