RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 CCDC192P0DO97 292 aa13.28□□□□□ -0.28
CHRNA3-208ENST00000561128 CORO1AP31146 461 aaKnown RBP13.28□□□□□ -0.28
CHRNA3-208ENST00000561128 HOXA6P31267 233 aa13.28□□□□□ -0.28
CHRNA3-208ENST00000561128 TIE1P35590 1138 aa13.28□□□□□ -0.28
CHRNA3-208ENST00000561128 SGSHP51688 502 aa13.28□□□□□ -0.28
CHRNA3-208ENST00000561128 DAOAP59103 153 aa13.28□□□□□ -0.28
CHRNA3-208ENST00000561128 YWHAEP62258 255 aaKnown RBP13.28□□□□□ -0.28
CHRNA3-208ENST00000561128 NR1H3Q13133 447 aa13.28□□□□□ -0.28
CHRNA3-208ENST00000561128 ANO4Q32M45 955 aa13.28□□□□□ -0.28
CHRNA3-208ENST00000561128 PRR23BQ6ZRT6 265 aa13.28□□□□□ -0.28
CHRNA3-208ENST00000561128 CREBRFQ8IUR6 639 aa13.28□□□□□ -0.28
CHRNA3-208ENST00000561128 IL17RCQ8NAC3 791 aa13.28□□□□□ -0.28
CHRNA3-208ENST00000561128 MLKLQ8NB16 471 aa13.28□□□□□ -0.28
CHRNA3-208ENST00000561128 RUBCNQ92622 972 aa13.28□□□□□ -0.28
CHRNA3-208ENST00000561128 PIWIL1Q96J94 861 aaKnown RBP13.28□□□□□ -0.28
CHRNA3-208ENST00000561128 PNKPQ96T60 521 aa13.28□□□□□ -0.28
CHRNA3-208ENST00000561128 ACOX2Q99424 681 aa13.28□□□□□ -0.28
CHRNA3-208ENST00000561128 FAM126AQ9BYI3 521 aaPredicted RBP13.28□□□□□ -0.28
CHRNA3-208ENST00000561128 TPSD1Q9BZJ3 242 aa13.28□□□□□ -0.28
CHRNA3-208ENST00000561128 UBXN6Q9BZV1 441 aa13.28□□□□□ -0.28
CHRNA3-208ENST00000561128 UBE2TQ9NPD8 197 aaPredicted RBP13.28□□□□□ -0.28
CHRNA3-208ENST00000561128 SAMSN1Q9NSI8 373 aaKnown RBP13.28□□□□□ -0.28
CHRNA3-208ENST00000561128 TBC1D14Q9P2M4 693 aa13.28□□□□□ -0.28
CHRNA3-208ENST00000561128 SFMBT1Q9UHJ3 866 aa13.28□□□□□ -0.28
CHRNA3-208ENST00000561128 INVSQ9Y283 1065 aa13.28□□□□□ -0.28
CHRNA3-208ENST00000561128 ZNF292O60281 2723 aa13.28□□□□□ -0.28
CHRNA3-208ENST00000561128 FRYLO94915 3013 aa13.27□□□□□ -0.28
CHRNA3-208ENST00000561128 RIF1Q5UIP0 2472 aaKnown RBP13.27□□□□□ -0.29
CHRNA3-208ENST00000561128 SLC12A8A0AV02 714 aa13.27□□□□□ -0.29
CHRNA3-208ENST00000561128 PRRT4C9JH25 899 aa13.27□□□□□ -0.29
CHRNA3-208ENST00000561128 CACNG3O60359 315 aa13.27□□□□□ -0.29
CHRNA3-208ENST00000561128 KLF8O95600 359 aaPredicted RBP13.27□□□□□ -0.29
CHRNA3-208ENST00000561128 FYNP06241 537 aa13.27□□□□□ -0.29
CHRNA3-208ENST00000561128 SETSIPP0DME0 302 aa13.27□□□□□ -0.29
CHRNA3-208ENST00000561128 KRT5P13647 590 aa13.27□□□□□ -0.29
CHRNA3-208ENST00000561128 TYRP14679 529 aa13.27□□□□□ -0.29
CHRNA3-208ENST00000561128 TRIM21P19474 475 aaKnown RBP13.27□□□□□ -0.29
CHRNA3-208ENST00000561128 PON1P27169 355 aa13.27□□□□□ -0.29
CHRNA3-208ENST00000561128 EIF2DP41214 584 aaKnown RBP13.27□□□□□ -0.29
CHRNA3-208ENST00000561128 CCDC6Q16204 474 aa13.27□□□□□ -0.29
CHRNA3-208ENST00000561128 CNGA2Q16280 664 aa13.27□□□□□ -0.29
CHRNA3-208ENST00000561128 FBXO43Q4G163 708 aa13.27□□□□□ -0.29
CHRNA3-208ENST00000561128 EGFLAMQ63HQ2 1017 aa13.27□□□□□ -0.29
CHRNA3-208ENST00000561128 C11orf57Q6ZUT1 292 aaPredicted RBP13.27□□□□□ -0.29
CHRNA3-208ENST00000561128 SYT13Q7L8C5 426 aa13.27□□□□□ -0.29
CHRNA3-208ENST00000561128 KBTBD6Q86V97 674 aa13.27□□□□□ -0.29
CHRNA3-208ENST00000561128 FAM160A2Q8N612 972 aaPredicted RBP13.27□□□□□ -0.29
CHRNA3-208ENST00000561128 TERB1Q8NA31 727 aa13.27□□□□□ -0.29
CHRNA3-208ENST00000561128 TXNDC5Q8NBS9 432 aaKnown RBP13.27□□□□□ -0.29
CHRNA3-208ENST00000561128 KCTD13Q8WZ19 329 aa13.27□□□□□ -0.29
CHRNA3-208ENST00000561128 OTUB2Q96DC9 234 aa13.27□□□□□ -0.29
CHRNA3-208ENST00000561128 MYEOVQ96EZ4 313 aa13.27□□□□□ -0.29
CHRNA3-208ENST00000561128 HINFPQ9BQA5 517 aa13.27□□□□□ -0.29
CHRNA3-208ENST00000561128 BBS2Q9BXC9 721 aa13.27□□□□□ -0.29
CHRNA3-208ENST00000561128 LRRC4Q9HBW1 653 aa13.27□□□□□ -0.29
CHRNA3-208ENST00000561128 DNAJC17Q9NVM6 304 aaKnown RBP13.27□□□□□ -0.29
CHRNA3-208ENST00000561128 MARK1Q9P0L2 795 aa13.27□□□□□ -0.29
CHRNA3-208ENST00000561128 MARCH2Q9P0N8 246 aa13.27□□□□□ -0.29
CHRNA3-208ENST00000561128 NCDNQ9UBB6 729 aa13.27□□□□□ -0.29
CHRNA3-208ENST00000561128 HESX1Q9UBX0 185 aa13.27□□□□□ -0.29
CHRNA3-208ENST00000561128 AGO1Q9UL18 857 aaKnown RBP13.27□□□□□ -0.29
CHRNA3-208ENST00000561128 MMP17Q9ULZ9 603 aa13.27□□□□□ -0.29
CHRNA3-208ENST00000561128 CISD3P0C7P0 127 aa13.26□□□□□ -0.29
CHRNA3-208ENST00000561128 RALAP11233 206 aa13.26□□□□□ -0.29
CHRNA3-208ENST00000561128 BCKDHBP21953 392 aa13.26□□□□□ -0.29
CHRNA3-208ENST00000561128 WASP42768 502 aa13.26□□□□□ -0.29
CHRNA3-208ENST00000561128 NRLP54845 237 aa13.26□□□□□ -0.29
CHRNA3-208ENST00000561128 PITX1P78337 314 aaPredicted RBP13.26□□□□□ -0.29
CHRNA3-208ENST00000561128 AMPD2Q01433 879 aa13.26□□□□□ -0.29
CHRNA3-208ENST00000561128 GAD2Q05329 585 aa13.26□□□□□ -0.29
CHRNA3-208ENST00000561128 EP300Q09472 2414 aaPredicted RBP13.26□□□□□ -0.29
CHRNA3-208ENST00000561128 SIM2Q14190 667 aaPredicted RBP13.26□□□□□ -0.29
CHRNA3-208ENST00000561128 ARHGAP44Q17R89 818 aa13.26□□□□□ -0.29
CHRNA3-208ENST00000561128 C10orf76Q5T2E6 689 aa13.26□□□□□ -0.29
CHRNA3-208ENST00000561128 FYB2Q5VWT5 728 aa13.26□□□□□ -0.29
CHRNA3-208ENST00000561128 BSPRYQ5W0U4 402 aa13.26□□□□□ -0.29
CHRNA3-208ENST00000561128 RBM43Q6ZSC3 357 aaKnown RBP13.26□□□□□ -0.29
CHRNA3-208ENST00000561128 DENND1CQ8IV53 801 aa13.26□□□□□ -0.29
CHRNA3-208ENST00000561128 FMNL3Q8IVF7 1028 aa13.26□□□□□ -0.29
CHRNA3-208ENST00000561128 ZNF276Q8N554 614 aa13.26□□□□□ -0.29
CHRNA3-208ENST00000561128 FRMD1Q8N878 549 aa13.26□□□□□ -0.29
CHRNA3-208ENST00000561128 MDGA1Q8NFP4 955 aa13.26□□□□□ -0.29
CHRNA3-208ENST00000561128 SHC3Q92529 594 aa13.26□□□□□ -0.29
CHRNA3-208ENST00000561128 RMDN1Q96DB5 314 aa13.26□□□□□ -0.29
CHRNA3-208ENST00000561128 MIS12Q9H081 205 aa13.26□□□□□ -0.29
CHRNA3-208ENST00000561128 SMOC1Q9H4F8 434 aa13.26□□□□□ -0.29
CHRNA3-208ENST00000561128 CD248Q9HCU0 757 aa13.26□□□□□ -0.29
CHRNA3-208ENST00000561128 CD93Q9NPY3 652 aa13.26□□□□□ -0.29
CHRNA3-208ENST00000561128 SLC8A2Q9UPR5 921 aa13.26□□□□□ -0.29
CHRNA3-208ENST00000561128 DMXL1Q9Y485 3027 aa13.26□□□□□ -0.29
CHRNA3-208ENST00000561128 A0A0A0MRY4 1105 aa13.25□□□□□ -0.29
CHRNA3-208ENST00000561128 GFRA2O00451 464 aa13.25□□□□□ -0.29
CHRNA3-208ENST00000561128 AXIN1O15169 862 aa13.25□□□□□ -0.29
CHRNA3-208ENST00000561128 LETM1O95202 739 aaPredicted RBP13.25□□□□□ -0.29
CHRNA3-208ENST00000561128 PENKP01210 267 aaPredicted RBP13.25□□□□□ -0.29
CHRNA3-208ENST00000561128 APODP05090 189 aa13.25□□□□□ -0.29
CHRNA3-208ENST00000561128 GRIA2P42262 883 aa13.25□□□□□ -0.29
CHRNA3-208ENST00000561128 GPD2P43304 727 aa13.25□□□□□ -0.29
CHRNA3-208ENST00000561128 MTIF2P46199 727 aaKnown RBP13.25□□□□□ -0.29
CHRNA3-208ENST00000561128 PSEN1P49768 467 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms