RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 USP4Q13107 963 aa16.71■□□□□ 0.27
RAB40C-208ENST00000564703 RUNX3Q13761 415 aa16.71■□□□□ 0.27
RAB40C-208ENST00000564703 ITPRIPL2Q3MIP1 535 aa16.71■□□□□ 0.27
RAB40C-208ENST00000564703 PTPN20Q4JDL3 420 aa16.71■□□□□ 0.27
RAB40C-208ENST00000564703 PPP1R2P3Q6NXS1 205 aa16.71■□□□□ 0.27
RAB40C-208ENST00000564703 HFE2Q6ZVN8 426 aa16.71■□□□□ 0.27
RAB40C-208ENST00000564703 BHLHA9Q7RTU4 235 aa16.71■□□□□ 0.27
RAB40C-208ENST00000564703 VPS36Q86VN1 386 aa16.71■□□□□ 0.27
RAB40C-208ENST00000564703 ATP2A3Q93084 1043 aa16.71■□□□□ 0.27
RAB40C-208ENST00000564703 PBXIP1Q96AQ6 731 aa16.71■□□□□ 0.27
RAB40C-208ENST00000564703 FAM83CQ9BQN1 747 aa16.71■□□□□ 0.27
RAB40C-208ENST00000564703 DCLK3Q9C098 648 aa16.71■□□□□ 0.27
RAB40C-208ENST00000564703 EBF3Q9H4W6 596 aa16.71■□□□□ 0.27
RAB40C-208ENST00000564703 HAUS4Q9H6D7 363 aa16.71■□□□□ 0.27
RAB40C-208ENST00000564703 ZNHIT6Q9NWK9 470 aaKnown RBP16.71■□□□□ 0.27
RAB40C-208ENST00000564703 ASNSD1Q9NWL6 643 aa16.71■□□□□ 0.27
RAB40C-208ENST00000564703 SFMBT1Q9UHJ3 866 aa16.71■□□□□ 0.27
RAB40C-208ENST00000564703 SPTBN5Q9NRC6 3674 aaKnown RBP16.7■□□□□ 0.26
RAB40C-208ENST00000564703 MAN2B1O00754 1011 aa16.7■□□□□ 0.26
RAB40C-208ENST00000564703 HSF2BPO75031 334 aa16.7■□□□□ 0.26
RAB40C-208ENST00000564703 NFATC1O95644 943 aa16.7■□□□□ 0.26
RAB40C-208ENST00000564703 ERBB2P04626 1255 aa16.7■□□□□ 0.26
RAB40C-208ENST00000564703 HMBSP08397 361 aa16.7■□□□□ 0.26
RAB40C-208ENST00000564703 GABRB2P47870 512 aa16.7■□□□□ 0.26
RAB40C-208ENST00000564703 ZXDBP98169 803 aa16.7■□□□□ 0.26
RAB40C-208ENST00000564703 MLF2Q15773 248 aaPredicted RBP16.7■□□□□ 0.26
RAB40C-208ENST00000564703 TDRD12Q587J7 1177 aaKnown RBP16.7■□□□□ 0.26
RAB40C-208ENST00000564703 HTR3DQ70Z44 454 aa16.7■□□□□ 0.26
RAB40C-208ENST00000564703 BEND5Q7L4P6 421 aa16.7■□□□□ 0.26
RAB40C-208ENST00000564703 VSTM4Q8IW00 320 aa16.7■□□□□ 0.26
RAB40C-208ENST00000564703 CPA6Q8N4T0 437 aa16.7■□□□□ 0.26
RAB40C-208ENST00000564703 OR8K1Q8NGG5 319 aa16.7■□□□□ 0.26
RAB40C-208ENST00000564703 SLC30A5Q8TAD4 765 aa16.7■□□□□ 0.26
RAB40C-208ENST00000564703 EXOC4Q96A65 974 aa16.7■□□□□ 0.26
RAB40C-208ENST00000564703 OTUB2Q96DC9 234 aa16.7■□□□□ 0.26
RAB40C-208ENST00000564703 LINC00597Q9H2U6 94 aa16.7■□□□□ 0.26
RAB40C-208ENST00000564703 C8orf33Q9H7E9 229 aaPredicted RBP16.7■□□□□ 0.26
RAB40C-208ENST00000564703 ARHGEF3Q9NR81 526 aa16.7■□□□□ 0.26
RAB40C-208ENST00000564703 HEBP1Q9NRV9 189 aa16.7■□□□□ 0.26
RAB40C-208ENST00000564703 WDR35Q9P2L0 1181 aa16.7■□□□□ 0.26
RAB40C-208ENST00000564703 NAALADL1Q9UQQ1 740 aa16.7■□□□□ 0.26
RAB40C-208ENST00000564703 ZNF510Q9Y2H8 683 aa16.7■□□□□ 0.26
RAB40C-208ENST00000564703 MRPS17Q9Y2R5 130 aaKnown RBP16.7■□□□□ 0.26
RAB40C-208ENST00000564703 WNT6Q9Y6F9 365 aa16.7■□□□□ 0.26
RAB40C-208ENST00000564703 FAM170AA1A519 330 aa16.69■□□□□ 0.26
RAB40C-208ENST00000564703 GYPCP04921 128 aa16.69■□□□□ 0.26
RAB40C-208ENST00000564703 SERPING1P05155 500 aa16.69■□□□□ 0.26
RAB40C-208ENST00000564703 SKILP12757 684 aa16.69■□□□□ 0.26
RAB40C-208ENST00000564703 UNGP13051 313 aaPredicted RBP16.69■□□□□ 0.26
RAB40C-208ENST00000564703 GBP1P32455 592 aa16.69■□□□□ 0.26
RAB40C-208ENST00000564703 PRKCIP41743 596 aa16.69■□□□□ 0.26
RAB40C-208ENST00000564703 HARS2P49590 506 aaKnown RBP16.69■□□□□ 0.26
RAB40C-208ENST00000564703 MLLT6P55198 1093 aaPredicted RBP16.69■□□□□ 0.26
RAB40C-208ENST00000564703 RNASE9P60153 205 aaKnown RBP16.69■□□□□ 0.26
RAB40C-208ENST00000564703 CDK17Q00537 523 aa16.69■□□□□ 0.26
RAB40C-208ENST00000564703 CLEC16AQ2KHT3 1053 aa16.69■□□□□ 0.26
RAB40C-208ENST00000564703 DCAF6Q58WW2 860 aa16.69■□□□□ 0.26
RAB40C-208ENST00000564703 TMEM31Q5JXX7 168 aa16.69■□□□□ 0.26
RAB40C-208ENST00000564703 TRIM68Q6AZZ1 485 aa16.69■□□□□ 0.26
RAB40C-208ENST00000564703 C1orf228Q6PIY5 440 aa16.69■□□□□ 0.26
RAB40C-208ENST00000564703 ZNF852Q6ZMS4 543 aa16.69■□□□□ 0.26
RAB40C-208ENST00000564703 FAM183BPQ6ZVS7 135 aa16.69■□□□□ 0.26
RAB40C-208ENST00000564703 ADGRG2Q8IZP9 1017 aa16.69■□□□□ 0.26
RAB40C-208ENST00000564703 TTC8Q8TAM2 541 aa16.69■□□□□ 0.26
RAB40C-208ENST00000564703 ZFRQ96KR1 1074 aaKnown RBP16.69■□□□□ 0.26
RAB40C-208ENST00000564703 PCDHB18PQ96TA0 734 aa16.69■□□□□ 0.26
RAB40C-208ENST00000564703 NELL2Q99435 816 aa16.69■□□□□ 0.26
RAB40C-208ENST00000564703 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.69■□□□□ 0.26
RAB40C-208ENST00000564703 GTSE1Q9NYZ3 720 aa16.69■□□□□ 0.26
RAB40C-208ENST00000564703 ADAM22Q9P0K1 906 aa16.69■□□□□ 0.26
RAB40C-208ENST00000564703 TJP2Q9UDY2 1190 aa16.69■□□□□ 0.26
RAB40C-208ENST00000564703 HBS1LQ9Y450 684 aaKnown RBP16.69■□□□□ 0.26
RAB40C-208ENST00000564703 GOLGA8SH3BPF8 625 aa16.68■□□□□ 0.26
RAB40C-208ENST00000564703 GPR37L1O60883 481 aa16.68■□□□□ 0.26
RAB40C-208ENST00000564703 GRAP2O75791 330 aa16.68■□□□□ 0.26
RAB40C-208ENST00000564703 STC2O76061 302 aa16.68■□□□□ 0.26
RAB40C-208ENST00000564703 CALB1P05937 261 aa16.68■□□□□ 0.26
RAB40C-208ENST00000564703 MMP8P22894 467 aa16.68■□□□□ 0.26
RAB40C-208ENST00000564703 SCNN1AP37088 669 aa16.68■□□□□ 0.26
RAB40C-208ENST00000564703 TNK2Q07912 1038 aa16.68■□□□□ 0.26
RAB40C-208ENST00000564703 TAF5Q15542 800 aa16.68■□□□□ 0.26
RAB40C-208ENST00000564703 FAM102AQ5T9C2 384 aaPredicted RBP16.68■□□□□ 0.26
RAB40C-208ENST00000564703 ACAD10Q6JQN1 1059 aa16.68■□□□□ 0.26
RAB40C-208ENST00000564703 MSANTD2Q6P1R3 559 aa16.68■□□□□ 0.26
RAB40C-208ENST00000564703 MMS22LQ6ZRQ5 1243 aa16.68■□□□□ 0.26
RAB40C-208ENST00000564703 TPRG1Q6ZUI0 275 aa16.68■□□□□ 0.26
RAB40C-208ENST00000564703 SLC26A9Q7LBE3 791 aa16.68■□□□□ 0.26
RAB40C-208ENST00000564703 TMC6Q7Z403 805 aa16.68■□□□□ 0.26
RAB40C-208ENST00000564703 RALGPS2Q86X27 583 aaPredicted RBP16.68■□□□□ 0.26
RAB40C-208ENST00000564703 UNC45BQ8IWX7 931 aa16.68■□□□□ 0.26
RAB40C-208ENST00000564703 DEFB106AQ8N104 65 aa16.68■□□□□ 0.26
RAB40C-208ENST00000564703 FLCNQ8NFG4 579 aa16.68■□□□□ 0.26
RAB40C-208ENST00000564703 PLD4Q96BZ4 506 aa16.68■□□□□ 0.26
RAB40C-208ENST00000564703 ASIC4Q96FT7 647 aa16.68■□□□□ 0.26
RAB40C-208ENST00000564703 MSANTD3Q96H12 275 aa16.68■□□□□ 0.26
RAB40C-208ENST00000564703 SERPINB11Q96P15 392 aa16.68■□□□□ 0.26
RAB40C-208ENST00000564703 C11orf70Q9BRQ4 267 aa16.68■□□□□ 0.26
RAB40C-208ENST00000564703 ECT2Q9H8V3 914 aa16.68■□□□□ 0.26
RAB40C-208ENST00000564703 PIAS3Q9Y6X2 628 aa16.68■□□□□ 0.26
RAB40C-208ENST00000564703 HELZP42694 1942 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms