RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 STARD13Q9Y3M8 1113 aa15.72■□□□□ 0.11
LRRC28-213ENST00000559399 USP3Q9Y6I4 520 aa15.72■□□□□ 0.11
LRRC28-213ENST00000559399 HELZP42694 1942 aaKnown RBP15.71■□□□□ 0.11
LRRC28-213ENST00000559399 ANAPC1Q9H1A4 1944 aa15.71■□□□□ 0.11
LRRC28-213ENST00000559399 C4orf47A7E2U8 309 aa15.71■□□□□ 0.11
LRRC28-213ENST00000559399 NTSR1P30989 418 aa15.71■□□□□ 0.11
LRRC28-213ENST00000559399 PNOCQ13519 176 aa15.71■□□□□ 0.11
LRRC28-213ENST00000559399 N4BP2L1Q5TBK1 243 aaPredicted RBP15.71■□□□□ 0.11
LRRC28-213ENST00000559399 DAB2IPQ5VWQ8 1189 aa15.71■□□□□ 0.11
LRRC28-213ENST00000559399 Q6ZNB5 142 aa15.71■□□□□ 0.11
LRRC28-213ENST00000559399 SCD5Q86SK9 330 aa15.71■□□□□ 0.11
LRRC28-213ENST00000559399 ZNF276Q8N554 614 aa15.71■□□□□ 0.11
LRRC28-213ENST00000559399 PIGKQ92643 395 aa15.71■□□□□ 0.11
LRRC28-213ENST00000559399 TMEM176AQ96HP8 235 aa15.71■□□□□ 0.11
LRRC28-213ENST00000559399 ARID3AQ99856 593 aa15.71■□□□□ 0.11
LRRC28-213ENST00000559399 FAM124BQ9H5Z6 455 aaPredicted RBP15.71■□□□□ 0.11
LRRC28-213ENST00000559399 MBD1Q9UIS9 605 aaPredicted RBP15.71■□□□□ 0.11
LRRC28-213ENST00000559399 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.7■□□□□ 0.1
LRRC28-213ENST00000559399 PATE3B3GLJ2 98 aa15.7■□□□□ 0.1
LRRC28-213ENST00000559399 SLC16A3O15427 465 aaKnown RBP15.7■□□□□ 0.1
LRRC28-213ENST00000559399 ZBTB24O43167 697 aaPredicted RBP15.7■□□□□ 0.1
LRRC28-213ENST00000559399 STC2O76061 302 aa15.7■□□□□ 0.1
LRRC28-213ENST00000559399 KCNK5O95279 499 aa15.7■□□□□ 0.1
LRRC28-213ENST00000559399 PMLP29590 882 aa15.7■□□□□ 0.1
LRRC28-213ENST00000559399 PTGER3P43115 390 aa15.7■□□□□ 0.1
LRRC28-213ENST00000559399 DGKGP49619 791 aa15.7■□□□□ 0.1
LRRC28-213ENST00000559399 RAD23BP54727 409 aa15.7■□□□□ 0.1
LRRC28-213ENST00000559399 SLC8A3P57103 927 aa15.7■□□□□ 0.1
LRRC28-213ENST00000559399 DCAF17Q5H9S7 520 aaPredicted RBP15.7■□□□□ 0.1
LRRC28-213ENST00000559399 SPDYCQ5MJ68 293 aa15.7■□□□□ 0.1
LRRC28-213ENST00000559399 LYSMD4Q5XG99 296 aa15.7■□□□□ 0.1
LRRC28-213ENST00000559399 EGFLAMQ63HQ2 1017 aa15.7■□□□□ 0.1
LRRC28-213ENST00000559399 ARHGAP17Q68EM7 881 aa15.7■□□□□ 0.1
LRRC28-213ENST00000559399 SDE2Q6IQ49 451 aa15.7■□□□□ 0.1
LRRC28-213ENST00000559399 ARMCX6Q7L4S7 300 aa15.7■□□□□ 0.1
LRRC28-213ENST00000559399 TMEFF1Q8IYR6 380 aa15.7■□□□□ 0.1
LRRC28-213ENST00000559399 CHPFQ8IZ52 775 aa15.7■□□□□ 0.1
LRRC28-213ENST00000559399 ARHGAP18Q8N392 663 aa15.7■□□□□ 0.1
LRRC28-213ENST00000559399 FRMD1Q8N878 549 aa15.7■□□□□ 0.1
LRRC28-213ENST00000559399 SLC4A11Q8NBS3 891 aa15.7■□□□□ 0.1
LRRC28-213ENST00000559399 BHMTQ93088 406 aa15.7■□□□□ 0.1
LRRC28-213ENST00000559399 TSG101Q99816 390 aa15.7■□□□□ 0.1
LRRC28-213ENST00000559399 TMEM9BQ9NQ34 198 aa15.7■□□□□ 0.1
LRRC28-213ENST00000559399 CALCOCO1Q9P1Z2 691 aa15.7■□□□□ 0.1
LRRC28-213ENST00000559399 EVLQ9UI08 416 aaPredicted RBP15.7■□□□□ 0.1
LRRC28-213ENST00000559399 RASAL2Q9UJF2 1139 aa15.7■□□□□ 0.1
LRRC28-213ENST00000559399 ANGPTL2Q9UKU9 493 aa15.7■□□□□ 0.1
LRRC28-213ENST00000559399 HCN2Q9UL51 889 aa15.7■□□□□ 0.1
LRRC28-213ENST00000559399 A0A1W2PQF6 199 aa15.69■□□□□ 0.1
LRRC28-213ENST00000559399 PRRT4C9JH25 899 aa15.69■□□□□ 0.1
LRRC28-213ENST00000559399 GABRG2P18507 467 aa15.69■□□□□ 0.1
LRRC28-213ENST00000559399 DPP6P42658 865 aa15.69■□□□□ 0.1
LRRC28-213ENST00000559399 WASP42768 502 aa15.69■□□□□ 0.1
LRRC28-213ENST00000559399 PRCPP42785 496 aa15.69■□□□□ 0.1
LRRC28-213ENST00000559399 COG7P83436 770 aa15.69■□□□□ 0.1
LRRC28-213ENST00000559399 CBWD6Q4V339 395 aa15.69■□□□□ 0.1
LRRC28-213ENST00000559399 CBWD3Q5JTY5 395 aa15.69■□□□□ 0.1
LRRC28-213ENST00000559399 CBWD5Q5RIA9 395 aa15.69■□□□□ 0.1
LRRC28-213ENST00000559399 ZNF658Q5TYW1 1059 aaPredicted RBP15.69■□□□□ 0.1
LRRC28-213ENST00000559399 TCERG1LQ5VWI1 586 aa15.69■□□□□ 0.1
LRRC28-213ENST00000559399 PSAPL1Q6NUJ1 521 aa15.69■□□□□ 0.1
LRRC28-213ENST00000559399 TOGARAM2Q6ZUX3 1019 aa15.69■□□□□ 0.1
LRRC28-213ENST00000559399 PIGZQ86VD9 579 aa15.69■□□□□ 0.1
LRRC28-213ENST00000559399 SYT12Q8IV01 421 aa15.69■□□□□ 0.1
LRRC28-213ENST00000559399 FMR1NBQ8N0W7 255 aaPredicted RBP15.69■□□□□ 0.1
LRRC28-213ENST00000559399 GSDMAQ96QA5 445 aa15.69■□□□□ 0.1
LRRC28-213ENST00000559399 ACOX2Q99424 681 aa15.69■□□□□ 0.1
LRRC28-213ENST00000559399 UBXN6Q9BZV1 441 aa15.69■□□□□ 0.1
LRRC28-213ENST00000559399 ZNF510Q9Y2H8 683 aa15.69■□□□□ 0.1
LRRC28-213ENST00000559399 ZNF638Q14966 1978 aaKnown RBP15.69■□□□□ 0.1
LRRC28-213ENST00000559399 SPTBN2O15020 2390 aa15.68■□□□□ 0.1
LRRC28-213ENST00000559399 GOLGA6L4A6NEF3 574 aa15.68■□□□□ 0.1
LRRC28-213ENST00000559399 AP5Z1O43299 807 aa15.68■□□□□ 0.1
LRRC28-213ENST00000559399 SMC2O95347 1197 aa15.68■□□□□ 0.1
LRRC28-213ENST00000559399 KLKB1P03952 638 aa15.68■□□□□ 0.1
LRRC28-213ENST00000559399 NOVA1P51513 510 aaKnown RBP15.68■□□□□ 0.1
LRRC28-213ENST00000559399 IRX4P78413 519 aa15.68■□□□□ 0.1
LRRC28-213ENST00000559399 FKBP3Q00688 224 aaKnown RBP15.68■□□□□ 0.1
LRRC28-213ENST00000559399 EFEMP1Q12805 493 aa15.68■□□□□ 0.1
LRRC28-213ENST00000559399 LMAN2Q12907 356 aa15.68■□□□□ 0.1
LRRC28-213ENST00000559399 COBLL1Q53SF7 1204 aa15.68■□□□□ 0.1
LRRC28-213ENST00000559399 TRIM61Q5EBN2 209 aa15.68■□□□□ 0.1
LRRC28-213ENST00000559399 SLC36A4Q6YBV0 504 aa15.68■□□□□ 0.1
LRRC28-213ENST00000559399 RSRC2Q7L4I2 434 aaKnown RBP15.68■□□□□ 0.1
LRRC28-213ENST00000559399 ZC3H3Q8IXZ2 948 aaKnown RBP15.68■□□□□ 0.1
LRRC28-213ENST00000559399 ANKRD52Q8NB46 1076 aa15.68■□□□□ 0.1
LRRC28-213ENST00000559399 GABRG3Q99928 467 aa15.68■□□□□ 0.1
LRRC28-213ENST00000559399 DCLK3Q9C098 648 aa15.68■□□□□ 0.1
LRRC28-213ENST00000559399 PLK2Q9NYY3 685 aa15.68■□□□□ 0.1
LRRC28-213ENST00000559399 STRIP2Q9ULQ0 834 aa15.68■□□□□ 0.1
LRRC28-213ENST00000559399 ZNF217O75362 1048 aa15.67■□□□□ 0.1
LRRC28-213ENST00000559399 PENKP01210 267 aaPredicted RBP15.67■□□□□ 0.1
LRRC28-213ENST00000559399 CISD3P0C7P0 127 aa15.67■□□□□ 0.1
LRRC28-213ENST00000559399 NDUFV2P19404 249 aa15.67■□□□□ 0.1
LRRC28-213ENST00000559399 CORO1AP31146 461 aaKnown RBP15.67■□□□□ 0.1
LRRC28-213ENST00000559399 HOXD12P35452 270 aa15.67■□□□□ 0.1
LRRC28-213ENST00000559399 CHKAP35790 457 aa15.67■□□□□ 0.1
LRRC28-213ENST00000559399 TKTL1P51854 596 aa15.67■□□□□ 0.1
LRRC28-213ENST00000559399 YWHAGP61981 247 aaKnown RBP eCLIP15.67■□□□□ 0.1
LRRC28-213ENST00000559399 SHC2P98077 582 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms