RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 DPF3Q92784 378 aa14.88□□□□□ -0.03
COMMD4-205ENST00000562310 MAGOHBQ96A72 148 aaKnown RBP14.88□□□□□ -0.03
COMMD4-205ENST00000562310 NTAN1Q96AB6 310 aa14.88□□□□□ -0.03
COMMD4-205ENST00000562310 ZNF670Q9BS34 389 aa14.88□□□□□ -0.03
COMMD4-205ENST00000562310 DDX47Q9H0S4 455 aaKnown RBP14.88□□□□□ -0.03
COMMD4-205ENST00000562310 SMOC2Q9H3U7 446 aa14.88□□□□□ -0.03
COMMD4-205ENST00000562310 LRRC19Q9H756 370 aa14.88□□□□□ -0.03
COMMD4-205ENST00000562310 PRDM16Q9HAZ2 1276 aa14.88□□□□□ -0.03
COMMD4-205ENST00000562310 RXFP1Q9HBX9 757 aa14.88□□□□□ -0.03
COMMD4-205ENST00000562310 STIM2Q9P246 746 aa14.88□□□□□ -0.03
COMMD4-205ENST00000562310 RCOR3Q9P2K3 495 aaPredicted RBP14.88□□□□□ -0.03
COMMD4-205ENST00000562310 RASAL2Q9UJF2 1139 aa14.88□□□□□ -0.03
COMMD4-205ENST00000562310 NAALADL1Q9UQQ1 740 aa14.88□□□□□ -0.03
COMMD4-205ENST00000562310 NR2E3Q9Y5X4 410 aa14.88□□□□□ -0.03
COMMD4-205ENST00000562310 FAM187AA6NFU0 413 aa14.87□□□□□ -0.03
COMMD4-205ENST00000562310 ATF2P15336 505 aa14.87□□□□□ -0.03
COMMD4-205ENST00000562310 RPL17P18621 184 aaKnown RBP14.87□□□□□ -0.03
COMMD4-205ENST00000562310 TFE3P19532 575 aaPredicted RBP14.87□□□□□ -0.03
COMMD4-205ENST00000562310 CTNNB1P35222 781 aa14.87□□□□□ -0.03
COMMD4-205ENST00000562310 GPR15P49685 360 aa14.87□□□□□ -0.03
COMMD4-205ENST00000562310 ARSEP51690 589 aa14.87□□□□□ -0.03
COMMD4-205ENST00000562310 ZNF135P52742 658 aaPredicted RBP14.87□□□□□ -0.03
COMMD4-205ENST00000562310 SCAPQ12770 1279 aa14.87□□□□□ -0.03
COMMD4-205ENST00000562310 IFRD2Q12894 506 aaPredicted RBP14.87□□□□□ -0.03
COMMD4-205ENST00000562310 DUSP4Q13115 394 aa14.87□□□□□ -0.03
COMMD4-205ENST00000562310 BRD3Q15059 726 aa14.87□□□□□ -0.03
COMMD4-205ENST00000562310 DPYSL2Q16555 572 aa14.87□□□□□ -0.03
COMMD4-205ENST00000562310 ARL13BQ3SXY8 428 aa14.87□□□□□ -0.03
COMMD4-205ENST00000562310 SYPL2Q5VXT5 272 aa14.87□□□□□ -0.03
COMMD4-205ENST00000562310 MSANTD2Q6P1R3 559 aa14.87□□□□□ -0.03
COMMD4-205ENST00000562310 BBS12Q6ZW61 710 aa14.87□□□□□ -0.03
COMMD4-205ENST00000562310 ADAT2Q7Z6V5 191 aaKnown RBP14.87□□□□□ -0.03
COMMD4-205ENST00000562310 PDZD8Q8NEN9 1154 aa14.87□□□□□ -0.03
COMMD4-205ENST00000562310 DQX1Q8TE96 717 aaKnown RBP14.87□□□□□ -0.03
COMMD4-205ENST00000562310 GRK7Q8WTQ7 553 aa14.87□□□□□ -0.03
COMMD4-205ENST00000562310 RNF139Q8WU17 664 aa14.87□□□□□ -0.03
COMMD4-205ENST00000562310 OVCA2Q8WZ82 227 aa14.87□□□□□ -0.03
COMMD4-205ENST00000562310 TSC1Q92574 1164 aa14.87□□□□□ -0.03
COMMD4-205ENST00000562310 FBXO32Q969P5 355 aa14.87□□□□□ -0.03
COMMD4-205ENST00000562310 ACSF2Q96CM8 615 aaPredicted RBP14.87□□□□□ -0.03
COMMD4-205ENST00000562310 LRRC1Q9BTT6 524 aa14.87□□□□□ -0.03
COMMD4-205ENST00000562310 TTLL2Q9BWV7 592 aa14.87□□□□□ -0.03
COMMD4-205ENST00000562310 CALN1Q9BXU9 219 aa14.87□□□□□ -0.03
COMMD4-205ENST00000562310 OLA1Q9NTK5 396 aaKnown RBP14.87□□□□□ -0.03
COMMD4-205ENST00000562310 DDIT4Q9NX09 232 aa14.87□□□□□ -0.03
COMMD4-205ENST00000562310 CLIC5Q9NZA1 410 aa14.87□□□□□ -0.03
COMMD4-205ENST00000562310 PCYOX1Q9UHG3 505 aa14.87□□□□□ -0.03
COMMD4-205ENST00000562310 FEZ2Q9UHY8 353 aaPredicted RBP14.87□□□□□ -0.03
COMMD4-205ENST00000562310 RAB21Q9UL25 225 aa14.87□□□□□ -0.03
COMMD4-205ENST00000562310 AP4E1Q9UPM8 1137 aa14.87□□□□□ -0.03
COMMD4-205ENST00000562310 TCRBV7S2A1N4TA0A589 114 aa14.86□□□□□ -0.03
COMMD4-205ENST00000562310 SLC38A8A6NNN8 435 aa14.86□□□□□ -0.03
COMMD4-205ENST00000562310 RAD51CO43502 376 aa14.86□□□□□ -0.03
COMMD4-205ENST00000562310 ERLIN1O75477 346 aa14.86□□□□□ -0.03
COMMD4-205ENST00000562310 IGLV3-25P01717 112 aa14.86□□□□□ -0.03
COMMD4-205ENST00000562310 TNFRSF8P28908 595 aa14.86□□□□□ -0.03
COMMD4-205ENST00000562310 BMPR1AP36894 532 aa14.86□□□□□ -0.03
COMMD4-205ENST00000562310 DR1Q01658 176 aa14.86□□□□□ -0.03
COMMD4-205ENST00000562310 UBE3AQ05086 875 aa14.86□□□□□ -0.03
COMMD4-205ENST00000562310 NME3Q13232 169 aa14.86□□□□□ -0.03
COMMD4-205ENST00000562310 PLD1Q13393 1074 aa14.86□□□□□ -0.03
COMMD4-205ENST00000562310 DPYSL3Q14195 570 aa14.86□□□□□ -0.03
COMMD4-205ENST00000562310 VEPH1Q14D04 833 aa14.86□□□□□ -0.03
COMMD4-205ENST00000562310 CCNG2Q16589 344 aa14.86□□□□□ -0.03
COMMD4-205ENST00000562310 RAB6CQ53S08 254 aa14.86□□□□□ -0.03
COMMD4-205ENST00000562310 EFHC2Q5JST6 749 aa14.86□□□□□ -0.03
COMMD4-205ENST00000562310 DRICH1Q6PGQ1 229 aaPredicted RBP14.86□□□□□ -0.03
COMMD4-205ENST00000562310 SCD5Q86SK9 330 aa14.86□□□□□ -0.03
COMMD4-205ENST00000562310 FAM131BQ86XD5 332 aa14.86□□□□□ -0.03
COMMD4-205ENST00000562310 KLHL23Q8NBE8 558 aa14.86□□□□□ -0.03
COMMD4-205ENST00000562310 EDEM1Q92611 657 aa14.86□□□□□ -0.03
COMMD4-205ENST00000562310 SLCO2A1Q92959 643 aa14.86□□□□□ -0.03
COMMD4-205ENST00000562310 SAMD11Q96NU1 681 aa14.86□□□□□ -0.03
COMMD4-205ENST00000562310 SERPINB11Q96P15 392 aa14.86□□□□□ -0.03
COMMD4-205ENST00000562310 CDK5RAP1Q96SZ6 601 aaKnown RBP14.86□□□□□ -0.03
COMMD4-205ENST00000562310 HEMGNQ9BXL5 484 aa14.86□□□□□ -0.03
COMMD4-205ENST00000562310 MAK16Q9BXY0 300 aaKnown RBP14.86□□□□□ -0.03
COMMD4-205ENST00000562310 PARD6BQ9BYG5 372 aa14.86□□□□□ -0.03
COMMD4-205ENST00000562310 ADAM33Q9BZ11 813 aa14.86□□□□□ -0.03
COMMD4-205ENST00000562310 DCLK3Q9C098 648 aa14.86□□□□□ -0.03
COMMD4-205ENST00000562310 RAB6CQ9H0N0 254 aa14.86□□□□□ -0.03
COMMD4-205ENST00000562310 RAB17Q9H0T7 212 aa14.86□□□□□ -0.03
COMMD4-205ENST00000562310 CRISPLD1Q9H336 500 aa14.86□□□□□ -0.03
COMMD4-205ENST00000562310 PCDH18Q9HCL0 1135 aa14.86□□□□□ -0.03
COMMD4-205ENST00000562310 TLR8Q9NR97 1041 aaKnown RBP14.86□□□□□ -0.03
COMMD4-205ENST00000562310 PIGVQ9NUD9 493 aa14.86□□□□□ -0.03
COMMD4-205ENST00000562310 FZD10Q9ULW2 581 aa14.86□□□□□ -0.03
COMMD4-205ENST00000562310 SLC27A5Q9Y2P5 690 aa14.86□□□□□ -0.03
COMMD4-205ENST00000562310 NR2E1Q9Y466 385 aa14.86□□□□□ -0.03
COMMD4-205ENST00000562310 GBF1Q92538 1859 aa14.86□□□□□ -0.03
COMMD4-205ENST00000562310 A0A1W2PQH9 124 aa14.85□□□□□ -0.03
COMMD4-205ENST00000562310 CCDC151A5D8V7 595 aa14.85□□□□□ -0.03
COMMD4-205ENST00000562310 LILRB3O75022 631 aa14.85□□□□□ -0.03
COMMD4-205ENST00000562310 HEXIM1O94992 359 aaKnown RBP14.85□□□□□ -0.03
COMMD4-205ENST00000562310 CSH1P0DML2 217 aa14.85□□□□□ -0.03
COMMD4-205ENST00000562310 CSH2P0DML3 217 aa14.85□□□□□ -0.03
COMMD4-205ENST00000562310 H2AFXP16104 143 aaPredicted RBP14.85□□□□□ -0.03
COMMD4-205ENST00000562310 ATF6P18850 670 aa14.85□□□□□ -0.03
COMMD4-205ENST00000562310 DNAJB2P25686 324 aa14.85□□□□□ -0.03
COMMD4-205ENST00000562310 ELF1P32519 619 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms