RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 ETFBKMTQ8IXQ9 262 aa17.56■□□□□ 0.4
USB1-211ENST00000565662 TERB1Q8NA31 727 aa17.56■□□□□ 0.4
USB1-211ENST00000565662 EHBP1Q8NDI1 1231 aa17.56■□□□□ 0.4
USB1-211ENST00000565662 RNF139Q8WU17 664 aa17.56■□□□□ 0.4
USB1-211ENST00000565662 GBP4Q96PP9 640 aa17.56■□□□□ 0.4
USB1-211ENST00000565662 CLSTN2Q9H4D0 955 aa17.56■□□□□ 0.4
USB1-211ENST00000565662 HBS1LQ9Y450 684 aaKnown RBP17.56■□□□□ 0.4
USB1-211ENST00000565662 RHOBTB1O94844 696 aa17.55■□□□□ 0.4
USB1-211ENST00000565662 IRF1P10914 325 aa17.55■□□□□ 0.4
USB1-211ENST00000565662 DPP6P42658 865 aa17.55■□□□□ 0.4
USB1-211ENST00000565662 ACADSBP45954 432 aa17.55■□□□□ 0.4
USB1-211ENST00000565662 ZNF132P52740 706 aa17.55■□□□□ 0.4
USB1-211ENST00000565662 MFAP3P55082 362 aa17.55■□□□□ 0.4
USB1-211ENST00000565662 PDE4CQ08493 712 aa17.55■□□□□ 0.4
USB1-211ENST00000565662 PUM1Q14671 1186 aaKnown RBP eCLIP17.55■□□□□ 0.4
USB1-211ENST00000565662 USP39Q53GS9 565 aaKnown RBP17.55■□□□□ 0.4
USB1-211ENST00000565662 GRAMD4Q6IC98 578 aa17.55■□□□□ 0.4
USB1-211ENST00000565662 TTC30AQ86WT1 665 aa17.55■□□□□ 0.4
USB1-211ENST00000565662 SPACA7Q96KW9 195 aa17.55■□□□□ 0.4
USB1-211ENST00000565662 CNOT6LQ96LI5 555 aaKnown RBP17.55■□□□□ 0.4
USB1-211ENST00000565662 BBS2Q9BXC9 721 aa17.55■□□□□ 0.4
USB1-211ENST00000565662 NUP62CLQ9H1M0 184 aa17.55■□□□□ 0.4
USB1-211ENST00000565662 MARCH2Q9P0N8 246 aa17.55■□□□□ 0.4
USB1-211ENST00000565662 RASAL2Q9UJF2 1139 aa17.55■□□□□ 0.4
USB1-211ENST00000565662 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.55■□□□□ 0.4
USB1-211ENST00000565662 STARD13Q9Y3M8 1113 aa17.55■□□□□ 0.4
USB1-211ENST00000565662 SPAG17Q6Q759 2223 aa17.55■□□□□ 0.4
USB1-211ENST00000565662 TBC1D3BA6NDS4 549 aa17.54■□□□□ 0.4
USB1-211ENST00000565662 K7EQS6 105 aa17.54■□□□□ 0.4
USB1-211ENST00000565662 ERCC5P28715 1186 aaPredicted RBP17.54■□□□□ 0.4
USB1-211ENST00000565662 HARS2P49590 506 aaKnown RBP17.54■□□□□ 0.4
USB1-211ENST00000565662 STX17P56962 302 aa17.54■□□□□ 0.4
USB1-211ENST00000565662 SNX16P57768 344 aa17.54■□□□□ 0.4
USB1-211ENST00000565662 LRMPQ12912 555 aa17.54■□□□□ 0.4
USB1-211ENST00000565662 GAB4Q2WGN9 574 aa17.54■□□□□ 0.4
USB1-211ENST00000565662 HEATR6Q6AI08 1181 aaKnown RBP17.54■□□□□ 0.4
USB1-211ENST00000565662 SDE2Q6IQ49 451 aa17.54■□□□□ 0.4
USB1-211ENST00000565662 GBP6Q6ZN66 633 aa17.54■□□□□ 0.4
USB1-211ENST00000565662 Q6ZNB5 142 aa17.54■□□□□ 0.4
USB1-211ENST00000565662 CPXM2Q8N436 756 aa17.54■□□□□ 0.4
USB1-211ENST00000565662 RBBP8NLQ8NC74 664 aaPredicted RBP17.54■□□□□ 0.4
USB1-211ENST00000565662 LMO3Q8TAP4 145 aa17.54■□□□□ 0.4
USB1-211ENST00000565662 ZC3H10Q96K80 434 aaKnown RBP17.54■□□□□ 0.4
USB1-211ENST00000565662 THAP9Q9H5L6 903 aa17.54■□□□□ 0.4
USB1-211ENST00000565662 NMUR1Q9HB89 426 aa17.54■□□□□ 0.4
USB1-211ENST00000565662 FBRSL1Q9HCM7 1045 aaKnown RBP17.54■□□□□ 0.4
USB1-211ENST00000565662 USP18Q9UMW8 372 aa17.54■□□□□ 0.4
USB1-211ENST00000565662 CNTN6Q9UQ52 1028 aa17.54■□□□□ 0.4
USB1-211ENST00000565662 EP300Q09472 2414 aaPredicted RBP17.53■□□□□ 0.4
USB1-211ENST00000565662 M0QYV0 167 aa17.53■□□□□ 0.4
USB1-211ENST00000565662 TULP3O75386 442 aa17.53■□□□□ 0.4
USB1-211ENST00000565662 STC2O76061 302 aa17.53■□□□□ 0.4
USB1-211ENST00000565662 ADIGQ0VDE8 80 aa17.53■□□□□ 0.4
USB1-211ENST00000565662 CRY1Q16526 586 aa17.53■□□□□ 0.4
USB1-211ENST00000565662 CAMK4Q16566 473 aa17.53■□□□□ 0.4
USB1-211ENST00000565662 PKDCCQ504Y2 493 aa17.53■□□□□ 0.4
USB1-211ENST00000565662 SCD5Q86SK9 330 aa17.53■□□□□ 0.4
USB1-211ENST00000565662 RASSF3Q86WH2 238 aa17.53■□□□□ 0.4
USB1-211ENST00000565662 MIB1Q86YT6 1006 aa17.53■□□□□ 0.4
USB1-211ENST00000565662 KIAA2013Q8IYS2 634 aa17.53■□□□□ 0.4
USB1-211ENST00000565662 STK32AQ8WU08 396 aa17.53■□□□□ 0.4
USB1-211ENST00000565662 UCMAQ8WVF2 138 aa17.53■□□□□ 0.4
USB1-211ENST00000565662 SLC2A11Q9BYW1 496 aa17.53■□□□□ 0.4
USB1-211ENST00000565662 ULBP1Q9BZM6 244 aa17.53■□□□□ 0.4
USB1-211ENST00000565662 INTS2Q9H0H0 1204 aaKnown RBP17.53■□□□□ 0.4
USB1-211ENST00000565662 DNAJC17Q9NVM6 304 aaKnown RBP17.53■□□□□ 0.4
USB1-211ENST00000565662 OSER1Q9NX31 292 aa17.53■□□□□ 0.4
USB1-211ENST00000565662 NEDD8-MDP1E9PL57 170 aa17.52■□□□□ 0.4
USB1-211ENST00000565662 GFRA2O00451 464 aa17.52■□□□□ 0.4
USB1-211ENST00000565662 HRO43593 1189 aa17.52■□□□□ 0.4
USB1-211ENST00000565662 TYRP14679 529 aa17.52■□□□□ 0.4
USB1-211ENST00000565662 EFEMP1Q12805 493 aa17.52■□□□□ 0.4
USB1-211ENST00000565662 MTA1Q13330 715 aa17.52■□□□□ 0.4
USB1-211ENST00000565662 NNTQ13423 1086 aa17.52■□□□□ 0.4
USB1-211ENST00000565662 EIF4HQ15056 248 aaKnown RBP17.52■□□□□ 0.4
USB1-211ENST00000565662 CSRP2Q16527 193 aa17.52■□□□□ 0.4
USB1-211ENST00000565662 EXOC3L4Q17RC7 722 aa17.52■□□□□ 0.4
USB1-211ENST00000565662 C2orf27AQ580R0 203 aa17.52■□□□□ 0.4
USB1-211ENST00000565662 SPDYCQ5MJ68 293 aa17.52■□□□□ 0.4
USB1-211ENST00000565662 NUGGCQ68CJ6 796 aa17.52■□□□□ 0.4
USB1-211ENST00000565662 BEND5Q7L4P6 421 aa17.52■□□□□ 0.4
USB1-211ENST00000565662 UNC45BQ8IWX7 931 aa17.52■□□□□ 0.4
USB1-211ENST00000565662 ZNF513Q8N8E2 541 aaPredicted RBP17.52■□□□□ 0.4
USB1-211ENST00000565662 HHIPQ96QV1 700 aa17.52■□□□□ 0.4
USB1-211ENST00000565662 TMEM51Q9NW97 253 aa17.52■□□□□ 0.4
USB1-211ENST00000565662 APEX2Q9UBZ4 518 aa17.52■□□□□ 0.4
USB1-211ENST00000565662 CDV3Q9UKY7 258 aaKnown RBP17.52■□□□□ 0.4
USB1-211ENST00000565662 SLC27A6Q9Y2P4 619 aa17.52■□□□□ 0.4
USB1-211ENST00000565662 ZNF292O60281 2723 aa17.52■□□□□ 0.39
USB1-211ENST00000565662 TYW5A2RUC4 315 aaKnown RBP17.51■□□□□ 0.39
USB1-211ENST00000565662 GREM1O60565 184 aa17.51■□□□□ 0.39
USB1-211ENST00000565662 EPN2O95208 641 aa17.51■□□□□ 0.39
USB1-211ENST00000565662 TBX18O95935 607 aa17.51■□□□□ 0.39
USB1-211ENST00000565662 CORO1AP31146 461 aaKnown RBP17.51■□□□□ 0.39
USB1-211ENST00000565662 KIR2DL1P43626 348 aaPredicted RBP17.51■□□□□ 0.39
USB1-211ENST00000565662 MTIF2P46199 727 aaKnown RBP17.51■□□□□ 0.39
USB1-211ENST00000565662 DGKGP49619 791 aa17.51■□□□□ 0.39
USB1-211ENST00000565662 DAOAP59103 153 aa17.51■□□□□ 0.39
USB1-211ENST00000565662 KDSRQ06136 332 aa17.51■□□□□ 0.39
USB1-211ENST00000565662 MAN2A1Q16706 1144 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms