RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 CRY2Q49AN0 593 aa17.07■□□□□ 0.32
TPM1-228ENST00000560975 MAVSQ7Z434 540 aa17.07■□□□□ 0.32
TPM1-228ENST00000560975 KBTBD6Q86V97 674 aa17.07■□□□□ 0.32
TPM1-228ENST00000560975 OR5B17Q8NGF7 314 aa17.07■□□□□ 0.32
TPM1-228ENST00000560975 ZBTB45Q96K62 511 aaPredicted RBP17.07■□□□□ 0.32
TPM1-228ENST00000560975 BTBD7Q9P203 1132 aa17.07■□□□□ 0.32
TPM1-228ENST00000560975 ITGA11Q9UKX5 1188 aa17.07■□□□□ 0.32
TPM1-228ENST00000560975 DMTF1Q9Y222 760 aa17.07■□□□□ 0.32
TPM1-228ENST00000560975 CASQ2O14958 399 aaPredicted RBP17.07■□□□□ 0.32
TPM1-228ENST00000560975 DCXO43602 365 aa17.07■□□□□ 0.32
TPM1-228ENST00000560975 KRT38O76015 456 aa17.07■□□□□ 0.32
TPM1-228ENST00000560975 MYCLP12524 364 aaPredicted RBP17.07■□□□□ 0.32
TPM1-228ENST00000560975 ROR1Q01973 937 aa17.07■□□□□ 0.32
TPM1-228ENST00000560975 KCNJ11Q14654 390 aa17.07■□□□□ 0.32
TPM1-228ENST00000560975 PPP6R3Q5H9R7 873 aaPredicted RBP17.07■□□□□ 0.32
TPM1-228ENST00000560975 AMIGO2Q86SJ2 522 aa17.07■□□□□ 0.32
TPM1-228ENST00000560975 LZICQ8WZA0 190 aa17.07■□□□□ 0.32
TPM1-228ENST00000560975 CEP170P1Q96L14 293 aa17.07■□□□□ 0.32
TPM1-228ENST00000560975 MRPS26Q9BYN8 205 aaKnown RBP17.07■□□□□ 0.32
TPM1-228ENST00000560975 Q9H521 79 aa17.07■□□□□ 0.32
TPM1-228ENST00000560975 DBNDD1Q9H9R9 158 aa17.07■□□□□ 0.32
TPM1-228ENST00000560975 ARHGEF38Q9NXL2 777 aa17.07■□□□□ 0.32
TPM1-228ENST00000560975 NFIBO00712 420 aa17.06■□□□□ 0.32
TPM1-228ENST00000560975 SERPINB8P50452 374 aa17.06■□□□□ 0.32
TPM1-228ENST00000560975 PPIDQ08752 370 aaKnown RBP17.06■□□□□ 0.32
TPM1-228ENST00000560975 TEDDM1Q5T9Z0 273 aa17.06■□□□□ 0.32
TPM1-228ENST00000560975 LRRC8BQ6P9F7 803 aa17.06■□□□□ 0.32
TPM1-228ENST00000560975 ATG14Q6ZNE5 492 aa17.06■□□□□ 0.32
TPM1-228ENST00000560975 TAS1R3Q7RTX0 852 aa17.06■□□□□ 0.32
TPM1-228ENST00000560975 LRGUKQ96M69 825 aa17.06■□□□□ 0.32
TPM1-228ENST00000560975 PLAC1Q9HBJ0 212 aa17.06■□□□□ 0.32
TPM1-228ENST00000560975 MAN1C1Q9NR34 630 aa17.06■□□□□ 0.32
TPM1-228ENST00000560975 SORCS3Q9UPU3 1222 aa17.06■□□□□ 0.32
TPM1-228ENST00000560975 TELO2Q9Y4R8 837 aa17.06■□□□□ 0.32
TPM1-228ENST00000560975 E2F8A0AVK6 867 aa17.06■□□□□ 0.32
TPM1-228ENST00000560975 HMX2A2RU54 273 aa17.06■□□□□ 0.32
TPM1-228ENST00000560975 DENRO43583 198 aaKnown RBP17.06■□□□□ 0.32
TPM1-228ENST00000560975 EXTL3O43909 919 aa17.06■□□□□ 0.32
TPM1-228ENST00000560975 SPAG6O75602 509 aa17.06■□□□□ 0.32
TPM1-228ENST00000560975 TRMUO75648 421 aaKnown RBP17.06■□□□□ 0.32
TPM1-228ENST00000560975 SERPINB2P05120 415 aa17.06■□□□□ 0.32
TPM1-228ENST00000560975 CD1EP15812 388 aa17.06■□□□□ 0.32
TPM1-228ENST00000560975 EIF2AK2P19525 551 aaKnown RBP17.06■□□□□ 0.32
TPM1-228ENST00000560975 IDH3AP50213 366 aa17.06■□□□□ 0.32
TPM1-228ENST00000560975 HDAC4P56524 1084 aa17.06■□□□□ 0.32
TPM1-228ENST00000560975 MRPS22P82650 360 aaKnown RBP17.06■□□□□ 0.32
TPM1-228ENST00000560975 PSMD6Q15008 389 aa17.06■□□□□ 0.32
TPM1-228ENST00000560975 PDK1Q15118 436 aa17.06■□□□□ 0.32
TPM1-228ENST00000560975 C4orf19Q8IY42 314 aa17.06■□□□□ 0.32
TPM1-228ENST00000560975 TMEM35BQ8NCS4 154 aa17.06■□□□□ 0.32
TPM1-228ENST00000560975 CSRNP1Q96S65 589 aa17.06■□□□□ 0.32
TPM1-228ENST00000560975 SLC17A6Q9P2U8 582 aa17.06■□□□□ 0.32
TPM1-228ENST00000560975 LOXHD1Q8IVV2 1947 aa17.05■□□□□ 0.32
TPM1-228ENST00000560975 SIPA1L1O43166 1804 aa17.05■□□□□ 0.32
TPM1-228ENST00000560975 SPDYE2BA6NHP3 402 aa17.05■□□□□ 0.32
TPM1-228ENST00000560975 PEX1O43933 1283 aa17.05■□□□□ 0.32
TPM1-228ENST00000560975 CCNE2O96020 404 aa17.05■□□□□ 0.32
TPM1-228ENST00000560975 APRTP07741 180 aa17.05■□□□□ 0.32
TPM1-228ENST00000560975 SPDYE6P0CI01 402 aa17.05■□□□□ 0.32
TPM1-228ENST00000560975 GARTP22102 1010 aa17.05■□□□□ 0.32
TPM1-228ENST00000560975 MRPS9P82933 396 aaKnown RBP17.05■□□□□ 0.32
TPM1-228ENST00000560975 SP4Q02446 784 aa17.05■□□□□ 0.32
TPM1-228ENST00000560975 CYTH1Q15438 398 aa17.05■□□□□ 0.32
TPM1-228ENST00000560975 HADHQ16836 314 aaKnown RBP17.05■□□□□ 0.32
TPM1-228ENST00000560975 SPDYE2Q495Y8 402 aa17.05■□□□□ 0.32
TPM1-228ENST00000560975 FAM196AQ6ZSG2 479 aa17.05■□□□□ 0.32
TPM1-228ENST00000560975 ZNF554Q86TJ5 538 aa17.05■□□□□ 0.32
TPM1-228ENST00000560975 WDTC1Q8N5D0 677 aa17.05■□□□□ 0.32
TPM1-228ENST00000560975 ZFRQ96KR1 1074 aaKnown RBP17.05■□□□□ 0.32
TPM1-228ENST00000560975 COPS7BQ9H9Q2 264 aaPredicted RBP17.05■□□□□ 0.32
TPM1-228ENST00000560975 POPDC2Q9HBU9 364 aa17.05■□□□□ 0.32
TPM1-228ENST00000560975 RBAKQ9NYW8 714 aaPredicted RBP17.05■□□□□ 0.32
TPM1-228ENST00000560975 ARHGAP10A1A4S6 786 aa17.05■□□□□ 0.32
TPM1-228ENST00000560975 H0YIN7 160 aa17.05■□□□□ 0.32
TPM1-228ENST00000560975 DKC1O60832 514 aaKnown RBP eCLIP17.05■□□□□ 0.32
TPM1-228ENST00000560975 TNFAIP8O95379 198 aa17.05■□□□□ 0.32
TPM1-228ENST00000560975 ITGBL1O95965 494 aaPredicted RBP17.05■□□□□ 0.32
TPM1-228ENST00000560975 KRT7P08729 469 aa17.05■□□□□ 0.32
TPM1-228ENST00000560975 KRT3P12035 628 aa17.05■□□□□ 0.32
TPM1-228ENST00000560975 OSBPP22059 807 aa17.05■□□□□ 0.32
TPM1-228ENST00000560975 HSPA1LP34931 641 aa17.05■□□□□ 0.32
TPM1-228ENST00000560975 CRHR1P34998 444 aa17.05■□□□□ 0.32
TPM1-228ENST00000560975 GMPRP36959 345 aa17.05■□□□□ 0.32
TPM1-228ENST00000560975 CC2D2BQ6DHV5 1058 aa17.05■□□□□ 0.32
TPM1-228ENST00000560975 KLHL35Q6PF15 583 aa17.05■□□□□ 0.32
TPM1-228ENST00000560975 SCARA5Q6ZMJ2 495 aa17.05■□□□□ 0.32
TPM1-228ENST00000560975 CMTM5Q96DZ9 223 aa17.05■□□□□ 0.32
TPM1-228ENST00000560975 TIMMDC1Q9NPL8 285 aa17.05■□□□□ 0.32
TPM1-228ENST00000560975 AGO2Q9UKV8 859 aaKnown RBP17.05■□□□□ 0.32
TPM1-228ENST00000560975 PSMD13Q9UNM6 376 aa17.05■□□□□ 0.32
TPM1-228ENST00000560975 APOC4-APOC2K7ER74 178 aa17.04■□□□□ 0.32
TPM1-228ENST00000560975 PPEF1O14829 653 aaPredicted RBP17.04■□□□□ 0.32
TPM1-228ENST00000560975 LYPLA2O95372 231 aa17.04■□□□□ 0.32
TPM1-228ENST00000560975 APOC2P02655 101 aa17.04■□□□□ 0.32
TPM1-228ENST00000560975 L1CAMP32004 1257 aa17.04■□□□□ 0.32
TPM1-228ENST00000560975 CDK18Q07002 472 aa17.04■□□□□ 0.32
TPM1-228ENST00000560975 CBX3Q13185 183 aa17.04■□□□□ 0.32
TPM1-228ENST00000560975 ZDHHC15Q96MV8 337 aa17.04■□□□□ 0.32
TPM1-228ENST00000560975 TDRD3Q9H7E2 651 aaKnown RBP17.04■□□□□ 0.32
TPM1-228ENST00000560975 NRDE2Q9H7Z3 1164 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms