RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 SFMBT1Q9UHJ3 866 aa16.23■□□□□ 0.19
LYSMD2-204ENST00000560491 FBXL21Q9UKT6 434 aa16.23■□□□□ 0.19
LYSMD2-204ENST00000560491 NAALADL1Q9UQQ1 740 aa16.23■□□□□ 0.19
LYSMD2-204ENST00000560491 TECTAO75443 2155 aa16.22■□□□□ 0.19
LYSMD2-204ENST00000560491 SLC12A8A0AV02 714 aa16.22■□□□□ 0.19
LYSMD2-204ENST00000560491 MSI1O43347 362 aaKnown RBP16.22■□□□□ 0.19
LYSMD2-204ENST00000560491 PLEKP08567 350 aaPredicted RBP16.22■□□□□ 0.19
LYSMD2-204ENST00000560491 NCAM1P13591 858 aa16.22■□□□□ 0.19
LYSMD2-204ENST00000560491 ARSAP15289 507 aa16.22■□□□□ 0.19
LYSMD2-204ENST00000560491 TNFAIP3P21580 790 aa16.22■□□□□ 0.19
LYSMD2-204ENST00000560491 MMP8P22894 467 aa16.22■□□□□ 0.19
LYSMD2-204ENST00000560491 GABRB2P47870 512 aa16.22■□□□□ 0.19
LYSMD2-204ENST00000560491 SNX16P57768 344 aa16.22■□□□□ 0.19
LYSMD2-204ENST00000560491 SLC6A3Q01959 620 aa16.22■□□□□ 0.19
LYSMD2-204ENST00000560491 CENPCQ03188 943 aa16.22■□□□□ 0.19
LYSMD2-204ENST00000560491 SIGLEC14Q08ET2 396 aa16.22■□□□□ 0.19
LYSMD2-204ENST00000560491 TRIM14Q14142 442 aa16.22■□□□□ 0.19
LYSMD2-204ENST00000560491 TDRD12Q587J7 1177 aaKnown RBP16.22■□□□□ 0.19
LYSMD2-204ENST00000560491 HGSNATQ68CP4 663 aa16.22■□□□□ 0.19
LYSMD2-204ENST00000560491 CC2D1AQ6P1N0 951 aaPredicted RBP16.22■□□□□ 0.19
LYSMD2-204ENST00000560491 TRIM67Q6ZTA4 783 aa16.22■□□□□ 0.19
LYSMD2-204ENST00000560491 TOGARAM2Q6ZUX3 1019 aa16.22■□□□□ 0.19
LYSMD2-204ENST00000560491 PHLDB2Q86SQ0 1253 aa16.22■□□□□ 0.19
LYSMD2-204ENST00000560491 DDX42Q86XP3 938 aaKnown RBP eCLIP16.22■□□□□ 0.19
LYSMD2-204ENST00000560491 XYLT1Q86Y38 959 aa16.22■□□□□ 0.19
LYSMD2-204ENST00000560491 MSANTD4Q8NCY6 345 aa16.22■□□□□ 0.19
LYSMD2-204ENST00000560491 OSCP1Q8WVF1 389 aa16.22■□□□□ 0.19
LYSMD2-204ENST00000560491 SYN2Q92777 582 aaPredicted RBP16.22■□□□□ 0.19
LYSMD2-204ENST00000560491 IRF7Q92985 503 aa16.22■□□□□ 0.19
LYSMD2-204ENST00000560491 FAM83CQ9BQN1 747 aa16.22■□□□□ 0.19
LYSMD2-204ENST00000560491 C11orf70Q9BRQ4 267 aa16.22■□□□□ 0.19
LYSMD2-204ENST00000560491 NUCKS1Q9H1E3 243 aaKnown RBP16.22■□□□□ 0.19
LYSMD2-204ENST00000560491 EBF3Q9H4W6 596 aa16.22■□□□□ 0.19
LYSMD2-204ENST00000560491 HPS4Q9NQG7 708 aa16.22■□□□□ 0.19
LYSMD2-204ENST00000560491 OLA1Q9NTK5 396 aaKnown RBP16.22■□□□□ 0.19
LYSMD2-204ENST00000560491 DUS2Q9NX74 493 aaKnown RBP16.22■□□□□ 0.19
LYSMD2-204ENST00000560491 SH3BP1Q9Y3L3 701 aa16.22■□□□□ 0.19
LYSMD2-204ENST00000560491 KRBA1A5PL33 1030 aa16.21■□□□□ 0.19
LYSMD2-204ENST00000560491 GOLGA8SH3BPF8 625 aa16.21■□□□□ 0.19
LYSMD2-204ENST00000560491 NSFP46459 744 aaKnown RBP16.21■□□□□ 0.19
LYSMD2-204ENST00000560491 IFNAR2P48551 515 aa16.21■□□□□ 0.19
LYSMD2-204ENST00000560491 YWHAZP63104 245 aaKnown RBP16.21■□□□□ 0.19
LYSMD2-204ENST00000560491 PFKPQ01813 784 aa16.21■□□□□ 0.19
LYSMD2-204ENST00000560491 PTP4A2Q12974 167 aa16.21■□□□□ 0.19
LYSMD2-204ENST00000560491 SYPL2Q5VXT5 272 aa16.21■□□□□ 0.19
LYSMD2-204ENST00000560491 MSANTD2Q6P1R3 559 aa16.21■□□□□ 0.19
LYSMD2-204ENST00000560491 ADAM32Q8TC27 787 aa16.21■□□□□ 0.19
LYSMD2-204ENST00000560491 DQX1Q8TE96 717 aaKnown RBP16.21■□□□□ 0.19
LYSMD2-204ENST00000560491 DNASE1L2Q92874 299 aa16.21■□□□□ 0.19
LYSMD2-204ENST00000560491 LINC00597Q9H2U6 94 aa16.21■□□□□ 0.19
LYSMD2-204ENST00000560491 POPDC2Q9HBU9 364 aa16.21■□□□□ 0.19
LYSMD2-204ENST00000560491 HEBP1Q9NRV9 189 aa16.21■□□□□ 0.19
LYSMD2-204ENST00000560491 TAS2R14Q9NYV8 317 aa16.21■□□□□ 0.19
LYSMD2-204ENST00000560491 GTSE1Q9NYZ3 720 aa16.21■□□□□ 0.19
LYSMD2-204ENST00000560491 STRIP2Q9ULQ0 834 aa16.21■□□□□ 0.19
LYSMD2-204ENST00000560491 E2F8A0AVK6 867 aa16.2■□□□□ 0.18
LYSMD2-204ENST00000560491 FAM86C2PA6NEL3 165 aa16.2■□□□□ 0.18
LYSMD2-204ENST00000560491 TMEM221A6NGB7 291 aa16.2■□□□□ 0.18
LYSMD2-204ENST00000560491 OTOL1A6NHN0 477 aaPredicted RBP16.2■□□□□ 0.18
LYSMD2-204ENST00000560491 TMCO5BA8MYB1 307 aa16.2■□□□□ 0.18
LYSMD2-204ENST00000560491 M0R296 226 aa16.2■□□□□ 0.18
LYSMD2-204ENST00000560491 DDX3XO00571 662 aaKnown RBP eCLIP16.2■□□□□ 0.18
LYSMD2-204ENST00000560491 CAPN9O14815 690 aa16.2■□□□□ 0.18
LYSMD2-204ENST00000560491 GREM1O60565 184 aa16.2■□□□□ 0.18
LYSMD2-204ENST00000560491 HSF2BPO75031 334 aa16.2■□□□□ 0.18
LYSMD2-204ENST00000560491 STC2O76061 302 aa16.2■□□□□ 0.18
LYSMD2-204ENST00000560491 PDGFBP01127 241 aaPredicted RBP16.2■□□□□ 0.18
LYSMD2-204ENST00000560491 SERPING1P05155 500 aa16.2■□□□□ 0.18
LYSMD2-204ENST00000560491 ADKP55263 362 aaKnown RBP16.2■□□□□ 0.18
LYSMD2-204ENST00000560491 PITX1P78337 314 aaPredicted RBP16.2■□□□□ 0.18
LYSMD2-204ENST00000560491 TBX2Q13207 712 aaPredicted RBP16.2■□□□□ 0.18
LYSMD2-204ENST00000560491 EML3Q32P44 896 aa16.2■□□□□ 0.18
LYSMD2-204ENST00000560491 EFHC1Q5JVL4 640 aa16.2■□□□□ 0.18
LYSMD2-204ENST00000560491 FAM102AQ5T9C2 384 aaPredicted RBP16.2■□□□□ 0.18
LYSMD2-204ENST00000560491 SLC26A9Q7LBE3 791 aa16.2■□□□□ 0.18
LYSMD2-204ENST00000560491 TAC4Q86UU9 113 aa16.2■□□□□ 0.18
LYSMD2-204ENST00000560491 DNAAF5Q86Y56 855 aa16.2■□□□□ 0.18
LYSMD2-204ENST00000560491 PHF13Q86YI8 300 aaPredicted RBP16.2■□□□□ 0.18
LYSMD2-204ENST00000560491 ZDHHC17Q8IUH5 632 aa16.2■□□□□ 0.18
LYSMD2-204ENST00000560491 BBS7Q8IWZ6 715 aa16.2■□□□□ 0.18
LYSMD2-204ENST00000560491 DEFB106AQ8N104 65 aa16.2■□□□□ 0.18
LYSMD2-204ENST00000560491 SIX5Q8N196 739 aa16.2■□□□□ 0.18
LYSMD2-204ENST00000560491 CSGALNACT1Q8TDX6 532 aa16.2■□□□□ 0.18
LYSMD2-204ENST00000560491 MRFAP1L1Q96HT8 127 aa16.2■□□□□ 0.18
LYSMD2-204ENST00000560491 ARHGEF3Q9NR81 526 aa16.2■□□□□ 0.18
LYSMD2-204ENST00000560491 ASNSD1Q9NWL6 643 aa16.2■□□□□ 0.18
LYSMD2-204ENST00000560491 ADAM22Q9P0K1 906 aa16.2■□□□□ 0.18
LYSMD2-204ENST00000560491 WNT16Q9UBV4 365 aa16.2■□□□□ 0.18
LYSMD2-204ENST00000560491 MYOFQ9NZM1 2061 aa16.19■□□□□ 0.18
LYSMD2-204ENST00000560491 MFAP3LO75121 409 aa16.19■□□□□ 0.18
LYSMD2-204ENST00000560491 DAB1O75553 588 aa16.19■□□□□ 0.18
LYSMD2-204ENST00000560491 GJB6O95452 261 aa16.19■□□□□ 0.18
LYSMD2-204ENST00000560491 GLI1P08151 1106 aa16.19■□□□□ 0.18
LYSMD2-204ENST00000560491 TPM1P09493 284 aa16.19■□□□□ 0.18
LYSMD2-204ENST00000560491 SOX9P48436 509 aa16.19■□□□□ 0.18
LYSMD2-204ENST00000560491 RNASE9P60153 205 aaKnown RBP16.19■□□□□ 0.18
LYSMD2-204ENST00000560491 COG7P83436 770 aa16.19■□□□□ 0.18
LYSMD2-204ENST00000560491 RUNX3Q13761 415 aa16.19■□□□□ 0.18
LYSMD2-204ENST00000560491 PDGFRLQ15198 375 aa16.19■□□□□ 0.18
LYSMD2-204ENST00000560491 MLF2Q15773 248 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms