RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 UGT1A10Q9HAW8 530 aa15.16■□□□□ 0.02
CRTC3-210ENST00000560927 UGT1A8Q9HAW9 530 aa15.16■□□□□ 0.02
CRTC3-210ENST00000560927 SMYD2Q9NRG4 433 aa15.16■□□□□ 0.02
CRTC3-210ENST00000560927 MTMR10Q9NXD2 777 aa15.16■□□□□ 0.02
CRTC3-210ENST00000560927 KLK14Q9P0G3 267 aa15.16■□□□□ 0.02
CRTC3-210ENST00000560927 DERAQ9Y315 318 aa15.16■□□□□ 0.02
CRTC3-210ENST00000560927 MFHAS1Q9Y4C4 1052 aa15.16■□□□□ 0.02
CRTC3-210ENST00000560927 CFAP69A5D8W1 941 aa15.16■□□□□ 0.02
CRTC3-210ENST00000560927 ECM2O94769 699 aaPredicted RBP15.16■□□□□ 0.02
CRTC3-210ENST00000560927 DHRS4L1P0CG22 281 aa15.16■□□□□ 0.02
CRTC3-210ENST00000560927 HOXD8P13378 290 aaPredicted RBP15.16■□□□□ 0.02
CRTC3-210ENST00000560927 SLC18A2Q05940 514 aa15.16■□□□□ 0.02
CRTC3-210ENST00000560927 DGKDQ16760 1214 aa15.16■□□□□ 0.02
CRTC3-210ENST00000560927 TAF1BQ53T94 588 aaPredicted RBP15.16■□□□□ 0.02
CRTC3-210ENST00000560927 ARHGAP17Q68EM7 881 aa15.16■□□□□ 0.02
CRTC3-210ENST00000560927 ALKAL1Q6UXT8 129 aa15.16■□□□□ 0.02
CRTC3-210ENST00000560927 ZNF534Q76KX8 674 aa15.16■□□□□ 0.02
CRTC3-210ENST00000560927 CCDC185Q8N715 623 aa15.16■□□□□ 0.02
CRTC3-210ENST00000560927 LRRC52Q8N7C0 313 aa15.16■□□□□ 0.02
CRTC3-210ENST00000560927 ZC3H15Q8WU90 426 aaKnown RBP15.16■□□□□ 0.02
CRTC3-210ENST00000560927 TTC17Q96AE7 1141 aa15.16■□□□□ 0.02
CRTC3-210ENST00000560927 LRMDAQ9H2I8 198 aa15.16■□□□□ 0.02
CRTC3-210ENST00000560927 ZNF408Q9H9D4 720 aa15.16■□□□□ 0.02
CRTC3-210ENST00000560927 PNPLA8Q9NP80 782 aa15.16■□□□□ 0.02
CRTC3-210ENST00000560927 KAT6AQ92794 2004 aa15.15■□□□□ 0.02
CRTC3-210ENST00000560927 SLC15A5A6NIM6 579 aa15.15■□□□□ 0.02
CRTC3-210ENST00000560927 TRIM49D1C9J1S8 452 aa15.15■□□□□ 0.02
CRTC3-210ENST00000560927 C2CD2LO14523 706 aa15.15■□□□□ 0.02
CRTC3-210ENST00000560927 SPAG6O75602 509 aa15.15■□□□□ 0.02
CRTC3-210ENST00000560927 GRIA1P42261 906 aa15.15■□□□□ 0.02
CRTC3-210ENST00000560927 DPYSL2Q16555 572 aa15.15■□□□□ 0.02
CRTC3-210ENST00000560927 FYB2Q5VWT5 728 aa15.15■□□□□ 0.02
CRTC3-210ENST00000560927 GPR142Q7Z601 462 aa15.15■□□□□ 0.02
CRTC3-210ENST00000560927 CCDC91Q7Z6B0 441 aa15.15■□□□□ 0.02
CRTC3-210ENST00000560927 ZNF467Q7Z7K2 595 aaPredicted RBP15.15■□□□□ 0.02
CRTC3-210ENST00000560927 MTDHQ86UE4 582 aaKnown RBP15.15■□□□□ 0.02
CRTC3-210ENST00000560927 SLC26A11Q86WA9 606 aa15.15■□□□□ 0.02
CRTC3-210ENST00000560927 PYROXD2Q8N2H3 581 aa15.15■□□□□ 0.02
CRTC3-210ENST00000560927 MPP5Q8N3R9 675 aa15.15■□□□□ 0.02
CRTC3-210ENST00000560927 STK32AQ8WU08 396 aa15.15■□□□□ 0.02
CRTC3-210ENST00000560927 SLC7A6OSQ96CW6 309 aaPredicted RBP15.15■□□□□ 0.02
CRTC3-210ENST00000560927 MS4A4AQ96JQ5 239 aa15.15■□□□□ 0.02
CRTC3-210ENST00000560927 GCOM2Q9BZD3 368 aaPredicted RBP15.15■□□□□ 0.02
CRTC3-210ENST00000560927 GOLGA2P5Q9HBQ8 144 aa15.15■□□□□ 0.02
CRTC3-210ENST00000560927 AP4E1Q9UPM8 1137 aa15.15■□□□□ 0.02
CRTC3-210ENST00000560927 EZRP15311 586 aaKnown RBP15.15■□□□□ 0.02
CRTC3-210ENST00000560927 YBX3P16989 372 aaKnown RBP eCLIP15.15■□□□□ 0.023e-7■■□□□ 12.8
CRTC3-210ENST00000560927 MAGEA6P43360 314 aa15.15■□□□□ 0.02
CRTC3-210ENST00000560927 PTPN9P43378 593 aa15.15■□□□□ 0.02
CRTC3-210ENST00000560927 HIC1Q14526 733 aa15.15■□□□□ 0.02
CRTC3-210ENST00000560927 NOTUMQ6P988 496 aa15.15■□□□□ 0.02
CRTC3-210ENST00000560927 UNC93AQ86WB7 457 aa15.15■□□□□ 0.02
CRTC3-210ENST00000560927 TMEM40Q8WWA1 233 aa15.15■□□□□ 0.02
CRTC3-210ENST00000560927 NDRG1Q92597 394 aaKnown RBP15.15■□□□□ 0.02
CRTC3-210ENST00000560927 CENPIQ92674 756 aaPredicted RBP15.15■□□□□ 0.02
CRTC3-210ENST00000560927 L3MBTL3Q96JM7 780 aaPredicted RBP15.15■□□□□ 0.02
CRTC3-210ENST00000560927 KCTD15Q96SI1 283 aaPredicted RBP15.15■□□□□ 0.02
CRTC3-210ENST00000560927 CNTN3Q9P232 1028 aa15.15■□□□□ 0.02
CRTC3-210ENST00000560927 MCM8Q9UJA3 840 aa15.15■□□□□ 0.02
CRTC3-210ENST00000560927 A6NJR5 290 aa15.14■□□□□ 0.01
CRTC3-210ENST00000560927 F5H423 210 aaPredicted RBP15.14■□□□□ 0.01
CRTC3-210ENST00000560927 STRNO43815 780 aa15.14■□□□□ 0.01
CRTC3-210ENST00000560927 BGNP21810 368 aa15.14■□□□□ 0.01
CRTC3-210ENST00000560927 BST2Q10589 180 aaKnown RBP15.14■□□□□ 0.01
CRTC3-210ENST00000560927 CBLBQ13191 982 aa15.14■□□□□ 0.01
CRTC3-210ENST00000560927 BMPR2Q13873 1038 aa15.14■□□□□ 0.01
CRTC3-210ENST00000560927 FBXO47Q5MNV8 452 aa15.14■□□□□ 0.01
CRTC3-210ENST00000560927 TRMT10BQ6PF06 316 aaKnown RBP15.14■□□□□ 0.01
CRTC3-210ENST00000560927 UNC5AQ6ZN44 842 aa15.14■□□□□ 0.01
CRTC3-210ENST00000560927 SLC26A9Q7LBE3 791 aa15.14■□□□□ 0.01
CRTC3-210ENST00000560927 ZDHHC17Q8IUH5 632 aa15.14■□□□□ 0.01
CRTC3-210ENST00000560927 ANKRD52Q8NB46 1076 aa15.14■□□□□ 0.01
CRTC3-210ENST00000560927 NETO2Q8NC67 525 aa15.14■□□□□ 0.01
CRTC3-210ENST00000560927 GTF3C2Q8WUA4 911 aaPredicted RBP15.14■□□□□ 0.01
CRTC3-210ENST00000560927 CSPG4P5Q96PW8 444 aa15.14■□□□□ 0.01
CRTC3-210ENST00000560927 TSSK1BQ9BXA7 367 aa15.14■□□□□ 0.01
CRTC3-210ENST00000560927 TRIM6Q9C030 488 aaPredicted RBP15.14■□□□□ 0.01
CRTC3-210ENST00000560927 RNF39Q9H2S5 420 aa15.14■□□□□ 0.01
CRTC3-210ENST00000560927 CCL15-CCL14A0A0B4J2E2 113 aa15.14■□□□□ 0.01
CRTC3-210ENST00000560927 A0A0G2JND7 137 aa15.14■□□□□ 0.01
CRTC3-210ENST00000560927 SMIM10L2AP0DMW4 78 aa15.14■□□□□ 0.01
CRTC3-210ENST00000560927 SMIM10L2BP0DMW5 78 aa15.14■□□□□ 0.01
CRTC3-210ENST00000560927 TROVE2P10155 538 aaKnown RBP eCLIP15.14■□□□□ 0.01
CRTC3-210ENST00000560927 GNL1P36915 607 aaPredicted RBP15.14■□□□□ 0.01
CRTC3-210ENST00000560927 CCL15Q16663 113 aa15.14■□□□□ 0.01
CRTC3-210ENST00000560927 SLC45A4Q5BKX6 768 aa15.14■□□□□ 0.01
CRTC3-210ENST00000560927 TTC39BQ5VTQ0 682 aaPredicted RBP15.14■□□□□ 0.01
CRTC3-210ENST00000560927 KCNT2Q6UVM3 1135 aa15.14■□□□□ 0.01
CRTC3-210ENST00000560927 CDKL3Q8IVW4 592 aaPredicted RBP15.14■□□□□ 0.01
CRTC3-210ENST00000560927 SLC2A14Q8TDB8 520 aa15.14■□□□□ 0.01
CRTC3-210ENST00000560927 BRI3BPQ8WY22 251 aa15.14■□□□□ 0.01
CRTC3-210ENST00000560927 SRPK1Q96SB4 655 aaKnown RBP15.14■□□□□ 0.01
CRTC3-210ENST00000560927 TINF2Q9BSI4 451 aa15.14■□□□□ 0.01
CRTC3-210ENST00000560927 ZFP69BQ9UJL9 534 aa15.14■□□□□ 0.01
CRTC3-210ENST00000560927 SMIM28A0A1B0GU29 152 aa15.13■□□□□ 0.01
CRTC3-210ENST00000560927 PIRO00625 290 aa15.13■□□□□ 0.01
CRTC3-210ENST00000560927 CSH1P0DML2 217 aa15.13■□□□□ 0.01
CRTC3-210ENST00000560927 CSH2P0DML3 217 aa15.13■□□□□ 0.01
CRTC3-210ENST00000560927 DARSP14868 501 aaKnown RBP15.13■□□□□ 0.01
CRTC3-210ENST00000560927 AMPD1P23109 780 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms