RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 PUS7LQ9H0K6 701 aaKnown RBP4.32□□□□□ -1.72
HERC1-211ENST00000560983 NELFAQ9H3P2 528 aa4.32□□□□□ -1.72
HERC1-211ENST00000560983 ARPP21Q9UBL0 812 aaPredicted RBP4.32□□□□□ -1.72
HERC1-211ENST00000560983 Q9UFV3 132 aa4.32□□□□□ -1.72
HERC1-211ENST00000560983 PFDN2Q9UHV9 154 aa4.32□□□□□ -1.72
HERC1-211ENST00000560983 ASB1Q9Y576 335 aa4.32□□□□□ -1.72
HERC1-211ENST00000560983 B3GALT1Q9Y5Z6 326 aa4.32□□□□□ -1.72
HERC1-211ENST00000560983 TEX15Q9BXT5 2789 aa4.32□□□□□ -1.72
HERC1-211ENST00000560983 PIEZO2Q9H5I5 2752 aa4.32□□□□□ -1.72
HERC1-211ENST00000560983 LCTP09848 1927 aa4.32□□□□□ -1.72
HERC1-211ENST00000560983 TEP1Q99973 2627 aaKnown RBP4.32□□□□□ -1.72
HERC1-211ENST00000560983 PLXNA4Q9HCM2 1894 aa4.31□□□□□ -1.72
HERC1-211ENST00000560983 CLUHO75153 1309 aa4.31□□□□□ -1.72
HERC1-211ENST00000560983 WDR19Q8NEZ3 1342 aa4.31□□□□□ -1.72
HERC1-211ENST00000560983 GOLIM4O00461 696 aa4.31□□□□□ -1.72
HERC1-211ENST00000560983 CDX4O14627 284 aaPredicted RBP4.31□□□□□ -1.72
HERC1-211ENST00000560983 NMT2O60551 498 aa4.31□□□□□ -1.72
HERC1-211ENST00000560983 RFPL2O75678 378 aa4.31□□□□□ -1.72
HERC1-211ENST00000560983 SURF6O75683 361 aaKnown RBP4.31□□□□□ -1.72
HERC1-211ENST00000560983 ZNF202O95125 648 aa4.31□□□□□ -1.72
HERC1-211ENST00000560983 EPN2O95208 641 aa4.31□□□□□ -1.72
HERC1-211ENST00000560983 MMEP08473 750 aa4.31□□□□□ -1.72
HERC1-211ENST00000560983 GNAI3P08754 354 aa4.31□□□□□ -1.72
HERC1-211ENST00000560983 CNPP09543 421 aaKnown RBP4.31□□□□□ -1.72
HERC1-211ENST00000560983 SRGAP2CP0DJJ0 459 aa4.31□□□□□ -1.72
HERC1-211ENST00000560983 KRT15P19012 456 aa4.31□□□□□ -1.72
HERC1-211ENST00000560983 ADCY8P40145 1251 aa4.31□□□□□ -1.72
HERC1-211ENST00000560983 CXCL12P48061 93 aa4.31□□□□□ -1.72
HERC1-211ENST00000560983 DGCR2P98153 550 aa4.31□□□□□ -1.72
HERC1-211ENST00000560983 GIT2Q14161 759 aa4.31□□□□□ -1.72
HERC1-211ENST00000560983 FHL2Q14192 279 aa4.31□□□□□ -1.72
HERC1-211ENST00000560983 FNDC7Q5VTL7 733 aa4.31□□□□□ -1.72
HERC1-211ENST00000560983 KCNV1Q6PIU1 500 aa4.31□□□□□ -1.72
HERC1-211ENST00000560983 ZNF852Q6ZMS4 543 aa4.31□□□□□ -1.72
HERC1-211ENST00000560983 OVCH1Q7RTY7 1134 aa4.31□□□□□ -1.72
HERC1-211ENST00000560983 DDX53Q86TM3 631 aaKnown RBP4.31□□□□□ -1.72
HERC1-211ENST00000560983 RSPH3Q86UC2 560 aa4.31□□□□□ -1.72
HERC1-211ENST00000560983 OR14A2Q96R54 314 aa4.31□□□□□ -1.72
HERC1-211ENST00000560983 STRBPQ96SI9 672 aaKnown RBP4.31□□□□□ -1.72
HERC1-211ENST00000560983 VN1R3Q9BXE9 311 aa4.31□□□□□ -1.72
HERC1-211ENST00000560983 MAF1Q9H063 256 aa4.31□□□□□ -1.72
HERC1-211ENST00000560983 CLMPQ9H6B4 373 aa4.31□□□□□ -1.72
HERC1-211ENST00000560983 ELAC1Q9H777 363 aaKnown RBP4.31□□□□□ -1.72
HERC1-211ENST00000560983 PRKRIP1Q9H875 184 aaPredicted RBP4.31□□□□□ -1.72
HERC1-211ENST00000560983 MLXIPQ9HAP2 919 aa4.31□□□□□ -1.72
HERC1-211ENST00000560983 LMAN1LQ9HAT1 526 aa4.31□□□□□ -1.72
HERC1-211ENST00000560983 ATP6V0A4Q9HBG4 840 aa4.31□□□□□ -1.72
HERC1-211ENST00000560983 PXMP2Q9NR77 195 aa4.31□□□□□ -1.72
HERC1-211ENST00000560983 KCNH7Q9NS40 1196 aa4.31□□□□□ -1.72
HERC1-211ENST00000560983 C1orf112Q9NSG2 853 aa4.31□□□□□ -1.72
HERC1-211ENST00000560983 SMC4Q9NTJ3 1288 aa4.31□□□□□ -1.72
HERC1-211ENST00000560983 C2orf42Q9NWW7 574 aa4.31□□□□□ -1.72
HERC1-211ENST00000560983 TMEM161AQ9NX61 479 aa4.31□□□□□ -1.72
HERC1-211ENST00000560983 PLA2G3Q9NZ20 509 aa4.31□□□□□ -1.72
HERC1-211ENST00000560983 NOB1Q9ULX3 412 aaKnown RBP4.31□□□□□ -1.72
HERC1-211ENST00000560983 NOP58Q9Y2X3 529 aaKnown RBP4.31□□□□□ -1.72
HERC1-211ENST00000560983 NOC2LQ9Y3T9 749 aaKnown RBP4.31□□□□□ -1.72
HERC1-211ENST00000560983 PLIN4Q96Q06 1357 aa4.3□□□□□ -1.72
HERC1-211ENST00000560983 KDM3AQ9Y4C1 1321 aa4.3□□□□□ -1.72
HERC1-211ENST00000560983 SPTA1P02549 2419 aa4.3□□□□□ -1.72
HERC1-211ENST00000560983 KRTAP23-1A1A580 65 aa4.3□□□□□ -1.72
HERC1-211ENST00000560983 KCNK3O14649 394 aa4.3□□□□□ -1.72
HERC1-211ENST00000560983 INPPL1O15357 1258 aa4.3□□□□□ -1.72
HERC1-211ENST00000560983 PAPSS2O95340 614 aaPredicted RBP4.3□□□□□ -1.72
HERC1-211ENST00000560983 GNAI2P04899 355 aa4.3□□□□□ -1.72
HERC1-211ENST00000560983 C1SP09871 688 aa4.3□□□□□ -1.72
HERC1-211ENST00000560983 TSPY3P0CV98 308 aa4.3□□□□□ -1.72
HERC1-211ENST00000560983 TSPY8P0CW00 308 aa4.3□□□□□ -1.72
HERC1-211ENST00000560983 MYBP10242 640 aa4.3□□□□□ -1.72
HERC1-211ENST00000560983 CHRNB1P11230 501 aa4.3□□□□□ -1.72
HERC1-211ENST00000560983 KLRC2P26717 231 aa4.3□□□□□ -1.72
HERC1-211ENST00000560983 HOXA6P31267 233 aa4.3□□□□□ -1.72
HERC1-211ENST00000560983 CA8P35219 290 aa4.3□□□□□ -1.72
HERC1-211ENST00000560983 METAP2P50579 478 aaKnown RBP eCLIP4.3□□□□□ -1.72
HERC1-211ENST00000560983 CCR3P51677 355 aa4.3□□□□□ -1.72
HERC1-211ENST00000560983 POLGP54098 1239 aaPredicted RBP4.3□□□□□ -1.72
HERC1-211ENST00000560983 BCAR1P56945 870 aa4.3□□□□□ -1.72
HERC1-211ENST00000560983 ABHD18Q0P651 414 aa4.3□□□□□ -1.72
HERC1-211ENST00000560983 BMS1Q14692 1282 aaKnown RBP4.3□□□□□ -1.72
HERC1-211ENST00000560983 UBE3CQ15386 1083 aa4.3□□□□□ -1.72
HERC1-211ENST00000560983 CLLU1OSQ5K130 101 aa4.3□□□□□ -1.72
HERC1-211ENST00000560983 UTP14CQ5TAP6 766 aaKnown RBP4.3□□□□□ -1.72
HERC1-211ENST00000560983 ARHGEF16Q5VV41 709 aa4.3□□□□□ -1.72
HERC1-211ENST00000560983 DAB2IPQ5VWQ8 1189 aa4.3□□□□□ -1.72
HERC1-211ENST00000560983 GRAMD4Q6IC98 578 aa4.3□□□□□ -1.72
HERC1-211ENST00000560983 GIMAP6Q6P9H5 292 aa4.3□□□□□ -1.72
HERC1-211ENST00000560983 METTL7BQ6UX53 244 aa4.3□□□□□ -1.72
HERC1-211ENST00000560983 FAM43BQ6ZT52 329 aaPredicted RBP4.3□□□□□ -1.72
HERC1-211ENST00000560983 TPRG1Q6ZUI0 275 aa4.3□□□□□ -1.72
HERC1-211ENST00000560983 GET4Q7L5D6 327 aaPredicted RBP4.3□□□□□ -1.72
HERC1-211ENST00000560983 FILIP1Q7Z7B0 1213 aa4.3□□□□□ -1.72
HERC1-211ENST00000560983 ADGRE4PQ86SQ3 457 aa4.3□□□□□ -1.72
HERC1-211ENST00000560983 KBTBD6Q86V97 674 aa4.3□□□□□ -1.72
HERC1-211ENST00000560983 ZC3H7AQ8IWR0 971 aaKnown RBP4.3□□□□□ -1.72
HERC1-211ENST00000560983 CHCHD4Q8N4Q1 142 aa4.3□□□□□ -1.72
HERC1-211ENST00000560983 LSM14AQ8ND56 463 aaKnown RBP4.3□□□□□ -1.72
HERC1-211ENST00000560983 DEFB124Q8NES8 71 aa4.3□□□□□ -1.72
HERC1-211ENST00000560983 SLC7A14Q8TBB6 771 aa4.3□□□□□ -1.72
HERC1-211ENST00000560983 SSH3Q8TE77 659 aa4.3□□□□□ -1.72
HERC1-211ENST00000560983 FOXRED1Q96CU9 486 aaPredicted RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms