RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 NCOR2Q9Y618 2525 aa16.77■□□□□ 0.28
LMX1B-204ENST00000561065 A0A0A0MRY4 1105 aa16.77■□□□□ 0.28
LMX1B-204ENST00000561065 MED19A0JLT2 244 aaPredicted RBP16.77■□□□□ 0.28
LMX1B-204ENST00000561065 STC2O76061 302 aa16.77■□□□□ 0.28
LMX1B-204ENST00000561065 EPN2O95208 641 aa16.77■□□□□ 0.28
LMX1B-204ENST00000561065 KLF8O95600 359 aaPredicted RBP16.77■□□□□ 0.28
LMX1B-204ENST00000561065 GRIA2P42262 883 aa16.77■□□□□ 0.28
LMX1B-204ENST00000561065 STX17P56962 302 aa16.77■□□□□ 0.28
LMX1B-204ENST00000561065 MRPS21P82921 87 aaKnown RBP16.77■□□□□ 0.28
LMX1B-204ENST00000561065 PDE4CQ08493 712 aa16.77■□□□□ 0.28
LMX1B-204ENST00000561065 CRY1Q16526 586 aa16.77■□□□□ 0.28
LMX1B-204ENST00000561065 ANO4Q32M45 955 aa16.77■□□□□ 0.28
LMX1B-204ENST00000561065 PLK5Q496M5 336 aa16.77■□□□□ 0.28
LMX1B-204ENST00000561065 ANO7Q6IWH7 933 aa16.77■□□□□ 0.28
LMX1B-204ENST00000561065 CACNA2D4Q7Z3S7 1137 aa16.77■□□□□ 0.28
LMX1B-204ENST00000561065 TERB1Q8NA31 727 aa16.77■□□□□ 0.28
LMX1B-204ENST00000561065 ANKRD52Q8NB46 1076 aa16.77■□□□□ 0.28
LMX1B-204ENST00000561065 NDRG1Q92597 394 aaKnown RBP16.77■□□□□ 0.28
LMX1B-204ENST00000561065 ZSWIM1Q9BR11 485 aa16.77■□□□□ 0.28
LMX1B-204ENST00000561065 SRRTQ9BXP5 876 aaKnown RBP16.77■□□□□ 0.28
LMX1B-204ENST00000561065 DUSP15Q9H1R2 295 aaPredicted RBP16.77■□□□□ 0.28
LMX1B-204ENST00000561065 CLSTN2Q9H4D0 955 aa16.77■□□□□ 0.28
LMX1B-204ENST00000561065 CLIC5Q9NZA1 410 aa16.77■□□□□ 0.28
LMX1B-204ENST00000561065 DNMT3LQ9UJW3 386 aa16.77■□□□□ 0.28
LMX1B-204ENST00000561065 KIAA1257Q9ULG3 409 aa16.77■□□□□ 0.28
LMX1B-204ENST00000561065 SPTBN2O15020 2390 aa16.77■□□□□ 0.27
LMX1B-204ENST00000561065 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.76■□□□□ 0.27
LMX1B-204ENST00000561065 NEDD8-MDP1E9PL57 170 aa16.76■□□□□ 0.27
LMX1B-204ENST00000561065 O00370 1275 aa16.76■□□□□ 0.27
LMX1B-204ENST00000561065 CACNG3O60359 315 aa16.76■□□□□ 0.27
LMX1B-204ENST00000561065 GDF9O60383 454 aa16.76■□□□□ 0.27
LMX1B-204ENST00000561065 CALCAP01258 141 aa16.76■□□□□ 0.27
LMX1B-204ENST00000561065 KLKB1P03952 638 aa16.76■□□□□ 0.27
LMX1B-204ENST00000561065 PSEN1P49768 467 aa16.76■□□□□ 0.27
LMX1B-204ENST00000561065 DGKEP52429 567 aa16.76■□□□□ 0.27
LMX1B-204ENST00000561065 ATXN1P54253 815 aaKnown RBP16.76■□□□□ 0.27
LMX1B-204ENST00000561065 BCAT1P54687 386 aa16.76■□□□□ 0.27
LMX1B-204ENST00000561065 CSRP2Q16527 193 aa16.76■□□□□ 0.27
LMX1B-204ENST00000561065 PKDCCQ504Y2 493 aa16.76■□□□□ 0.27
LMX1B-204ENST00000561065 TOGARAM2Q6ZUX3 1019 aa16.76■□□□□ 0.27
LMX1B-204ENST00000561065 DGLUCYQ7Z3D6 616 aa16.76■□□□□ 0.27
LMX1B-204ENST00000561065 MIB1Q86YT6 1006 aa16.76■□□□□ 0.27
LMX1B-204ENST00000561065 FAM114A1Q8IWE2 563 aa16.76■□□□□ 0.27
LMX1B-204ENST00000561065 ZNF276Q8N554 614 aa16.76■□□□□ 0.27
LMX1B-204ENST00000561065 TFAP2BQ92481 460 aa16.76■□□□□ 0.27
LMX1B-204ENST00000561065 ZC3H10Q96K80 434 aaKnown RBP16.76■□□□□ 0.27
LMX1B-204ENST00000561065 CNOT6LQ96LI5 555 aaKnown RBP16.76■□□□□ 0.27
LMX1B-204ENST00000561065 FAM81BQ96LP2 452 aa16.76■□□□□ 0.27
LMX1B-204ENST00000561065 ULBP1Q9BZM6 244 aa16.76■□□□□ 0.27
LMX1B-204ENST00000561065 ARRDC1-AS1Q9H2J1 176 aa16.76■□□□□ 0.27
LMX1B-204ENST00000561065 MARK1Q9P0L2 795 aa16.76■□□□□ 0.27
LMX1B-204ENST00000561065 RASAL2Q9UJF2 1139 aa16.76■□□□□ 0.27
LMX1B-204ENST00000561065 INVSQ9Y283 1065 aa16.76■□□□□ 0.27
LMX1B-204ENST00000561065 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.76■□□□□ 0.27
LMX1B-204ENST00000561065 RNF225M0QZC1 329 aaPredicted RBP16.75■□□□□ 0.27
LMX1B-204ENST00000561065 XPO1O14980 1071 aaKnown RBP16.75■□□□□ 0.27
LMX1B-204ENST00000561065 TYRP14679 529 aa16.75■□□□□ 0.27
LMX1B-204ENST00000561065 CD19P15391 556 aa16.75■□□□□ 0.27
LMX1B-204ENST00000561065 BCKDHBP21953 392 aa16.75■□□□□ 0.27
LMX1B-204ENST00000561065 TKTL1P51854 596 aa16.75■□□□□ 0.27
LMX1B-204ENST00000561065 MARSP56192 900 aaKnown RBP16.75■□□□□ 0.27
LMX1B-204ENST00000561065 EFEMP1Q12805 493 aa16.75■□□□□ 0.27
LMX1B-204ENST00000561065 SF3A2Q15428 464 aaKnown RBP16.75■□□□□ 0.27
LMX1B-204ENST00000561065 SGO2Q562F6 1265 aa16.75■□□□□ 0.27
LMX1B-204ENST00000561065 TPGS1Q6ZTW0 290 aa16.75■□□□□ 0.27
LMX1B-204ENST00000561065 CREBRFQ8IUR6 639 aa16.75■□□□□ 0.27
LMX1B-204ENST00000561065 ARHGEF19Q8IW93 802 aa16.75■□□□□ 0.27
LMX1B-204ENST00000561065 TRIM59Q8IWR1 403 aa16.75■□□□□ 0.27
LMX1B-204ENST00000561065 CCDC26Q8TAB7 109 aa16.75■□□□□ 0.27
LMX1B-204ENST00000561065 NT5C1BQ96P26 610 aa16.75■□□□□ 0.27
LMX1B-204ENST00000561065 BBS2Q9BXC9 721 aa16.75■□□□□ 0.27
LMX1B-204ENST00000561065 UBXN6Q9BZV1 441 aa16.75■□□□□ 0.27
LMX1B-204ENST00000561065 SMOC1Q9H4F8 434 aa16.75■□□□□ 0.27
LMX1B-204ENST00000561065 RXFP3Q9NSD7 469 aa16.75■□□□□ 0.27
LMX1B-204ENST00000561065 DNAJC17Q9NVM6 304 aaKnown RBP16.75■□□□□ 0.27
LMX1B-204ENST00000561065 LSM7Q9UK45 103 aaKnown RBP16.75■□□□□ 0.27
LMX1B-204ENST00000561065 CDV3Q9UKY7 258 aaKnown RBP16.75■□□□□ 0.27
LMX1B-204ENST00000561065 PRR5-ARHGAP8B1AHC4 643 aa16.74■□□□□ 0.27
LMX1B-204ENST00000561065 GABBR2O75899 941 aa16.74■□□□□ 0.27
LMX1B-204ENST00000561065 RALAP11233 206 aa16.74■□□□□ 0.27
LMX1B-204ENST00000561065 ERCC5P28715 1186 aaPredicted RBP16.74■□□□□ 0.27
LMX1B-204ENST00000561065 TNFRSF4P43489 277 aa16.74■□□□□ 0.27
LMX1B-204ENST00000561065 PLA2G4AP47712 749 aa16.74■□□□□ 0.27
LMX1B-204ENST00000561065 YWHAGP61981 247 aaKnown RBP eCLIP16.74■□□□□ 0.27
LMX1B-204ENST00000561065 ARHGAP8P85298 464 aa16.74■□□□□ 0.27
LMX1B-204ENST00000561065 FOXK2Q01167 660 aa16.74■□□□□ 0.27
LMX1B-204ENST00000561065 ADIGQ0VDE8 80 aa16.74■□□□□ 0.27
LMX1B-204ENST00000561065 BST2Q10589 180 aaKnown RBP16.74■□□□□ 0.27
LMX1B-204ENST00000561065 PLA2G2CQ5R387 149 aa16.74■□□□□ 0.27
LMX1B-204ENST00000561065 C10orf76Q5T2E6 689 aa16.74■□□□□ 0.27
LMX1B-204ENST00000561065 BTBD8Q5XKL5 378 aa16.74■□□□□ 0.27
LMX1B-204ENST00000561065 EGFLAMQ63HQ2 1017 aa16.74■□□□□ 0.27
LMX1B-204ENST00000561065 PM20D1Q6GTS8 502 aa16.74■□□□□ 0.27
LMX1B-204ENST00000561065 TMEM270Q6UE05 265 aa16.74■□□□□ 0.27
LMX1B-204ENST00000561065 OLIG1Q8TAK6 271 aa16.74■□□□□ 0.27
LMX1B-204ENST00000561065 UBA3Q8TBC4 463 aa16.74■□□□□ 0.27
LMX1B-204ENST00000561065 BHMTQ93088 406 aa16.74■□□□□ 0.27
LMX1B-204ENST00000561065 LOXL4Q96JB6 756 aa16.74■□□□□ 0.27
LMX1B-204ENST00000561065 MED15Q96RN5 788 aa16.74■□□□□ 0.27
LMX1B-204ENST00000561065 DEC1Q9P2X7 70 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms