RNA–Protein interactions for RNA: ENST00000560269.1

HMBOX1-213, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-213ENST00000560269 SLC1A1P43005 524 aa14.25□□□□□ -0.13
HMBOX1-213ENST00000560269 EIF4EBP2Q13542 120 aaPredicted RBP14.25□□□□□ -0.13
HMBOX1-213ENST00000560269 OTUD1Q5VV17 481 aaPredicted RBP14.25□□□□□ -0.13
HMBOX1-213ENST00000560269 KLHDC10Q6PID8 442 aa14.25□□□□□ -0.13
HMBOX1-213ENST00000560269 SYCE2Q6PIF2 218 aa14.25□□□□□ -0.13
HMBOX1-213ENST00000560269 NYAP1Q6ZVC0 841 aa14.25□□□□□ -0.13
HMBOX1-213ENST00000560269 GAREM2Q75VX8 874 aa14.25□□□□□ -0.13
HMBOX1-213ENST00000560269 STRADAQ7RTN6 431 aa14.25□□□□□ -0.13
HMBOX1-213ENST00000560269 DAAM2Q86T65 1068 aa14.25□□□□□ -0.13
HMBOX1-213ENST00000560269 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.25□□□□□ -0.13
HMBOX1-213ENST00000560269 DQX1Q8TE96 717 aaKnown RBP14.25□□□□□ -0.13
HMBOX1-213ENST00000560269 RNF139Q8WU17 664 aa14.25□□□□□ -0.13
HMBOX1-213ENST00000560269 UBE2Q2Q8WVN8 375 aa14.25□□□□□ -0.13
HMBOX1-213ENST00000560269 SMG7Q92540 1137 aaKnown RBP14.25□□□□□ -0.13
HMBOX1-213ENST00000560269 ALS2CR12Q96Q35 445 aa14.25□□□□□ -0.13
HMBOX1-213ENST00000560269 CDK5RAP1Q96SZ6 601 aaKnown RBP14.25□□□□□ -0.13
HMBOX1-213ENST00000560269 TBCBQ99426 244 aa14.25□□□□□ -0.13
HMBOX1-213ENST00000560269 NCAPGQ9BPX3 1015 aa14.25□□□□□ -0.13
HMBOX1-213ENST00000560269 ADAM33Q9BZ11 813 aa14.25□□□□□ -0.13
HMBOX1-213ENST00000560269 SMOC2Q9H3U7 446 aa14.25□□□□□ -0.13
HMBOX1-213ENST00000560269 CLEC1BQ9P126 229 aa14.25□□□□□ -0.13
HMBOX1-213ENST00000560269 ALG6Q9Y672 507 aa14.25□□□□□ -0.13
HMBOX1-213ENST00000560269 C2orf16Q68DN1 1984 aa14.25□□□□□ -0.13
HMBOX1-213ENST00000560269 TMEM110-MUSTN1A8MSY1 372 aa14.24□□□□□ -0.13
HMBOX1-213ENST00000560269 ESPNB1AK53 854 aa14.24□□□□□ -0.13
HMBOX1-213ENST00000560269 TLR5O60602 858 aa14.24□□□□□ -0.13
HMBOX1-213ENST00000560269 MOSPD3O75425 235 aa14.24□□□□□ -0.13
HMBOX1-213ENST00000560269 OAS1P00973 400 aaKnown RBP14.24□□□□□ -0.13
HMBOX1-213ENST00000560269 MYL4P12829 197 aa14.24□□□□□ -0.13
HMBOX1-213ENST00000560269 DESP17661 470 aa14.24□□□□□ -0.13
HMBOX1-213ENST00000560269 TFE3P19532 575 aaPredicted RBP14.24□□□□□ -0.13
HMBOX1-213ENST00000560269 COMTP21964 271 aa14.24□□□□□ -0.13
HMBOX1-213ENST00000560269 SULT1E1P49888 294 aa14.24□□□□□ -0.13
HMBOX1-213ENST00000560269 PITX1P78337 314 aaPredicted RBP14.24□□□□□ -0.13
HMBOX1-213ENST00000560269 C15orf59Q2T9L4 293 aaPredicted RBP14.24□□□□□ -0.13
HMBOX1-213ENST00000560269 PRSS36Q5K4E3 855 aa14.24□□□□□ -0.13
HMBOX1-213ENST00000560269 ZNF569Q5MCW4 686 aa14.24□□□□□ -0.13
HMBOX1-213ENST00000560269 RARS2Q5T160 578 aaKnown RBP14.24□□□□□ -0.13
HMBOX1-213ENST00000560269 HECTD3Q5T447 861 aa14.24□□□□□ -0.13
HMBOX1-213ENST00000560269 SH3PXD2AQ5TCZ1 1133 aa14.24□□□□□ -0.13
HMBOX1-213ENST00000560269 TMC5Q6UXY8 1006 aa14.24□□□□□ -0.13
HMBOX1-213ENST00000560269 PDZD4Q76G19 769 aaPredicted RBP14.24□□□□□ -0.13
HMBOX1-213ENST00000560269 GRASPQ7Z6J2 395 aaPredicted RBP14.24□□□□□ -0.13
HMBOX1-213ENST00000560269 GPR149Q86SP6 731 aa14.24□□□□□ -0.13
HMBOX1-213ENST00000560269 TADA2BQ86TJ2 420 aa14.24□□□□□ -0.13
HMBOX1-213ENST00000560269 ARFGAP1Q8N6T3 406 aa14.24□□□□□ -0.13
HMBOX1-213ENST00000560269 FAM172AQ8WUF8 416 aa14.24□□□□□ -0.13
HMBOX1-213ENST00000560269 PABPC5Q96DU9 382 aaKnown RBP14.24□□□□□ -0.13
HMBOX1-213ENST00000560269 GCNAQ96QF7 691 aa14.24□□□□□ -0.13
HMBOX1-213ENST00000560269 CCSER2Q9H7U1 834 aa14.24□□□□□ -0.13
HMBOX1-213ENST00000560269 TMEM51Q9NW97 253 aa14.24□□□□□ -0.13
HMBOX1-213ENST00000560269 A0A1W2PRU2 124 aa14.23□□□□□ -0.13
HMBOX1-213ENST00000560269 SOBPA7XYQ1 873 aa14.23□□□□□ -0.13
HMBOX1-213ENST00000560269 M0QYT0 321 aa14.23□□□□□ -0.13
HMBOX1-213ENST00000560269 ZNF197O14709 1029 aa14.23□□□□□ -0.13
HMBOX1-213ENST00000560269 ZNF500O60304 480 aaPredicted RBP14.23□□□□□ -0.13
HMBOX1-213ENST00000560269 TBX10O75333 385 aa14.23□□□□□ -0.13
HMBOX1-213ENST00000560269 LRCH4O75427 683 aa14.23□□□□□ -0.13
HMBOX1-213ENST00000560269 RNF8O76064 485 aa14.23□□□□□ -0.13
HMBOX1-213ENST00000560269 OLFM2O95897 454 aa14.23□□□□□ -0.13
HMBOX1-213ENST00000560269 TRUB2O95900 331 aaKnown RBP14.23□□□□□ -0.13
HMBOX1-213ENST00000560269 F9P00740 461 aa14.23□□□□□ -0.13
HMBOX1-213ENST00000560269 PFKLP17858 780 aa14.23□□□□□ -0.13
HMBOX1-213ENST00000560269 PCK1P35558 622 aa14.23□□□□□ -0.13
HMBOX1-213ENST00000560269 LTBRP36941 435 aa14.23□□□□□ -0.13
HMBOX1-213ENST00000560269 CCR2P41597 374 aa14.23□□□□□ -0.13
HMBOX1-213ENST00000560269 ATP11AP98196 1134 aa14.23□□□□□ -0.13
HMBOX1-213ENST00000560269 ITIH3Q06033 890 aa14.23□□□□□ -0.13
HMBOX1-213ENST00000560269 CC2D1AQ6P1N0 951 aaPredicted RBP14.23□□□□□ -0.13
HMBOX1-213ENST00000560269 Q7L0L9 218 aa14.23□□□□□ -0.13
HMBOX1-213ENST00000560269 RSRC2Q7L4I2 434 aaKnown RBP14.23□□□□□ -0.13
HMBOX1-213ENST00000560269 TAC4Q86UU9 113 aa14.23□□□□□ -0.13
HMBOX1-213ENST00000560269 NT5DC3Q86UY8 548 aa14.23□□□□□ -0.13
HMBOX1-213ENST00000560269 CPNE8Q86YQ8 564 aa14.23□□□□□ -0.13
HMBOX1-213ENST00000560269 SLC35F6Q8N357 371 aa14.23□□□□□ -0.13
HMBOX1-213ENST00000560269 SHKBP1Q8TBC3 707 aa14.23□□□□□ -0.13
HMBOX1-213ENST00000560269 MYLIPQ8WY64 445 aa14.23□□□□□ -0.13
HMBOX1-213ENST00000560269 MRPS31Q92665 395 aaKnown RBP14.23□□□□□ -0.13
HMBOX1-213ENST00000560269 SERPINB11Q96P15 392 aa14.23□□□□□ -0.13
HMBOX1-213ENST00000560269 CDX2Q99626 313 aaPredicted RBP14.23□□□□□ -0.13
HMBOX1-213ENST00000560269 S1PR5Q9H228 398 aa14.23□□□□□ -0.13
HMBOX1-213ENST00000560269 ADAM7Q9H2U9 754 aa14.23□□□□□ -0.13
HMBOX1-213ENST00000560269 ATXN3LQ9H3M9 355 aa14.23□□□□□ -0.13
HMBOX1-213ENST00000560269 GOLPH3Q9H4A6 298 aa14.23□□□□□ -0.13
HMBOX1-213ENST00000560269 PIDD1Q9HB75 910 aa14.23□□□□□ -0.13
HMBOX1-213ENST00000560269 CLDND1Q9NY35 253 aa14.23□□□□□ -0.13
HMBOX1-213ENST00000560269 CALCOCO1Q9P1Z2 691 aa14.23□□□□□ -0.13
HMBOX1-213ENST00000560269 NUDT5Q9UKK9 219 aa14.23□□□□□ -0.13
HMBOX1-213ENST00000560269 DOCK6Q96HP0 2047 aa14.23□□□□□ -0.13
HMBOX1-213ENST00000560269 CLUHO75153 1309 aa14.22□□□□□ -0.13
HMBOX1-213ENST00000560269 C2orf78A6NCI8 922 aa14.22□□□□□ -0.13
HMBOX1-213ENST00000560269 NRG2O14511 850 aaPredicted RBP14.22□□□□□ -0.13
HMBOX1-213ENST00000560269 IRAK2O43187 625 aa14.22□□□□□ -0.13
HMBOX1-213ENST00000560269 COCHO43405 550 aa14.22□□□□□ -0.13
HMBOX1-213ENST00000560269 TBX18O95935 607 aa14.22□□□□□ -0.13
HMBOX1-213ENST00000560269 TUBB4AP04350 444 aa14.22□□□□□ -0.13
HMBOX1-213ENST00000560269 DDX6P26196 483 aaKnown RBP eCLIP14.22□□□□□ -0.13
HMBOX1-213ENST00000560269 GBP1P32455 592 aa14.22□□□□□ -0.13
HMBOX1-213ENST00000560269 RDXP35241 583 aaKnown RBP14.22□□□□□ -0.13
HMBOX1-213ENST00000560269 ATP5C1P36542 298 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms