RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 NOA1Q8NC60 698 aaKnown RBP7.82□□□□□ -1.16
TCF4-216ENST00000562680 SPDYE1Q8NFV5 336 aaPredicted RBP7.82□□□□□ -1.16
TCF4-216ENST00000562680 WNT8BQ93098 351 aa7.82□□□□□ -1.16
TCF4-216ENST00000562680 ATP6V1G3Q96LB4 118 aa7.82□□□□□ -1.16
TCF4-216ENST00000562680 ENTPD7Q9NQZ7 604 aa7.82□□□□□ -1.16
TCF4-216ENST00000562680 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.82□□□□□ -1.16
TCF4-216ENST00000562680 SMG5Q9UPR3 1016 aaKnown RBP7.82□□□□□ -1.16
TCF4-216ENST00000562680 AAR2Q9Y312 384 aaKnown RBP7.82□□□□□ -1.16
TCF4-216ENST00000562680 TAF1LQ8IZX4 1826 aa7.82□□□□□ -1.16
TCF4-216ENST00000562680 A0A1B0GUL6 1792 aa7.82□□□□□ -1.16
TCF4-216ENST00000562680 RASA4BC9J798 803 aa7.82□□□□□ -1.16
TCF4-216ENST00000562680 RASA4O43374 803 aa7.82□□□□□ -1.16
TCF4-216ENST00000562680 CCDC15Q0P6D6 951 aa7.82□□□□□ -1.16
TCF4-216ENST00000562680 SMTNL2Q2TAL5 461 aa7.82□□□□□ -1.16
TCF4-216ENST00000562680 LRRC49Q8IUZ0 686 aa7.82□□□□□ -1.16
TCF4-216ENST00000562680 CCDC197Q8NCU1 140 aa7.82□□□□□ -1.16
TCF4-216ENST00000562680 TRIM51Q9BSJ1 452 aa7.82□□□□□ -1.16
TCF4-216ENST00000562680 TUBB6Q9BUF5 446 aa7.82□□□□□ -1.16
TCF4-216ENST00000562680 PSD3Q9NYI0 1048 aa7.82□□□□□ -1.16
TCF4-216ENST00000562680 SHOC2Q9UQ13 582 aa7.82□□□□□ -1.16
TCF4-216ENST00000562680 E5RJQ4 531 aa7.82□□□□□ -1.16
TCF4-216ENST00000562680 IGF2BP3O00425 579 aaKnown RBP eCLIP7.82□□□□□ -1.16
TCF4-216ENST00000562680 SYN3O14994 580 aa7.82□□□□□ -1.16
TCF4-216ENST00000562680 XYLBO75191 536 aa7.82□□□□□ -1.16
TCF4-216ENST00000562680 COQ9O75208 318 aa7.82□□□□□ -1.16
TCF4-216ENST00000562680 APRTP07741 180 aa7.82□□□□□ -1.16
TCF4-216ENST00000562680 CACNB2Q08289 660 aaPredicted RBP7.82□□□□□ -1.16
TCF4-216ENST00000562680 KRT72Q14CN4 511 aa7.82□□□□□ -1.16
TCF4-216ENST00000562680 RCN1Q15293 331 aa7.82□□□□□ -1.16
TCF4-216ENST00000562680 TAPT1Q6NXT6 567 aa7.82□□□□□ -1.16
TCF4-216ENST00000562680 RIN2Q8WYP3 895 aaPredicted RBP7.82□□□□□ -1.16
TCF4-216ENST00000562680 RPRD1AQ96P16 312 aaPredicted RBP7.82□□□□□ -1.16
TCF4-216ENST00000562680 GOLPH3Q9H4A6 298 aa7.82□□□□□ -1.16
TCF4-216ENST00000562680 ARVCFO00192 962 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 SLCO1A2P46721 670 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 DENND1BQ6P3S1 775 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 PACS2Q86VP3 889 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 PPM1NQ8N819 430 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 C1orf127Q8N9H9 656 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 TTC8Q8TAM2 541 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 SEMA4DQ92854 862 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 RILPQ96NA2 401 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 VPS9D1Q9Y2B5 631 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 EFR3BQ9Y2G0 817 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 HES2Q9Y543 173 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 LAMB1P07942 1786 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.81□□□□□ -1.16
TCF4-216ENST00000562680 NOL4O94818 638 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 CSH1P0DML2 217 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 CSH2P0DML3 217 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 MMP8P22894 467 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 ACAT1P24752 427 aaKnown RBP7.81□□□□□ -1.16
TCF4-216ENST00000562680 HADHBP55084 474 aaKnown RBP7.81□□□□□ -1.16
TCF4-216ENST00000562680 PURAQ00577 322 aaKnown RBP7.81□□□□□ -1.16
TCF4-216ENST00000562680 OTUD4Q01804 1114 aaKnown RBP7.81□□□□□ -1.16
TCF4-216ENST00000562680 MAMLD1Q13495 774 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 TRIM56Q9BRZ2 755 aaKnown RBP7.81□□□□□ -1.16
TCF4-216ENST00000562680 ACTR5Q9H9F9 607 aaPredicted RBP7.81□□□□□ -1.16
TCF4-216ENST00000562680 ZFATQ9P243 1243 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 ZC3H7BQ9UGR2 993 aaKnown RBP7.81□□□□□ -1.16
TCF4-216ENST00000562680 ADSSP30520 456 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 TBX4P57082 545 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 PPP2R2AP63151 447 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 CCL14Q16627 93 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 TMEM110Q86TL2 294 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 FAM131BQ86XD5 332 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 DEFB106AQ8N104 65 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 EMC1Q8N766 993 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 DUSP16Q9BY84 665 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 ULBP1Q9BZM6 244 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 NRDE2Q9H7Z3 1164 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 CYP4F11Q9HBI6 524 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 TMEM161AQ9NX61 479 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 XPO7Q9UIA9 1087 aaKnown RBP7.81□□□□□ -1.16
TCF4-216ENST00000562680 TRHDEQ9UKU6 1024 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 RWDD3Q9Y3V2 267 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 SLC12A8A0AV02 714 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 APOC4-APOC2K7ER74 178 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 FGF10O15520 208 aaPredicted RBP7.81□□□□□ -1.16
TCF4-216ENST00000562680 DAB1O75553 588 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 STAU1O95793 577 aaKnown RBP7.81□□□□□ -1.16
TCF4-216ENST00000562680 APOC2P02655 101 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 MBL2P11226 248 aaPredicted RBP7.81□□□□□ -1.16
TCF4-216ENST00000562680 ARPC4P59998 168 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 PPIGQ13427 754 aaKnown RBP eCLIP7.81□□□□□ -1.16
TCF4-216ENST00000562680 PDE1CQ14123 709 aaPredicted RBP7.81□□□□□ -1.16
TCF4-216ENST00000562680 HGSNATQ68CP4 663 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 IL31Q6EBC2 164 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 PIGZQ86VD9 579 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 FIBCD1Q8N539 461 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 PPP1R14BQ96C90 147 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 TSPAN17Q96FV3 270 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 HSD3B7Q9H2F3 369 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 MRPL17Q9NRX2 175 aaKnown RBP7.81□□□□□ -1.16
TCF4-216ENST00000562680 DNAJC17Q9NVM6 304 aaKnown RBP7.81□□□□□ -1.16
TCF4-216ENST00000562680 LMCD1Q9NZU5 365 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 TFR2Q9UP52 801 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 RAD54BQ9Y620 910 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 USH1CQ9Y6N9 552 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 CNMDO75829 334 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms