RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 MATKP42679 507 aa15.49■□□□□ 0.07
SNRPA1-207ENST00000559309 MAGEA1P43355 309 aa15.49■□□□□ 0.07
SNRPA1-207ENST00000559309 PTPN9P43378 593 aa15.49■□□□□ 0.07
SNRPA1-207ENST00000559309 VAV2P52735 878 aa15.49■□□□□ 0.07
SNRPA1-207ENST00000559309 RPL7AP62424 266 aaKnown RBP15.49■□□□□ 0.07
SNRPA1-207ENST00000559309 ZNF252P-AS1Q0IIN9 211 aa15.49■□□□□ 0.07
SNRPA1-207ENST00000559309 IFRD2Q12894 506 aaPredicted RBP15.49■□□□□ 0.07
SNRPA1-207ENST00000559309 NNTQ13423 1086 aa15.49■□□□□ 0.07
SNRPA1-207ENST00000559309 TAF12Q16514 161 aa15.49■□□□□ 0.07
SNRPA1-207ENST00000559309 PUS10Q3MIT2 529 aaKnown RBP15.49■□□□□ 0.07
SNRPA1-207ENST00000559309 HECTD3Q5T447 861 aa15.49■□□□□ 0.07
SNRPA1-207ENST00000559309 TXNDC8Q6A555 127 aa15.49■□□□□ 0.07
SNRPA1-207ENST00000559309 DEFB106AQ8N104 65 aa15.49■□□□□ 0.07
SNRPA1-207ENST00000559309 MRPS31Q92665 395 aaKnown RBP15.49■□□□□ 0.07
SNRPA1-207ENST00000559309 FGF13Q92913 245 aa15.49■□□□□ 0.07
SNRPA1-207ENST00000559309 ZNF653Q96CK0 615 aa15.49■□□□□ 0.07
SNRPA1-207ENST00000559309 ZSWIM3Q96MP5 696 aa15.49■□□□□ 0.07
SNRPA1-207ENST00000559309 CDK5RAP1Q96SZ6 601 aaKnown RBP15.49■□□□□ 0.07
SNRPA1-207ENST00000559309 ATXN3LQ9H3M9 355 aa15.49■□□□□ 0.07
SNRPA1-207ENST00000559309 SMOC2Q9H3U7 446 aa15.49■□□□□ 0.07
SNRPA1-207ENST00000559309 SYNCQ9H7C4 482 aa15.49■□□□□ 0.07
SNRPA1-207ENST00000559309 RRN3Q9NYV6 651 aa15.49■□□□□ 0.07
SNRPA1-207ENST00000559309 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.49■□□□□ 0.07
SNRPA1-207ENST00000559309 CALCOCO1Q9P1Z2 691 aa15.49■□□□□ 0.07
SNRPA1-207ENST00000559309 EPS15L1Q9UBC2 864 aa15.49■□□□□ 0.07
SNRPA1-207ENST00000559309 NAALADL1Q9UQQ1 740 aa15.49■□□□□ 0.07
SNRPA1-207ENST00000559309 MRPS23Q9Y3D9 190 aaKnown RBP15.49■□□□□ 0.07
SNRPA1-207ENST00000559309 ZFP37Q9Y6Q3 630 aaPredicted RBP15.49■□□□□ 0.07
SNRPA1-207ENST00000559309 SCINQ9Y6U3 715 aa15.49■□□□□ 0.07
SNRPA1-207ENST00000559309 SPDYE4A6NLX3 237 aa15.48■□□□□ 0.07
SNRPA1-207ENST00000559309 GJB6O95452 261 aa15.48■□□□□ 0.07
SNRPA1-207ENST00000559309 TBX18O95935 607 aa15.48■□□□□ 0.07
SNRPA1-207ENST00000559309 IGLV3-27P01718 113 aa15.48■□□□□ 0.07
SNRPA1-207ENST00000559309 KRT3P12035 628 aa15.48■□□□□ 0.07
SNRPA1-207ENST00000559309 ABCB4P21439 1286 aa15.48■□□□□ 0.07
SNRPA1-207ENST00000559309 FCARP24071 287 aa15.48■□□□□ 0.07
SNRPA1-207ENST00000559309 PITX1P78337 314 aaPredicted RBP15.48■□□□□ 0.07
SNRPA1-207ENST00000559309 KRT83P78385 493 aa15.48■□□□□ 0.07
SNRPA1-207ENST00000559309 OGDHQ02218 1023 aa15.48■□□□□ 0.07
SNRPA1-207ENST00000559309 BTBD8Q5XKL5 378 aa15.48■□□□□ 0.07
SNRPA1-207ENST00000559309 CMTM8Q8IZV2 173 aa15.48■□□□□ 0.07
SNRPA1-207ENST00000559309 KIAA1958Q8N8K9 716 aa15.48■□□□□ 0.07
SNRPA1-207ENST00000559309 DQX1Q8TE96 717 aaKnown RBP15.48■□□□□ 0.07
SNRPA1-207ENST00000559309 CTNNBL1Q8WYA6 563 aaPredicted RBP15.48■□□□□ 0.07
SNRPA1-207ENST00000559309 RFFLQ8WZ73 363 aa15.48■□□□□ 0.07
SNRPA1-207ENST00000559309 SLC39A13Q96H72 371 aa15.48■□□□□ 0.07
SNRPA1-207ENST00000559309 MYADMQ96S97 322 aa15.48■□□□□ 0.07
SNRPA1-207ENST00000559309 LACRTQ9GZZ8 138 aa15.48■□□□□ 0.07
SNRPA1-207ENST00000559309 METTL5Q9NRN9 209 aaKnown RBP15.48■□□□□ 0.07
SNRPA1-207ENST00000559309 OLA1Q9NTK5 396 aaKnown RBP15.48■□□□□ 0.07
SNRPA1-207ENST00000559309 UVRAGQ9P2Y5 699 aa15.48■□□□□ 0.07
SNRPA1-207ENST00000559309 SALL4Q9UJQ4 1053 aa15.48■□□□□ 0.07
SNRPA1-207ENST00000559309 CDH7Q9ULB5 785 aa15.48■□□□□ 0.07
SNRPA1-207ENST00000559309 A0A0U1RQJ8 604 aa15.47■□□□□ 0.07
SNRPA1-207ENST00000559309 FAM170AA1A519 330 aa15.47■□□□□ 0.07
SNRPA1-207ENST00000559309 GOLGA8SH3BPF8 625 aa15.47■□□□□ 0.07
SNRPA1-207ENST00000559309 RALAP11233 206 aa15.47■□□□□ 0.07
SNRPA1-207ENST00000559309 ZNF143P52747 638 aaPredicted RBP15.47■□□□□ 0.07
SNRPA1-207ENST00000559309 TFF2Q03403 129 aa15.47■□□□□ 0.07
SNRPA1-207ENST00000559309 SPA17Q15506 151 aa15.47■□□□□ 0.07
SNRPA1-207ENST00000559309 CLUL1Q15846 466 aa15.47■□□□□ 0.07
SNRPA1-207ENST00000559309 SLC25A52Q3SY17 297 aa15.47■□□□□ 0.07
SNRPA1-207ENST00000559309 CCDC14Q49A88 953 aa15.47■□□□□ 0.07
SNRPA1-207ENST00000559309 DNAJC24Q6P3W2 148 aa15.47■□□□□ 0.07
SNRPA1-207ENST00000559309 RHOT2Q8IXI1 618 aa15.47■□□□□ 0.07
SNRPA1-207ENST00000559309 EMC1Q8N766 993 aa15.47■□□□□ 0.07
SNRPA1-207ENST00000559309 NIPA2Q8N8Q9 360 aa15.47■□□□□ 0.07
SNRPA1-207ENST00000559309 ATRIPQ8WXE1 791 aa15.47■□□□□ 0.07
SNRPA1-207ENST00000559309 EDEM1Q92611 657 aa15.47■□□□□ 0.07
SNRPA1-207ENST00000559309 ZNF830Q96NB3 372 aaPredicted RBP15.47■□□□□ 0.07
SNRPA1-207ENST00000559309 ASB16Q96NS5 453 aa15.47■□□□□ 0.07
SNRPA1-207ENST00000559309 DESI2Q9BSY9 194 aa15.47■□□□□ 0.07
SNRPA1-207ENST00000559309 KLF16Q9BXK1 252 aaPredicted RBP15.47■□□□□ 0.07
SNRPA1-207ENST00000559309 TRIM7Q9C029 511 aa15.47■□□□□ 0.07
SNRPA1-207ENST00000559309 MRPL47Q9HD33 250 aaKnown RBP15.47■□□□□ 0.07
SNRPA1-207ENST00000559309 TMEM51Q9NW97 253 aa15.47■□□□□ 0.07
SNRPA1-207ENST00000559309 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.47■□□□□ 0.07
SNRPA1-207ENST00000559309 ARHGAP26Q9UNA1 814 aa15.47■□□□□ 0.07
SNRPA1-207ENST00000559309 ANHXE9PGG2 379 aa15.46■□□□□ 0.07
SNRPA1-207ENST00000559309 IRAK2O43187 625 aa15.46■□□□□ 0.07
SNRPA1-207ENST00000559309 GRAP2O75791 330 aa15.46■□□□□ 0.07
SNRPA1-207ENST00000559309 LAMP2P13473 410 aa15.46■□□□□ 0.07
SNRPA1-207ENST00000559309 NCAM1P13591 858 aa15.46■□□□□ 0.07
SNRPA1-207ENST00000559309 TFE3P19532 575 aaPredicted RBP15.46■□□□□ 0.07
SNRPA1-207ENST00000559309 ATP5C1P36542 298 aaKnown RBP15.46■□□□□ 0.07
SNRPA1-207ENST00000559309 ARHGAP25P42331 645 aa15.46■□□□□ 0.07
SNRPA1-207ENST00000559309 RING1Q06587 406 aa15.46■□□□□ 0.07
SNRPA1-207ENST00000559309 ARHGAP15Q53QZ3 475 aa15.46■□□□□ 0.07
SNRPA1-207ENST00000559309 ARTNQ5T4W7 220 aa15.46■□□□□ 0.07
SNRPA1-207ENST00000559309 GPR158Q5T848 1215 aa15.46■□□□□ 0.07
SNRPA1-207ENST00000559309 STRADAQ7RTN6 431 aa15.46■□□□□ 0.07
SNRPA1-207ENST00000559309 PHLDB2Q86SQ0 1253 aa15.46■□□□□ 0.07
SNRPA1-207ENST00000559309 ARFGAP1Q8N6T3 406 aa15.46■□□□□ 0.07
SNRPA1-207ENST00000559309 ARL14EPQ8N8R7 260 aaPredicted RBP15.46■□□□□ 0.07
SNRPA1-207ENST00000559309 MAB21L3Q8N8X9 362 aa15.46■□□□□ 0.07
SNRPA1-207ENST00000559309 RIN3Q8TB24 985 aa15.46■□□□□ 0.07
SNRPA1-207ENST00000559309 RXFP2Q8WXD0 754 aa15.46■□□□□ 0.07
SNRPA1-207ENST00000559309 FAM149B1Q96BN6 582 aa15.46■□□□□ 0.07
SNRPA1-207ENST00000559309 NECAB3Q96P71 396 aaPredicted RBP15.46■□□□□ 0.07
SNRPA1-207ENST00000559309 MCEEQ96PE7 176 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms