RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 PPP1R26Q5T8A7 1209 aaPredicted RBP22.08■■□□□ 1.13
CHD9-208ENST00000563410 EGFLAMQ63HQ2 1017 aa22.08■■□□□ 1.13
CHD9-208ENST00000563410 GRAMD4Q6IC98 578 aa22.08■■□□□ 1.13
CHD9-208ENST00000563410 Q6ZNB5 142 aa22.08■■□□□ 1.13
CHD9-208ENST00000563410 TPGS1Q6ZTW0 290 aa22.08■■□□□ 1.13
CHD9-208ENST00000563410 NUDT18Q6ZVK8 323 aa22.08■■□□□ 1.13
CHD9-208ENST00000563410 ARMCX6Q7L4S7 300 aa22.08■■□□□ 1.13
CHD9-208ENST00000563410 SCD5Q86SK9 330 aa22.08■■□□□ 1.13
CHD9-208ENST00000563410 PGBD3Q8N328 593 aa22.08■■□□□ 1.13
CHD9-208ENST00000563410 P2RY11Q96G91 374 aa22.08■■□□□ 1.13
CHD9-208ENST00000563410 BBS2Q9BXC9 721 aa22.08■■□□□ 1.13
CHD9-208ENST00000563410 CD248Q9HCU0 757 aa22.08■■□□□ 1.13
CHD9-208ENST00000563410 TMEM9BQ9NQ34 198 aa22.08■■□□□ 1.13
CHD9-208ENST00000563410 TMEM74BQ9NUR3 256 aa22.08■■□□□ 1.13
CHD9-208ENST00000563410 DNAJC17Q9NVM6 304 aaKnown RBP22.08■■□□□ 1.13
CHD9-208ENST00000563410 EVLQ9UI08 416 aaPredicted RBP22.08■■□□□ 1.13
CHD9-208ENST00000563410 FRYQ5TBA9 3013 aa22.08■■□□□ 1.12
CHD9-208ENST00000563410 A0A1W2PQ27 194 aa22.07■■□□□ 1.12
CHD9-208ENST00000563410 A0A1W2PQ64 194 aa22.07■■□□□ 1.12
CHD9-208ENST00000563410 A0A1W2PQD8 194 aa22.07■■□□□ 1.12
CHD9-208ENST00000563410 A0A1W2PQF6 199 aa22.07■■□□□ 1.12
CHD9-208ENST00000563410 GIPC1O14908 333 aa22.07■■□□□ 1.12
CHD9-208ENST00000563410 MAP3K13O43283 966 aa22.07■■□□□ 1.12
CHD9-208ENST00000563410 HOXB2P14652 356 aa22.07■■□□□ 1.12
CHD9-208ENST00000563410 RPL13P26373 211 aaKnown RBP22.07■■□□□ 1.12
CHD9-208ENST00000563410 NTSR1P30989 418 aa22.07■■□□□ 1.12
CHD9-208ENST00000563410 WASP42768 502 aa22.07■■□□□ 1.12
CHD9-208ENST00000563410 ST3GAL2Q16842 350 aa22.07■■□□□ 1.12
CHD9-208ENST00000563410 SPDYCQ5MJ68 293 aa22.07■■□□□ 1.12
CHD9-208ENST00000563410 DAB2IPQ5VWQ8 1189 aa22.07■■□□□ 1.12
CHD9-208ENST00000563410 TOGARAM2Q6ZUX3 1019 aa22.07■■□□□ 1.12
CHD9-208ENST00000563410 CCDC186Q7Z3E2 898 aa22.07■■□□□ 1.12
CHD9-208ENST00000563410 ZNF276Q8N554 614 aa22.07■■□□□ 1.12
CHD9-208ENST00000563410 SEMA4DQ92854 862 aa22.07■■□□□ 1.12
CHD9-208ENST00000563410 XPO6Q96QU8 1125 aaKnown RBP22.07■■□□□ 1.12
CHD9-208ENST00000563410 ACOX2Q99424 681 aa22.07■■□□□ 1.12
CHD9-208ENST00000563410 DUSP16Q9BY84 665 aa22.07■■□□□ 1.12
CHD9-208ENST00000563410 WDR35Q9P2L0 1181 aa22.07■■□□□ 1.12
CHD9-208ENST00000563410 LSM7Q9UK45 103 aaKnown RBP22.07■■□□□ 1.12
CHD9-208ENST00000563410 USP3Q9Y6I4 520 aa22.07■■□□□ 1.12
CHD9-208ENST00000563410 ZFHX4Q86UP3 3567 aa22.07■■□□□ 1.12
CHD9-208ENST00000563410 CACNA1EQ15878 2313 aa22.06■■□□□ 1.12
CHD9-208ENST00000563410 PRRT4C9JH25 899 aa22.06■■□□□ 1.12
CHD9-208ENST00000563410 ZNF202O95125 648 aa22.06■■□□□ 1.12
CHD9-208ENST00000563410 CISD3P0C7P0 127 aa22.06■■□□□ 1.12
CHD9-208ENST00000563410 PLA2G4AP47712 749 aa22.06■■□□□ 1.12
CHD9-208ENST00000563410 NOVA1P51513 510 aaKnown RBP22.06■■□□□ 1.12
CHD9-208ENST00000563410 GOLGA8FQ08AF8 430 aa22.06■■□□□ 1.12
CHD9-208ENST00000563410 GOLGA8DPQ0D2H9 430 aa22.06■■□□□ 1.12
CHD9-208ENST00000563410 BYSLQ13895 437 aaKnown RBP22.06■■□□□ 1.12
CHD9-208ENST00000563410 ZNF394Q53GI3 561 aa22.06■■□□□ 1.12
CHD9-208ENST00000563410 C10orf120Q5SQS8 335 aa22.06■■□□□ 1.12
CHD9-208ENST00000563410 KRT39Q6A163 491 aa22.06■■□□□ 1.12
CHD9-208ENST00000563410 SYT12Q8IV01 421 aa22.06■■□□□ 1.12
CHD9-208ENST00000563410 DNMT3LQ9UJW3 386 aa22.06■■□□□ 1.12
CHD9-208ENST00000563410 NAGPAQ9UK23 515 aa22.06■■□□□ 1.12
CHD9-208ENST00000563410 STC2O76061 302 aa22.05■■□□□ 1.12
CHD9-208ENST00000563410 GTF2H1P32780 548 aa22.05■■□□□ 1.12
CHD9-208ENST00000563410 EDRF1Q3B7T1 1238 aa22.05■■□□□ 1.12
CHD9-208ENST00000563410 TRIM61Q5EBN2 209 aa22.05■■□□□ 1.12
CHD9-208ENST00000563410 PEAR1Q5VY43 1037 aaPredicted RBP22.05■■□□□ 1.12
CHD9-208ENST00000563410 SMYD4Q8IYR2 804 aaPredicted RBP22.05■■□□□ 1.12
CHD9-208ENST00000563410 EEF2KMTQ96G04 330 aa22.05■■□□□ 1.12
CHD9-208ENST00000563410 SCAND2PQ9GZW5 306 aaPredicted RBP22.05■■□□□ 1.12
CHD9-208ENST00000563410 CALCOCO1Q9P1Z2 691 aa22.05■■□□□ 1.12
CHD9-208ENST00000563410 FBXO10Q9UK96 956 aa22.05■■□□□ 1.12
CHD9-208ENST00000563410 PCDH15Q96QU1 1955 aa22.05■■□□□ 1.12
CHD9-208ENST00000563410 ATXN2Q99700 1313 aaKnown RBP22.05■■□□□ 1.12
CHD9-208ENST00000563410 ITPKAP23677 461 aa22.04■■□□□ 1.12
CHD9-208ENST00000563410 PSEN1P49768 467 aa22.04■■□□□ 1.12
CHD9-208ENST00000563410 SH3PXD2AQ5TCZ1 1133 aa22.04■■□□□ 1.12
CHD9-208ENST00000563410 LYSMD4Q5XG99 296 aa22.04■■□□□ 1.12
CHD9-208ENST00000563410 KIAA1211LQ6NV74 962 aa22.04■■□□□ 1.12
CHD9-208ENST00000563410 SLC4A11Q8NBS3 891 aa22.04■■□□□ 1.12
CHD9-208ENST00000563410 CCDC150Q8NCX0 1101 aa22.04■■□□□ 1.12
CHD9-208ENST00000563410 FAXDC2Q96IV6 333 aa22.04■■□□□ 1.12
CHD9-208ENST00000563410 HEXIM2Q96MH2 286 aaKnown RBP22.04■■□□□ 1.12
CHD9-208ENST00000563410 GABRG3Q99928 467 aa22.04■■□□□ 1.12
CHD9-208ENST00000563410 PLK2Q9NYY3 685 aa22.04■■□□□ 1.12
CHD9-208ENST00000563410 CLIC5Q9NZA1 410 aa22.04■■□□□ 1.12
CHD9-208ENST00000563410 PILRBQ9UKJ0 227 aa22.04■■□□□ 1.12
CHD9-208ENST00000563410 ASPMQ8IZT6 3477 aa22.03■■□□□ 1.12
CHD9-208ENST00000563410 KLKB1P03952 638 aa22.03■■□□□ 1.12
CHD9-208ENST00000563410 DGKGP49619 791 aa22.03■■□□□ 1.12
CHD9-208ENST00000563410 MXI1P50539 228 aa22.03■■□□□ 1.12
CHD9-208ENST00000563410 RAD23BP54727 409 aa22.03■■□□□ 1.12
CHD9-208ENST00000563410 SLC23A3Q6PIS1 610 aa22.03■■□□□ 1.12
CHD9-208ENST00000563410 CHPFQ8IZ52 775 aa22.03■■□□□ 1.12
CHD9-208ENST00000563410 FBXL13Q8NEE6 735 aa22.03■■□□□ 1.12
CHD9-208ENST00000563410 IPO4Q8TEX9 1081 aaKnown RBP22.03■■□□□ 1.12
CHD9-208ENST00000563410 BHMTQ93088 406 aa22.03■■□□□ 1.12
CHD9-208ENST00000563410 ARID3AQ99856 593 aa22.03■■□□□ 1.12
CHD9-208ENST00000563410 GDPD2Q9HCC8 539 aa22.03■■□□□ 1.12
CHD9-208ENST00000563410 CISHQ9NSE2 258 aa22.03■■□□□ 1.12
CHD9-208ENST00000563410 RAB20Q9NX57 234 aa22.03■■□□□ 1.12
CHD9-208ENST00000563410 IGHV1OR15-9A0A0B4J2B8 117 aa22.02■■□□□ 1.12
CHD9-208ENST00000563410 AP5Z1O43299 807 aa22.02■■□□□ 1.12
CHD9-208ENST00000563410 RALAP11233 206 aa22.02■■□□□ 1.12
CHD9-208ENST00000563410 NDUFV2P19404 249 aa22.02■■□□□ 1.12
CHD9-208ENST00000563410 CSRP1P21291 193 aaKnown RBP22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms