RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 MANSC4A6NHS7 340 aaPredicted RBP7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 ZNF487B1APH4 448 aa7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 B2RBV5 119 aa7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 ALOX15BO15296 676 aa7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 ADCY6O43306 1168 aa7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 CST8O60676 142 aa7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 ACSL3O95573 720 aa7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 ZNF865P0CJ78 1059 aaPredicted RBP7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 PDGFRAP16234 1089 aa7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 PMLP29590 882 aa7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 VPS41P49754 854 aa7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 SEC24CP53992 1094 aa7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 IFI35P80217 286 aaPredicted RBP7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 FOXK2Q01167 660 aa7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 OTUD4Q01804 1114 aaKnown RBP7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 TFDP2Q14188 446 aa7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 PDK2Q15119 407 aa7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 RASA2Q15283 850 aa7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 CCDC142Q17RM4 750 aa7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 FAM47CQ5HY64 1035 aa7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 OR6B2Q6IFH4 312 aa7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 LHFPL2Q6ZUX7 228 aa7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 STRA8Q7Z7C7 330 aa7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 TLK2Q86UE8 772 aa7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 EXOC3L1Q86VI1 746 aa7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 TDRPQ86YL5 185 aa7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 CRYBG2Q8N1P7 616 aa7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 EMC1Q8N766 993 aa7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 SLC35F5Q8WV83 523 aa7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 TEKT4Q8WW24 435 aa7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 ZMAT2Q96NC0 199 aaKnown RBP7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 TMEM74Q96NL1 305 aa7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 TBCBQ99426 244 aa7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 DDX23Q9BUQ8 820 aaKnown RBP7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 RSRP1Q9BUV0 290 aa7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 MAK16Q9BXY0 300 aaKnown RBP7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 CDH19Q9H159 772 aa7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 CAAP1Q9H8G2 361 aa7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 ZWILCHQ9H900 591 aa7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 LRRC4CQ9HCJ2 640 aa7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 INTS9Q9NV88 658 aaKnown RBP7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 KLHL11Q9NVR0 708 aa7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 GDAP2Q9NXN4 497 aa7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 MCM8Q9UJA3 840 aa7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 SNX9Q9Y5X1 595 aa7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 FAM169AQ9Y6X4 670 aa7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 DOCK3Q8IZD9 2030 aa7.57□□□□□ -1.2
HERPUD1-209ENST00000564678 SCN1AP35498 2009 aa7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 A0A087WUV0 522 aaPredicted RBP7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 E5RJQ4 531 aa7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 SGK1O00141 431 aa7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 PIRO00625 290 aa7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 FBXO24O75426 580 aa7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 MYCP01106 439 aaPredicted RBP7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 PFKMP08237 780 aa7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 KCNE1P15382 129 aa7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 CHN1P15882 459 aa7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 RPL34P49207 117 aaKnown RBP7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 PSEN2P49810 448 aa7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 CRYBB1P53674 252 aaPredicted RBP7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 INHBEP58166 350 aa7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 SLC6A3Q01959 620 aa7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 GPS1Q13098 491 aa7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 PPP1R26Q5T8A7 1209 aaPredicted RBP7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 RNASEH2BQ5TBB1 312 aaKnown RBP7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 C9orf57Q5W0N0 161 aa7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 RINLQ6ZS11 566 aa7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 CENPUQ71F23 418 aa7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 SESTD1Q86VW0 696 aa7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 UBA3Q8TBC4 463 aa7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 ACTL9Q8TC94 416 aa7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 RXFP2Q8WXD0 754 aa7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 RSAD2Q8WXG1 361 aa7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 FOXJ1Q92949 421 aa7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 ARHGEF2Q92974 986 aaKnown RBP7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 CHMP6Q96FZ7 201 aa7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 ZNF560Q96MR9 790 aa7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 OSMRQ99650 979 aa7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 FAM118BQ9BPY3 351 aa7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 FAM49AQ9H0Q0 323 aaPredicted RBP7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 AP5M1Q9H0R1 490 aa7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 UNC93B1Q9H1C4 597 aa7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 FETUBQ9UGM5 382 aa7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 MCF2LO15068 1137 aa7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 PRPSAP2O60256 369 aa7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 KPNA6O60684 536 aa7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 TNFRSF21O75509 655 aa7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 RECQL4O94761 1208 aa7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 KIAA0754O94854 1291 aa7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 HOXC8P31273 242 aa7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 MAGEA9P43362 315 aa7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 ACADSBP45954 432 aa7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 SLCO1A2P46721 670 aa7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 SNX17Q15036 470 aa7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 LONRF1Q17RB8 773 aa7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 SMTNL2Q2TAL5 461 aa7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 KCNT1Q5JUK3 1230 aa7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 FBXO47Q5MNV8 452 aa7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 GPR153Q6NV75 609 aa7.56□□□□□ -1.2
HERPUD1-209ENST00000564678 C6orf89Q6UWU4 347 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms