RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 NME3Q13232 169 aa10.89□□□□□ -0.67
TPM1-221ENST00000559831 SLC25A52Q3SY17 297 aa10.89□□□□□ -0.67
TPM1-221ENST00000559831 RAB6CQ53S08 254 aa10.89□□□□□ -0.67
TPM1-221ENST00000559831 C10orf120Q5SQS8 335 aa10.89□□□□□ -0.67
TPM1-221ENST00000559831 RARS2Q5T160 578 aaKnown RBP10.89□□□□□ -0.67
TPM1-221ENST00000559831 CC2D1AQ6P1N0 951 aaPredicted RBP10.89□□□□□ -0.67
TPM1-221ENST00000559831 SCYL2Q6P3W7 929 aa10.89□□□□□ -0.67
TPM1-221ENST00000559831 TMC5Q6UXY8 1006 aa10.89□□□□□ -0.67
TPM1-221ENST00000559831 EP400NLQ6ZTU2 488 aa10.89□□□□□ -0.67
TPM1-221ENST00000559831 SLFN11Q7Z7L1 901 aa10.89□□□□□ -0.67
TPM1-221ENST00000559831 TAC4Q86UU9 113 aa10.89□□□□□ -0.67
TPM1-221ENST00000559831 NT5DC3Q86UY8 548 aa10.89□□□□□ -0.67
TPM1-221ENST00000559831 TMC8Q8IU68 726 aa10.89□□□□□ -0.67
TPM1-221ENST00000559831 EFHBQ8N7U6 833 aa10.89□□□□□ -0.67
TPM1-221ENST00000559831 NIPA2Q8N8Q9 360 aa10.89□□□□□ -0.67
TPM1-221ENST00000559831 DQX1Q8TE96 717 aaKnown RBP10.89□□□□□ -0.67
TPM1-221ENST00000559831 SMG7Q92540 1137 aaKnown RBP10.89□□□□□ -0.67
TPM1-221ENST00000559831 GAS2L1Q99501 681 aaPredicted RBP10.89□□□□□ -0.67
TPM1-221ENST00000559831 NAPGQ99747 312 aaPredicted RBP10.89□□□□□ -0.67
TPM1-221ENST00000559831 PRKD2Q9BZL6 878 aa10.89□□□□□ -0.67
TPM1-221ENST00000559831 NACA2Q9H009 215 aa10.89□□□□□ -0.67
TPM1-221ENST00000559831 RAB6CQ9H0N0 254 aa10.89□□□□□ -0.67
TPM1-221ENST00000559831 CCSER2Q9H7U1 834 aa10.89□□□□□ -0.67
TPM1-221ENST00000559831 ZWILCHQ9H900 591 aa10.89□□□□□ -0.67
TPM1-221ENST00000559831 SFXN1Q9H9B4 322 aa10.89□□□□□ -0.67
TPM1-221ENST00000559831 TRPC7Q9HCX4 862 aa10.89□□□□□ -0.67
TPM1-221ENST00000559831 DZANK1Q9NVP4 752 aa10.89□□□□□ -0.67
TPM1-221ENST00000559831 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.89□□□□□ -0.673e-7■■■□□ 15.3
TPM1-221ENST00000559831 ZDHHC7Q9NXF8 308 aa10.89□□□□□ -0.67
TPM1-221ENST00000559831 LMCD1Q9NZU5 365 aa10.89□□□□□ -0.67
TPM1-221ENST00000559831 RASAL2Q9UJF2 1139 aa10.89□□□□□ -0.67
TPM1-221ENST00000559831 MTCH2Q9Y6C9 303 aa10.89□□□□□ -0.67
TPM1-221ENST00000559831 HELZP42694 1942 aaKnown RBP10.89□□□□□ -0.67
TPM1-221ENST00000559831 CTAGE9A4FU28 777 aa10.88□□□□□ -0.67
TPM1-221ENST00000559831 ZNF840PA6NDX5 716 aa10.88□□□□□ -0.67
TPM1-221ENST00000559831 TLR5O60602 858 aa10.88□□□□□ -0.67
TPM1-221ENST00000559831 GLP2RO95838 553 aa10.88□□□□□ -0.67
TPM1-221ENST00000559831 TRUB2O95900 331 aaKnown RBP10.88□□□□□ -0.67
TPM1-221ENST00000559831 F11P03951 625 aa10.88□□□□□ -0.67
TPM1-221ENST00000559831 ATP1A1P05023 1023 aaKnown RBP10.88□□□□□ -0.67
TPM1-221ENST00000559831 RHOP08100 348 aa10.88□□□□□ -0.67
TPM1-221ENST00000559831 TCF4P15884 667 aa10.88□□□□□ -0.67
TPM1-221ENST00000559831 GJA1P17302 382 aa10.88□□□□□ -0.67
TPM1-221ENST00000559831 MIPP30301 263 aa10.88□□□□□ -0.67
TPM1-221ENST00000559831 CDC25CP30307 473 aa10.88□□□□□ -0.67
TPM1-221ENST00000559831 GBP1P32455 592 aa10.88□□□□□ -0.67
TPM1-221ENST00000559831 RDXP35241 583 aaKnown RBP10.88□□□□□ -0.67
TPM1-221ENST00000559831 PPP3CCP48454 512 aa10.88□□□□□ -0.67
TPM1-221ENST00000559831 RANBP2P49792 3224 aaKnown RBP10.88□□□□□ -0.67
TPM1-221ENST00000559831 ATXN1P54253 815 aaKnown RBP10.88□□□□□ -0.67
TPM1-221ENST00000559831 TAS2R40P59535 323 aa10.88□□□□□ -0.67
TPM1-221ENST00000559831 NTHL1P78549 312 aa10.88□□□□□ -0.67
TPM1-221ENST00000559831 CYP4F8P98187 520 aa10.88□□□□□ -0.67
TPM1-221ENST00000559831 DEUP1Q05D60 604 aa10.88□□□□□ -0.67
TPM1-221ENST00000559831 KCNC3Q14003 757 aa10.88□□□□□ -0.67
TPM1-221ENST00000559831 ADGRE1Q14246 886 aa10.88□□□□□ -0.67
TPM1-221ENST00000559831 ACAP1Q15027 740 aa10.88□□□□□ -0.67
TPM1-221ENST00000559831 RPS6KA1Q15418 735 aa10.88□□□□□ -0.67
TPM1-221ENST00000559831 DNTTIP2Q5QJE6 756 aaKnown RBP10.88□□□□□ -0.67
TPM1-221ENST00000559831 HECTD3Q5T447 861 aa10.88□□□□□ -0.67
TPM1-221ENST00000559831 ZFYVE27Q5T4F4 411 aa10.88□□□□□ -0.67
TPM1-221ENST00000559831 MEI1Q5TIA1 1274 aa10.88□□□□□ -0.67
TPM1-221ENST00000559831 OTUD1Q5VV17 481 aaPredicted RBP10.88□□□□□ -0.67
TPM1-221ENST00000559831 PDZD4Q76G19 769 aaPredicted RBP10.88□□□□□ -0.67
TPM1-221ENST00000559831 SND1Q7KZF4 910 aaKnown RBP eCLIP10.88□□□□□ -0.67
TPM1-221ENST00000559831 BEND5Q7L4P6 421 aa10.88□□□□□ -0.67
TPM1-221ENST00000559831 GRASPQ7Z6J2 395 aaPredicted RBP10.88□□□□□ -0.67
TPM1-221ENST00000559831 TADA2BQ86TJ2 420 aa10.88□□□□□ -0.67
TPM1-221ENST00000559831 MRPS31Q92665 395 aaKnown RBP10.88□□□□□ -0.67
TPM1-221ENST00000559831 RNF34Q969K3 372 aa10.88□□□□□ -0.67
TPM1-221ENST00000559831 ZNF707Q96C28 371 aaPredicted RBP10.88□□□□□ -0.67
TPM1-221ENST00000559831 CDK5RAP1Q96SZ6 601 aaKnown RBP10.88□□□□□ -0.67
TPM1-221ENST00000559831 NPY6RQ99463 290 aa10.88□□□□□ -0.67
TPM1-221ENST00000559831 LRRC3Q9BY71 257 aa10.88□□□□□ -0.67
TPM1-221ENST00000559831 ADAM33Q9BZ11 813 aa10.88□□□□□ -0.67
TPM1-221ENST00000559831 ATXN3LQ9H3M9 355 aa10.88□□□□□ -0.67
TPM1-221ENST00000559831 IL21Q9HBE4 155 aa10.88□□□□□ -0.67
TPM1-221ENST00000559831 OLA1Q9NTK5 396 aaKnown RBP10.88□□□□□ -0.67
TPM1-221ENST00000559831 DDIT4Q9NX09 232 aa10.88□□□□□ -0.67
TPM1-221ENST00000559831 RRN3Q9NYV6 651 aa10.88□□□□□ -0.67
TPM1-221ENST00000559831 CLIC5Q9NZA1 410 aa10.88□□□□□ -0.67
TPM1-221ENST00000559831 DNMT3BQ9UBC3 853 aaKnown RBP10.88□□□□□ -0.67
TPM1-221ENST00000559831 PCSK1NQ9UHG2 260 aa10.88□□□□□ -0.67
TPM1-221ENST00000559831 SFMBT1Q9UHJ3 866 aa10.88□□□□□ -0.67
TPM1-221ENST00000559831 JRKLQ9Y4A0 524 aa10.88□□□□□ -0.67
TPM1-221ENST00000559831 CHD9Q3L8U1 2897 aa10.87□□□□□ -0.67
TPM1-221ENST00000559831 A0A1W2PRU2 124 aa10.87□□□□□ -0.67
TPM1-221ENST00000559831 C2orf78A6NCI8 922 aa10.87□□□□□ -0.67
TPM1-221ENST00000559831 MSI1O43347 362 aaKnown RBP10.87□□□□□ -0.67
TPM1-221ENST00000559831 PRPSAP2O60256 369 aa10.87□□□□□ -0.67
TPM1-221ENST00000559831 LRCH4O75427 683 aa10.87□□□□□ -0.67
TPM1-221ENST00000559831 FGF19O95750 216 aa10.87□□□□□ -0.67
TPM1-221ENST00000559831 TBX18O95935 607 aa10.87□□□□□ -0.67
TPM1-221ENST00000559831 HMBSP08397 361 aa10.87□□□□□ -0.67
TPM1-221ENST00000559831 CTNNA2P26232 953 aa10.87□□□□□ -0.67
TPM1-221ENST00000559831 MARCKSL1P49006 195 aa10.87□□□□□ -0.67
TPM1-221ENST00000559831 HDAC4P56524 1084 aa10.87□□□□□ -0.67
TPM1-221ENST00000559831 HADHQ16836 314 aaKnown RBP10.87□□□□□ -0.67
TPM1-221ENST00000559831 PABPC1LQ4VXU2 614 aaKnown RBP10.87□□□□□ -0.67
TPM1-221ENST00000559831 SNX30Q5VWJ9 437 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms