RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 SYT13Q7L8C5 426 aa12.56□□□□□ -0.4
CASC4-208ENST00000559151 ESX1Q8N693 406 aa12.56□□□□□ -0.4
CASC4-208ENST00000559151 CEP70Q8NHQ1 597 aa12.56□□□□□ -0.4
CASC4-208ENST00000559151 PRR25Q96S07 402 aa12.56□□□□□ -0.4
CASC4-208ENST00000559151 PAAF1Q9BRP4 392 aa12.56□□□□□ -0.4
CASC4-208ENST00000559151 AIFM2Q9BRQ8 373 aa12.56□□□□□ -0.4
CASC4-208ENST00000559151 CHODLQ9H9P2 273 aa12.56□□□□□ -0.4
CASC4-208ENST00000559151 SLC2A4RGQ9NR83 387 aa12.56□□□□□ -0.4
CASC4-208ENST00000559151 TSC22D4Q9Y3Q8 395 aa12.56□□□□□ -0.4
CASC4-208ENST00000559151 GXYLT2A0PJZ3 443 aa12.55□□□□□ -0.4
CASC4-208ENST00000559151 WDR27A2RRH5 827 aa12.55□□□□□ -0.4
CASC4-208ENST00000559151 J3KRW8 73 aa12.55□□□□□ -0.4
CASC4-208ENST00000559151 EPB41L2O43491 1005 aaKnown RBP12.55□□□□□ -0.4
CASC4-208ENST00000559151 MCM5P33992 734 aa12.55□□□□□ -0.4
CASC4-208ENST00000559151 CTSWP56202 376 aa12.55□□□□□ -0.4
CASC4-208ENST00000559151 SLC12A1Q13621 1099 aa12.55□□□□□ -0.4
CASC4-208ENST00000559151 TXNRD1Q16881 649 aa12.55□□□□□ -0.4
CASC4-208ENST00000559151 KCNV1Q6PIU1 500 aa12.55□□□□□ -0.4
CASC4-208ENST00000559151 KRT27Q7Z3Y8 459 aa12.55□□□□□ -0.4
CASC4-208ENST00000559151 P3H2Q8IVL5 708 aa12.55□□□□□ -0.4
CASC4-208ENST00000559151 HAS1Q92839 578 aa12.55□□□□□ -0.4
CASC4-208ENST00000559151 CTHRC1Q96CG8 243 aa12.55□□□□□ -0.4
CASC4-208ENST00000559151 MLST8Q9BVC4 326 aa12.55□□□□□ -0.4
CASC4-208ENST00000559151 WDR11Q9BZH6 1224 aa12.55□□□□□ -0.4
CASC4-208ENST00000559151 CCDC134Q9H6E4 229 aa12.55□□□□□ -0.4
CASC4-208ENST00000559151 PIPSLA2A3N6 862 aa12.54□□□□□ -0.4
CASC4-208ENST00000559151 A8MVJ9 347 aa12.54□□□□□ -0.4
CASC4-208ENST00000559151 M0QYT0 321 aa12.54□□□□□ -0.4
CASC4-208ENST00000559151 PEX11BO96011 259 aa12.54□□□□□ -0.4
CASC4-208ENST00000559151 PTGS2P35354 604 aa12.54□□□□□ -0.4
CASC4-208ENST00000559151 LMOD3Q0VAK6 560 aa12.54□□□□□ -0.4
CASC4-208ENST00000559151 G3BP1Q13283 466 aaKnown RBP eCLIP12.54□□□□□ -0.4
CASC4-208ENST00000559151 KCNJ12Q14500 433 aa12.54□□□□□ -0.4
CASC4-208ENST00000559151 PTPRRQ15256 657 aa12.54□□□□□ -0.4
CASC4-208ENST00000559151 SMAD1Q15797 465 aaKnown RBP12.54□□□□□ -0.4
CASC4-208ENST00000559151 TMEM57Q8N5G2 664 aa12.54□□□□□ -0.4
CASC4-208ENST00000559151 RFKQ969G6 155 aa12.54□□□□□ -0.4
CASC4-208ENST00000559151 PBKQ96KB5 322 aa12.54□□□□□ -0.4
CASC4-208ENST00000559151 WASH6PQ9NQA3 447 aa12.54□□□□□ -0.4
CASC4-208ENST00000559151 ASAP1Q9ULH1 1129 aa12.54□□□□□ -0.4
CASC4-208ENST00000559151 SH2B3Q9UQQ2 575 aa12.54□□□□□ -0.4
CASC4-208ENST00000559151 SLC38A8A6NNN8 435 aa12.53□□□□□ -0.4
CASC4-208ENST00000559151 M0QZQ0 153 aa12.53□□□□□ -0.4
CASC4-208ENST00000559151 PEX1O43933 1283 aa12.53□□□□□ -0.4
CASC4-208ENST00000559151 LARGE1O95461 756 aa12.53□□□□□ -0.4
CASC4-208ENST00000559151 ALADP13716 330 aa12.53□□□□□ -0.4
CASC4-208ENST00000559151 DGKQP52824 942 aa12.53□□□□□ -0.4
CASC4-208ENST00000559151 PDE1AP54750 535 aa12.53□□□□□ -0.4
CASC4-208ENST00000559151 DEUP1Q05D60 604 aa12.53□□□□□ -0.4
CASC4-208ENST00000559151 SEMA3BQ13214 749 aa12.53□□□□□ -0.4
CASC4-208ENST00000559151 ABHD17BQ5VST6 288 aa12.53□□□□□ -0.4
CASC4-208ENST00000559151 PROKR1Q8TCW9 393 aa12.53□□□□□ -0.4
CASC4-208ENST00000559151 TFAP2BQ92481 460 aa12.53□□□□□ -0.4
CASC4-208ENST00000559151 SERHL2Q9H4I8 314 aa12.53□□□□□ -0.4
CASC4-208ENST00000559151 GABRQQ9UN88 632 aa12.53□□□□□ -0.4
CASC4-208ENST00000559151 LOC105369274A0A096LPK9 316 aa12.52□□□□□ -0.41
CASC4-208ENST00000559151 LOC102723532A0A0G2JNH3 316 aa12.52□□□□□ -0.41
CASC4-208ENST00000559151 AP4M1O00189 453 aa12.52□□□□□ -0.41
CASC4-208ENST00000559151 CA12O43570 354 aa12.52□□□□□ -0.41
CASC4-208ENST00000559151 NXPH3O95157 252 aa12.52□□□□□ -0.41
CASC4-208ENST00000559151 ONECUT2O95948 504 aa12.52□□□□□ -0.41
CASC4-208ENST00000559151 CYP21A2P08686 494 aa12.52□□□□□ -0.41
CASC4-208ENST00000559151 ZFXP17010 805 aaPredicted RBP12.52□□□□□ -0.41
CASC4-208ENST00000559151 CTGFP29279 349 aa12.52□□□□□ -0.41
CASC4-208ENST00000559151 THBS4P35443 961 aa12.52□□□□□ -0.41
CASC4-208ENST00000559151 CDK7P50613 346 aa12.52□□□□□ -0.41
CASC4-208ENST00000559151 TPTEP56180 551 aa12.52□□□□□ -0.41
CASC4-208ENST00000559151 E2F1Q01094 437 aa12.52□□□□□ -0.41
CASC4-208ENST00000559151 PDCLQ13371 301 aa12.52□□□□□ -0.41
CASC4-208ENST00000559151 ANKS1BQ7Z6G8 1248 aa12.52□□□□□ -0.41
CASC4-208ENST00000559151 HEATR4Q86WZ0 1026 aa12.52□□□□□ -0.41
CASC4-208ENST00000559151 OR4N4Q8N0Y3 316 aa12.52□□□□□ -0.41
CASC4-208ENST00000559151 LRRC71Q8N4P6 559 aa12.52□□□□□ -0.41
CASC4-208ENST00000559151 REXO5Q96IC2 774 aaKnown RBP12.52□□□□□ -0.41
CASC4-208ENST00000559151 VPS50Q96JG6 964 aa12.52□□□□□ -0.41
CASC4-208ENST00000559151 TWNKQ96RR1 684 aa12.52□□□□□ -0.41
CASC4-208ENST00000559151 SEC62Q99442 399 aaKnown RBP12.52□□□□□ -0.41
CASC4-208ENST00000559151 C1QTNF3Q9BXJ4 246 aa12.52□□□□□ -0.41
CASC4-208ENST00000559151 LIN7CQ9NUP9 197 aaKnown RBP12.52□□□□□ -0.41
CASC4-208ENST00000559151 FBXO28Q9NVF7 368 aa12.52□□□□□ -0.41
CASC4-208ENST00000559151 RAPGEFL1Q9UHV5 662 aa12.52□□□□□ -0.41
CASC4-208ENST00000559151 CCNL1Q9UK58 526 aaPredicted RBP12.52□□□□□ -0.41
CASC4-208ENST00000559151 ZBTB1Q9Y2K1 713 aa12.52□□□□□ -0.41
CASC4-208ENST00000559151 FAM90A20PA6NIJ5 464 aa12.51□□□□□ -0.41
CASC4-208ENST00000559151 NR2F6P10588 404 aa12.51□□□□□ -0.41
CASC4-208ENST00000559151 CREB1P16220 341 aa12.51□□□□□ -0.41
CASC4-208ENST00000559151 TNFAIP3P21580 790 aa12.51□□□□□ -0.41
CASC4-208ENST00000559151 PCSK6P29122 969 aa12.51□□□□□ -0.41
CASC4-208ENST00000559151 FOLR3P41439 243 aa12.51□□□□□ -0.41
CASC4-208ENST00000559151 CCR5P51681 352 aa12.51□□□□□ -0.41
CASC4-208ENST00000559151 FAM3BP58499 235 aaPredicted RBP12.51□□□□□ -0.41
CASC4-208ENST00000559151 TLE2Q04725 743 aa12.51□□□□□ -0.41
CASC4-208ENST00000559151 UBE3AQ05086 875 aa12.51□□□□□ -0.41
CASC4-208ENST00000559151 BMPR2Q13873 1038 aa12.51□□□□□ -0.41
CASC4-208ENST00000559151 DGAT2L7PQ6IED9 249 aa12.51□□□□□ -0.41
CASC4-208ENST00000559151 MRGPREQ86SM8 312 aa12.51□□□□□ -0.41
CASC4-208ENST00000559151 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.51□□□□□ -0.41
CASC4-208ENST00000559151 OVCA2Q8WZ82 227 aa12.51□□□□□ -0.41
CASC4-208ENST00000559151 ABHD16BQ9H3Z7 469 aa12.51□□□□□ -0.41
CASC4-208ENST00000559151 RASSF1Q9NS23 344 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms