RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 HLA-EP13747 358 aa13.57□□□□□ -0.24
RABGGTA-213ENST00000560127 PTPN1P18031 435 aaKnown RBP13.57□□□□□ -0.24
RABGGTA-213ENST00000560127 DDIT3P35638 169 aa13.57□□□□□ -0.24
RABGGTA-213ENST00000560127 CSNK1EP49674 416 aaKnown RBP13.57□□□□□ -0.24
RABGGTA-213ENST00000560127 PGFP49763 221 aa13.57□□□□□ -0.24
RABGGTA-213ENST00000560127 SUZ12Q15022 739 aaKnown RBP13.57□□□□□ -0.24
RABGGTA-213ENST00000560127 MCTP1Q6DN14 999 aa13.57□□□□□ -0.24
RABGGTA-213ENST00000560127 TPGS1Q6ZTW0 290 aa13.57□□□□□ -0.24
RABGGTA-213ENST00000560127 KRI1Q8N9T8 703 aaKnown RBP13.57□□□□□ -0.24
RABGGTA-213ENST00000560127 LARP4BQ92615 738 aaKnown RBP13.57□□□□□ -0.24
RABGGTA-213ENST00000560127 P2RY11Q96G91 374 aa13.57□□□□□ -0.24
RABGGTA-213ENST00000560127 ANKRD36BP1Q96IX9 119 aa13.57□□□□□ -0.24
RABGGTA-213ENST00000560127 FCRL3Q96P31 734 aaPredicted RBP13.57□□□□□ -0.24
RABGGTA-213ENST00000560127 ACCSQ96QU6 501 aa13.57□□□□□ -0.24
RABGGTA-213ENST00000560127 KCNK16Q96T55 309 aa13.57□□□□□ -0.24
RABGGTA-213ENST00000560127 MMS19Q96T76 1030 aa13.57□□□□□ -0.24
RABGGTA-213ENST00000560127 SNX25Q9H3E2 840 aa13.57□□□□□ -0.24
RABGGTA-213ENST00000560127 PCIF1Q9H4Z3 704 aa13.57□□□□□ -0.24
RABGGTA-213ENST00000560127 MRPL44Q9H9J2 332 aaKnown RBP13.57□□□□□ -0.24
RABGGTA-213ENST00000560127 IL37Q9NZH6 218 aa13.57□□□□□ -0.24
RABGGTA-213ENST00000560127 TBC1D7Q9P0N9 293 aa13.57□□□□□ -0.24
RABGGTA-213ENST00000560127 GMIPQ9P107 970 aa13.57□□□□□ -0.24
RABGGTA-213ENST00000560127 WDR35Q9P2L0 1181 aa13.57□□□□□ -0.24
RABGGTA-213ENST00000560127 EXOC7Q9UPT5 735 aa13.57□□□□□ -0.24
RABGGTA-213ENST00000560127 R3HCC1Q9Y3T6 440 aaKnown RBP13.57□□□□□ -0.24
RABGGTA-213ENST00000560127 SNX11Q9Y5W9 270 aa13.57□□□□□ -0.24
RABGGTA-213ENST00000560127 IGLV3-19P01714 112 aa13.56□□□□□ -0.24
RABGGTA-213ENST00000560127 OXTRP30559 389 aa13.56□□□□□ -0.24
RABGGTA-213ENST00000560127 DGKGP49619 791 aa13.56□□□□□ -0.24
RABGGTA-213ENST00000560127 CASP5P51878 434 aa13.56□□□□□ -0.24
RABGGTA-213ENST00000560127 GRIN1Q05586 938 aa13.56□□□□□ -0.24
RABGGTA-213ENST00000560127 STARD3Q14849 445 aa13.56□□□□□ -0.24
RABGGTA-213ENST00000560127 PCSK4Q6UW60 755 aa13.56□□□□□ -0.24
RABGGTA-213ENST00000560127 HTR3DQ70Z44 454 aa13.56□□□□□ -0.24
RABGGTA-213ENST00000560127 DYMQ7RTS9 669 aa13.56□□□□□ -0.24
RABGGTA-213ENST00000560127 TMPRSS12Q86WS5 348 aa13.56□□□□□ -0.24
RABGGTA-213ENST00000560127 TMPRSS6Q8IU80 811 aa13.56□□□□□ -0.24
RABGGTA-213ENST00000560127 OR6B3Q8NGW1 331 aa13.56□□□□□ -0.24
RABGGTA-213ENST00000560127 NOC3LQ8WTT2 800 aaKnown RBP13.56□□□□□ -0.24
RABGGTA-213ENST00000560127 NXPE2Q96DL1 559 aa13.56□□□□□ -0.24
RABGGTA-213ENST00000560127 FAM92AA1XBS5 289 aa13.55□□□□□ -0.24
RABGGTA-213ENST00000560127 J3QKU1 62 aa13.55□□□□□ -0.24
RABGGTA-213ENST00000560127 KCNK3O14649 394 aa13.55□□□□□ -0.24
RABGGTA-213ENST00000560127 TACC1O75410 805 aa13.55□□□□□ -0.24
RABGGTA-213ENST00000560127 TBX18O95935 607 aa13.55□□□□□ -0.24
RABGGTA-213ENST00000560127 TNNC2P02585 160 aa13.55□□□□□ -0.24
RABGGTA-213ENST00000560127 IL12RB1P42701 662 aa13.55□□□□□ -0.24
RABGGTA-213ENST00000560127 GRK6P43250 576 aa13.55□□□□□ -0.24
RABGGTA-213ENST00000560127 AFF3P51826 1226 aaKnown RBP13.55□□□□□ -0.24
RABGGTA-213ENST00000560127 SLC5A3P53794 718 aa13.55□□□□□ -0.24
RABGGTA-213ENST00000560127 ENPP2Q13822 863 aa13.55□□□□□ -0.24
RABGGTA-213ENST00000560127 RABEP1Q15276 862 aa13.55□□□□□ -0.24
RABGGTA-213ENST00000560127 DUOXA2Q1HG44 320 aa13.55□□□□□ -0.24
RABGGTA-213ENST00000560127 LRRC69Q6ZNQ3 347 aa13.55□□□□□ -0.24
RABGGTA-213ENST00000560127 RASSF8Q8NHQ8 419 aa13.55□□□□□ -0.24
RABGGTA-213ENST00000560127 SIPA1Q96FS4 1042 aa13.55□□□□□ -0.24
RABGGTA-213ENST00000560127 NUP58Q9BVL2 599 aa13.55□□□□□ -0.24
RABGGTA-213ENST00000560127 KLF16Q9BXK1 252 aaPredicted RBP13.55□□□□□ -0.24
RABGGTA-213ENST00000560127 FGFBP2Q9BYJ0 223 aa13.55□□□□□ -0.24
RABGGTA-213ENST00000560127 THAP10Q9P2Z0 257 aaPredicted RBP13.55□□□□□ -0.24
RABGGTA-213ENST00000560127 SEL1LQ9UBV2 794 aa13.55□□□□□ -0.24
RABGGTA-213ENST00000560127 FBXO10Q9UK96 956 aa13.55□□□□□ -0.24
RABGGTA-213ENST00000560127 DOCK9Q9BZ29 2069 aa13.55□□□□□ -0.24
RABGGTA-213ENST00000560127 DOPEY2Q9Y3R5 2298 aa13.54□□□□□ -0.24
RABGGTA-213ENST00000560127 PCDHGA12O60330 932 aa13.54□□□□□ -0.24
RABGGTA-213ENST00000560127 GCNT3O95395 438 aa13.54□□□□□ -0.24
RABGGTA-213ENST00000560127 CST3P01034 146 aaPredicted RBP13.54□□□□□ -0.24
RABGGTA-213ENST00000560127 CLDN6P56747 220 aa13.54□□□□□ -0.24
RABGGTA-213ENST00000560127 SEMG2Q02383 582 aa13.54□□□□□ -0.24
RABGGTA-213ENST00000560127 PAQR9Q6ZVX9 377 aa13.54□□□□□ -0.24
RABGGTA-213ENST00000560127 SYCP3Q8IZU3 236 aa13.54□□□□□ -0.24
RABGGTA-213ENST00000560127 GPD1LQ8N335 351 aa13.54□□□□□ -0.24
RABGGTA-213ENST00000560127 B3GALNT2Q8NCR0 500 aa13.54□□□□□ -0.24
RABGGTA-213ENST00000560127 BHMTQ93088 406 aa13.54□□□□□ -0.24
RABGGTA-213ENST00000560127 DNAJC19Q96DA6 116 aa13.54□□□□□ -0.24
RABGGTA-213ENST00000560127 ZSCAN31Q96LW9 406 aaPredicted RBP13.54□□□□□ -0.24
RABGGTA-213ENST00000560127 NACA2Q9H009 215 aa13.54□□□□□ -0.24
RABGGTA-213ENST00000560127 PLK2Q9NYY3 685 aa13.54□□□□□ -0.24
RABGGTA-213ENST00000560127 ANKRD6Q9Y2G4 727 aa13.54□□□□□ -0.24
RABGGTA-213ENST00000560127 BOD1L1Q8NFC6 3051 aa13.54□□□□□ -0.24
RABGGTA-213ENST00000560127 TEX51A0A1B0GUA7 166 aa13.53□□□□□ -0.24
RABGGTA-213ENST00000560127 H0Y8X5 98 aa13.53□□□□□ -0.24
RABGGTA-213ENST00000560127 CAPN9O14815 690 aa13.53□□□□□ -0.24
RABGGTA-213ENST00000560127 TLR5O60602 858 aa13.53□□□□□ -0.24
RABGGTA-213ENST00000560127 FAM163BP0C2L3 166 aa13.53□□□□□ -0.24
RABGGTA-213ENST00000560127 ACO1P21399 889 aaKnown RBP13.53□□□□□ -0.24
RABGGTA-213ENST00000560127 CCT8P50990 548 aa13.53□□□□□ -0.24
RABGGTA-213ENST00000560127 ZNF132P52740 706 aa13.53□□□□□ -0.24
RABGGTA-213ENST00000560127 COPAP53621 1224 aa13.53□□□□□ -0.24
RABGGTA-213ENST00000560127 CFHR1Q03591 330 aa13.53□□□□□ -0.24
RABGGTA-213ENST00000560127 SF3A1Q15459 793 aaKnown RBP13.53□□□□□ -0.24
RABGGTA-213ENST00000560127 GEN1Q17RS7 908 aa13.53□□□□□ -0.24
RABGGTA-213ENST00000560127 KCNT1Q5JUK3 1230 aa13.53□□□□□ -0.24
RABGGTA-213ENST00000560127 LAYNQ6UX15 382 aa13.53□□□□□ -0.24
RABGGTA-213ENST00000560127 TRAPPC11Q7Z392 1133 aa13.53□□□□□ -0.24
RABGGTA-213ENST00000560127 GPR155Q7Z3F1 870 aa13.53□□□□□ -0.24
RABGGTA-213ENST00000560127 FAM124AQ86V42 546 aa13.53□□□□□ -0.24
RABGGTA-213ENST00000560127 CACUL1Q86Y37 369 aa13.53□□□□□ -0.24
RABGGTA-213ENST00000560127 CBWD2Q8IUF1 395 aa13.53□□□□□ -0.24
RABGGTA-213ENST00000560127 SNX19Q92543 992 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms