RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 OR52E8Q6IFG1 317 aa12.24□□□□□ -0.45
ABCA3-203ENST00000563623 GALNT15Q8N3T1 639 aa12.24□□□□□ -0.45
ABCA3-203ENST00000563623 SHKBP1Q8TBC3 707 aa12.24□□□□□ -0.45
ABCA3-203ENST00000563623 TRAPPC12Q8WVT3 735 aa12.24□□□□□ -0.45
ABCA3-203ENST00000563623 ATP2A3Q93084 1043 aa12.24□□□□□ -0.45
ABCA3-203ENST00000563623 CENPKQ9BS16 269 aa12.24□□□□□ -0.45
ABCA3-203ENST00000563623 CEP41Q9BYV8 373 aa12.24□□□□□ -0.45
ABCA3-203ENST00000563623 WDR35Q9P2L0 1181 aa12.24□□□□□ -0.45
ABCA3-203ENST00000563623 GJA3Q9Y6H8 435 aa12.24□□□□□ -0.45
ABCA3-203ENST00000563623 TEX264Q9Y6I9 313 aa12.24□□□□□ -0.45
ABCA3-203ENST00000563623 C3orf70A6NLC5 250 aaPredicted RBP12.24□□□□□ -0.45
ABCA3-203ENST00000563623 CFLARO15519 480 aa12.24□□□□□ -0.45
ABCA3-203ENST00000563623 TM7SF2O76062 418 aa12.24□□□□□ -0.45
ABCA3-203ENST00000563623 PTPN11Q06124 597 aaPredicted RBP12.24□□□□□ -0.45
ABCA3-203ENST00000563623 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.24□□□□□ -0.45
ABCA3-203ENST00000563623 XYLT1Q86Y38 959 aa12.24□□□□□ -0.45
ABCA3-203ENST00000563623 C7orf31Q8N865 590 aa12.24□□□□□ -0.45
ABCA3-203ENST00000563623 FAM81AQ8TBF8 368 aa12.24□□□□□ -0.45
ABCA3-203ENST00000563623 FAM136AQ96C01 138 aa12.24□□□□□ -0.45
ABCA3-203ENST00000563623 CLMNQ96JQ2 1002 aa12.24□□□□□ -0.45
ABCA3-203ENST00000563623 ACAD9Q9H845 621 aa12.24□□□□□ -0.45
ABCA3-203ENST00000563623 GINS2Q9Y248 185 aa12.24□□□□□ -0.45
ABCA3-203ENST00000563623 DNAJC6O75061 913 aa12.23□□□□□ -0.45
ABCA3-203ENST00000563623 APOEP02649 317 aa12.23□□□□□ -0.45
ABCA3-203ENST00000563623 CLDN10P78369 228 aa12.23□□□□□ -0.45
ABCA3-203ENST00000563623 SLC18A2Q05940 514 aa12.23□□□□□ -0.45
ABCA3-203ENST00000563623 FSTL1Q12841 308 aa12.23□□□□□ -0.45
ABCA3-203ENST00000563623 MMEL1Q495T6 779 aa12.23□□□□□ -0.45
ABCA3-203ENST00000563623 CES3Q6UWW8 571 aa12.23□□□□□ -0.45
ABCA3-203ENST00000563623 NET1Q7Z628 596 aaPredicted RBP12.23□□□□□ -0.45
ABCA3-203ENST00000563623 MMADHCQ9H3L0 296 aaPredicted RBP12.23□□□□□ -0.45
ABCA3-203ENST00000563623 EBF3Q9H4W6 596 aa12.23□□□□□ -0.45
ABCA3-203ENST00000563623 PDLIM7Q9NR12 457 aa12.23□□□□□ -0.45
ABCA3-203ENST00000563623 IL1RAPL1Q9NZN1 696 aa12.23□□□□□ -0.45
ABCA3-203ENST00000563623 SOX13Q9UN79 622 aa12.23□□□□□ -0.45
ABCA3-203ENST00000563623 MYO18AQ92614 2054 aaKnown RBP12.23□□□□□ -0.45
ABCA3-203ENST00000563623 A0A1B0GVG6 124 aa12.23□□□□□ -0.45
ABCA3-203ENST00000563623 E7ESA3 106 aa12.23□□□□□ -0.45
ABCA3-203ENST00000563623 B4GALT5O43286 388 aa12.23□□□□□ -0.45
ABCA3-203ENST00000563623 CREB3O43889 395 aa12.23□□□□□ -0.45
ABCA3-203ENST00000563623 COQ9O75208 318 aa12.23□□□□□ -0.45
ABCA3-203ENST00000563623 GRIA1P42261 906 aa12.23□□□□□ -0.45
ABCA3-203ENST00000563623 ZNF132P52740 706 aa12.23□□□□□ -0.45
ABCA3-203ENST00000563623 AP3M2P53677 418 aa12.23□□□□□ -0.45
ABCA3-203ENST00000563623 NOMO1Q15155 1222 aa12.23□□□□□ -0.45
ABCA3-203ENST00000563623 EFHC1Q5JVL4 640 aa12.23□□□□□ -0.45
ABCA3-203ENST00000563623 C1QTNF12Q5T7M4 302 aa12.23□□□□□ -0.45
ABCA3-203ENST00000563623 N4BP2L1Q5TBK1 243 aaPredicted RBP12.23□□□□□ -0.45
ABCA3-203ENST00000563623 VWA5B1Q5TIE3 1220 aa12.23□□□□□ -0.45
ABCA3-203ENST00000563623 UNC5AQ6ZN44 842 aa12.23□□□□□ -0.45
ABCA3-203ENST00000563623 RAPH1Q70E73 1250 aa12.23□□□□□ -0.45
ABCA3-203ENST00000563623 MPP5Q8N3R9 675 aa12.23□□□□□ -0.45
ABCA3-203ENST00000563623 TWNKQ96RR1 684 aa12.23□□□□□ -0.45
ABCA3-203ENST00000563623 WRNIP1Q96S55 665 aa12.23□□□□□ -0.45
ABCA3-203ENST00000563623 PEBP4Q96S96 227 aa12.23□□□□□ -0.45
ABCA3-203ENST00000563623 DHRS4Q9BTZ2 278 aa12.23□□□□□ -0.45
ABCA3-203ENST00000563623 DEFB129Q9H1M3 183 aa12.23□□□□□ -0.45
ABCA3-203ENST00000563623 FAM49BQ9NUQ9 324 aa12.23□□□□□ -0.45
ABCA3-203ENST00000563623 ETNK2Q9NVF9 386 aa12.23□□□□□ -0.45
ABCA3-203ENST00000563623 MAP3K20Q9NYL2 800 aaKnown RBP12.23□□□□□ -0.45
ABCA3-203ENST00000563623 HBS1LQ9Y450 684 aaKnown RBP12.23□□□□□ -0.45
ABCA3-203ENST00000563623 NFASCO94856 1347 aa12.23□□□□□ -0.45
ABCA3-203ENST00000563623 SMAPO00193 183 aa12.23□□□□□ -0.45
ABCA3-203ENST00000563623 GMPRP36959 345 aa12.23□□□□□ -0.45
ABCA3-203ENST00000563623 CDC16Q13042 620 aa12.23□□□□□ -0.45
ABCA3-203ENST00000563623 EEF1DP3Q658K8 133 aa12.23□□□□□ -0.45
ABCA3-203ENST00000563623 DEFB107AQ8IZN7 70 aa12.23□□□□□ -0.45
ABCA3-203ENST00000563623 FRMD8P1Q9BZ68 369 aaPredicted RBP12.23□□□□□ -0.45
ABCA3-203ENST00000563623 DHX33Q9H6R0 707 aaKnown RBP12.23□□□□□ -0.45
ABCA3-203ENST00000563623 SMYD2Q9NRG4 433 aa12.23□□□□□ -0.45
ABCA3-203ENST00000563623 FETUBQ9UGM5 382 aa12.23□□□□□ -0.45
ABCA3-203ENST00000563623 TTLL3Q9Y4R7 772 aa12.23□□□□□ -0.45
ABCA3-203ENST00000563623 SORBS2O94875 1100 aaKnown RBP12.22□□□□□ -0.45
ABCA3-203ENST00000563623 COPAP53621 1224 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 SPDYAQ5MJ70 313 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 NBPF12Q5TAG4 269 aaPredicted RBP12.22□□□□□ -0.45
ABCA3-203ENST00000563623 FAM160B1Q5W0V3 765 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 XRRA1Q6P2D8 792 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 CCNYQ8ND76 341 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 NMD3Q96D46 503 aaKnown RBP12.22□□□□□ -0.45
ABCA3-203ENST00000563623 VCX3BQ9H321 246 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 VCX3AQ9NNX9 186 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 ACSS2Q9NR19 701 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 PNPOQ9NVS9 261 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 EP400Q96L91 3159 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 A6NJR5 290 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 NEMP1O14524 444 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 ITM2AO43736 263 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 TBC1D12O60347 775 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 MAGEC1O60732 1142 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 ATP6V1G1O75348 118 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 BPGMP07738 259 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 F7P08709 466 aaPredicted RBP12.22□□□□□ -0.45
ABCA3-203ENST00000563623 DHRS4L1P0CG22 281 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 SDC4P31431 198 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 ARL2P36404 184 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 ABCG1P45844 678 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 FAM47CQ5HY64 1035 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 ATF7IP2Q5U623 682 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 ANGEL2Q5VTE6 544 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms