RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 ANXA13P27216 316 aa10.98□□□□□ -0.65
SF3B3-204ENST00000563739 YWHAQP27348 245 aa10.98□□□□□ -0.65
SF3B3-204ENST00000563739 RDXP35241 583 aaKnown RBP10.98□□□□□ -0.65
SF3B3-204ENST00000563739 LONP1P36776 959 aaKnown RBP10.98□□□□□ -0.65
SF3B3-204ENST00000563739 TPMTP51580 245 aa10.98□□□□□ -0.65
SF3B3-204ENST00000563739 MAPRE1Q15691 268 aaKnown RBP10.98□□□□□ -0.65
SF3B3-204ENST00000563739 GEN1Q17RS7 908 aa10.98□□□□□ -0.65
SF3B3-204ENST00000563739 ANO4Q32M45 955 aa10.98□□□□□ -0.65
SF3B3-204ENST00000563739 HECTD3Q5T447 861 aa10.98□□□□□ -0.65
SF3B3-204ENST00000563739 TDRD10Q5VZ19 366 aaKnown RBP10.98□□□□□ -0.65
SF3B3-204ENST00000563739 TMEM215Q68D42 235 aa10.98□□□□□ -0.65
SF3B3-204ENST00000563739 TRAPPC11Q7Z392 1133 aa10.98□□□□□ -0.65
SF3B3-204ENST00000563739 FUKQ8N0W3 1084 aa10.98□□□□□ -0.65
SF3B3-204ENST00000563739 NUP93Q8N1F7 819 aa10.98□□□□□ -0.65
SF3B3-204ENST00000563739 GPD1LQ8N335 351 aa10.98□□□□□ -0.65
SF3B3-204ENST00000563739 ZNF843Q8N446 348 aa10.98□□□□□ -0.65
SF3B3-204ENST00000563739 B3GALNT2Q8NCR0 500 aa10.98□□□□□ -0.65
SF3B3-204ENST00000563739 PIP4K2CQ8TBX8 421 aa10.98□□□□□ -0.65
SF3B3-204ENST00000563739 CACTINQ8WUQ7 758 aaKnown RBP10.98□□□□□ -0.65
SF3B3-204ENST00000563739 HPS3Q969F9 1004 aa10.98□□□□□ -0.65
SF3B3-204ENST00000563739 ZSCAN31Q96LW9 406 aaPredicted RBP10.98□□□□□ -0.65
SF3B3-204ENST00000563739 SLITRK1Q96PX8 696 aa10.98□□□□□ -0.65
SF3B3-204ENST00000563739 SMYD3Q9H7B4 428 aa10.98□□□□□ -0.65
SF3B3-204ENST00000563739 MRPL44Q9H9J2 332 aaKnown RBP10.98□□□□□ -0.65
SF3B3-204ENST00000563739 PRDM16Q9HAZ2 1276 aa10.98□□□□□ -0.65
SF3B3-204ENST00000563739 NMUR1Q9HB89 426 aa10.98□□□□□ -0.65
SF3B3-204ENST00000563739 ITM2CQ9NQX7 267 aa10.98□□□□□ -0.65
SF3B3-204ENST00000563739 SEL1LQ9UBV2 794 aa10.98□□□□□ -0.65
SF3B3-204ENST00000563739 HMGXB4Q9UGU5 601 aa10.98□□□□□ -0.65
SF3B3-204ENST00000563739 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.98□□□□□ -0.65
SF3B3-204ENST00000563739 PCDHB9Q9Y5E1 797 aa10.98□□□□□ -0.65
SF3B3-204ENST00000563739 STON1Q9Y6Q2 735 aa10.98□□□□□ -0.65
SF3B3-204ENST00000563739 HHLA1C9JL84 531 aa10.97□□□□□ -0.65
SF3B3-204ENST00000563739 CBX4O00257 560 aa10.97□□□□□ -0.65
SF3B3-204ENST00000563739 GFRA2O00451 464 aa10.97□□□□□ -0.65
SF3B3-204ENST00000563739 FLRT2O43155 660 aa10.97□□□□□ -0.65
SF3B3-204ENST00000563739 GCNT3O95395 438 aa10.97□□□□□ -0.65
SF3B3-204ENST00000563739 PENKP01210 267 aaPredicted RBP10.97□□□□□ -0.65
SF3B3-204ENST00000563739 KLKB1P03952 638 aa10.97□□□□□ -0.65
SF3B3-204ENST00000563739 PRKCHP24723 683 aa10.97□□□□□ -0.65
SF3B3-204ENST00000563739 MATKP42679 507 aa10.97□□□□□ -0.65
SF3B3-204ENST00000563739 KIF19Q2TAC6 998 aa10.97□□□□□ -0.65
SF3B3-204ENST00000563739 C8orf34Q49A92 452 aa10.97□□□□□ -0.65
SF3B3-204ENST00000563739 WDR45BQ5MNZ6 344 aa10.97□□□□□ -0.65
SF3B3-204ENST00000563739 FYB2Q5VWT5 728 aa10.97□□□□□ -0.65
SF3B3-204ENST00000563739 MCTP1Q6DN14 999 aa10.97□□□□□ -0.65
SF3B3-204ENST00000563739 HS2ST1Q7LGA3 356 aa10.97□□□□□ -0.65
SF3B3-204ENST00000563739 WDR49Q8IV35 697 aa10.97□□□□□ -0.65
SF3B3-204ENST00000563739 PDZD8Q8NEN9 1154 aa10.97□□□□□ -0.65
SF3B3-204ENST00000563739 CADM4Q8NFZ8 388 aa10.97□□□□□ -0.65
SF3B3-204ENST00000563739 SETD7Q8WTS6 366 aaKnown RBP10.97□□□□□ -0.65
SF3B3-204ENST00000563739 SLC39A7Q92504 469 aa10.97□□□□□ -0.65
SF3B3-204ENST00000563739 FOXJ1Q92949 421 aa10.97□□□□□ -0.65
SF3B3-204ENST00000563739 ANKRD36BP1Q96IX9 119 aa10.97□□□□□ -0.65
SF3B3-204ENST00000563739 BBS2Q9BXC9 721 aa10.97□□□□□ -0.65
SF3B3-204ENST00000563739 PLK2Q9NYY3 685 aa10.97□□□□□ -0.65
SF3B3-204ENST00000563739 THAP10Q9P2Z0 257 aaPredicted RBP10.97□□□□□ -0.65
SF3B3-204ENST00000563739 EIF2B4Q9UI10 523 aaKnown RBP10.97□□□□□ -0.65
SF3B3-204ENST00000563739 FBXO2Q9UK22 296 aaPredicted RBP10.97□□□□□ -0.65
SF3B3-204ENST00000563739 SH3BP1Q9Y3L3 701 aa10.97□□□□□ -0.65
SF3B3-204ENST00000563739 SNX11Q9Y5W9 270 aa10.97□□□□□ -0.65
SF3B3-204ENST00000563739 MEI4A8MW99 385 aa10.96□□□□□ -0.65
SF3B3-204ENST00000563739 H0Y8X5 98 aa10.96□□□□□ -0.65
SF3B3-204ENST00000563739 PLK4O00444 970 aa10.96□□□□□ -0.65
SF3B3-204ENST00000563739 KCNK3O14649 394 aa10.96□□□□□ -0.65
SF3B3-204ENST00000563739 BCAT2O15382 392 aaPredicted RBP10.96□□□□□ -0.65
SF3B3-204ENST00000563739 TGFB1I1O43294 461 aa10.96□□□□□ -0.65
SF3B3-204ENST00000563739 TLR5O60602 858 aa10.96□□□□□ -0.65
SF3B3-204ENST00000563739 EIF5BO60841 1220 aaKnown RBP10.96□□□□□ -0.65
SF3B3-204ENST00000563739 RTN3O95197 1032 aaPredicted RBP10.96□□□□□ -0.65
SF3B3-204ENST00000563739 STAU1O95793 577 aaKnown RBP10.96□□□□□ -0.65
SF3B3-204ENST00000563739 LDHAP00338 332 aaKnown RBP10.96□□□□□ -0.65
SF3B3-204ENST00000563739 GAP43P17677 238 aa10.96□□□□□ -0.65
SF3B3-204ENST00000563739 GNL1P36915 607 aaPredicted RBP10.96□□□□□ -0.65
SF3B3-204ENST00000563739 ABCG1P45844 678 aa10.96□□□□□ -0.65
SF3B3-204ENST00000563739 DGKGP49619 791 aa10.96□□□□□ -0.65
SF3B3-204ENST00000563739 CSNK1EP49674 416 aaKnown RBP10.96□□□□□ -0.65
SF3B3-204ENST00000563739 MFAP3P55082 362 aa10.96□□□□□ -0.65
SF3B3-204ENST00000563739 CDH8P55286 799 aa10.96□□□□□ -0.65
SF3B3-204ENST00000563739 MYL6P60660 151 aa10.96□□□□□ -0.65
SF3B3-204ENST00000563739 SF3A1Q15459 793 aaKnown RBP10.96□□□□□ -0.65
SF3B3-204ENST00000563739 SHBQ15464 509 aa10.96□□□□□ -0.65
SF3B3-204ENST00000563739 BTBD8Q5XKL5 378 aa10.96□□□□□ -0.65
SF3B3-204ENST00000563739 DHRS13Q6UX07 377 aa10.96□□□□□ -0.65
SF3B3-204ENST00000563739 TPGS1Q6ZTW0 290 aa10.96□□□□□ -0.65
SF3B3-204ENST00000563739 EPM2AIP1Q7L775 607 aaPredicted RBP10.96□□□□□ -0.65
SF3B3-204ENST00000563739 CACUL1Q86Y37 369 aa10.96□□□□□ -0.65
SF3B3-204ENST00000563739 KRI1Q8N9T8 703 aaKnown RBP10.96□□□□□ -0.65
SF3B3-204ENST00000563739 PIWIL1Q96J94 861 aaKnown RBP10.96□□□□□ -0.65
SF3B3-204ENST00000563739 CLIC6Q96NY7 704 aa10.96□□□□□ -0.65
SF3B3-204ENST00000563739 CGRRF1Q99675 332 aa10.96□□□□□ -0.65
SF3B3-204ENST00000563739 C6orf106Q9H6K1 298 aaPredicted RBP10.96□□□□□ -0.65
SF3B3-204ENST00000563739 CSNK1G1Q9HCP0 422 aa10.96□□□□□ -0.65
SF3B3-204ENST00000563739 CYLDQ9NQC7 956 aa10.96□□□□□ -0.65
SF3B3-204ENST00000563739 HSPBP1Q9NZL4 362 aa10.96□□□□□ -0.65
SF3B3-204ENST00000563739 STK17AQ9UEE5 414 aa10.96□□□□□ -0.65
SF3B3-204ENST00000563739 SLC27A6Q9Y2P4 619 aa10.96□□□□□ -0.65
SF3B3-204ENST00000563739 GOLGA8CPA6NN73 597 aa10.95□□□□□ -0.66
SF3B3-204ENST00000563739 CYP26A1O43174 497 aa10.95□□□□□ -0.66
SF3B3-204ENST00000563739 PAPSS1O43252 624 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms