RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 LEFTY2O00292 366 aa11.4□□□□□ -0.58
TPM1-217ENST00000559108 ECI2O75521 394 aa11.4□□□□□ -0.58
TPM1-217ENST00000559108 DAB1O75553 588 aa11.4□□□□□ -0.58
TPM1-217ENST00000559108 FBXO21O94952 628 aa11.4□□□□□ -0.58
TPM1-217ENST00000559108 MBL2P11226 248 aaPredicted RBP11.4□□□□□ -0.58
TPM1-217ENST00000559108 DDX6P26196 483 aaKnown RBP eCLIP11.4□□□□□ -0.58
TPM1-217ENST00000559108 PPP3CCP48454 512 aa11.4□□□□□ -0.58
TPM1-217ENST00000559108 ATXN1P54253 815 aaKnown RBP11.4□□□□□ -0.58
TPM1-217ENST00000559108 TNK2Q07912 1038 aa11.4□□□□□ -0.58
TPM1-217ENST00000559108 ZNF252P-AS1Q0IIN9 211 aa11.4□□□□□ -0.58
TPM1-217ENST00000559108 FCHO2Q0JRZ9 810 aa11.4□□□□□ -0.58
TPM1-217ENST00000559108 MAPK8IP2Q13387 824 aaPredicted RBP11.4□□□□□ -0.58
TPM1-217ENST00000559108 C10orf120Q5SQS8 335 aa11.4□□□□□ -0.58
TPM1-217ENST00000559108 FAM102AQ5T9C2 384 aaPredicted RBP11.4□□□□□ -0.58
TPM1-217ENST00000559108 SH3PXD2AQ5TCZ1 1133 aa11.4□□□□□ -0.58
TPM1-217ENST00000559108 TRIM68Q6AZZ1 485 aa11.4□□□□□ -0.58
TPM1-217ENST00000559108 MIB1Q86YT6 1006 aa11.4□□□□□ -0.58
TPM1-217ENST00000559108 ZNF276Q8N554 614 aa11.4□□□□□ -0.58
TPM1-217ENST00000559108 ZNF397Q8NF99 534 aaPredicted RBP11.4□□□□□ -0.58
TPM1-217ENST00000559108 ELSPBP1Q96BH3 223 aa11.4□□□□□ -0.58
TPM1-217ENST00000559108 ACSF2Q96CM8 615 aaPredicted RBP11.4□□□□□ -0.58
TPM1-217ENST00000559108 ARHGEF26Q96DR7 871 aa11.4□□□□□ -0.58
TPM1-217ENST00000559108 NUCKS1Q9H1E3 243 aaKnown RBP11.4□□□□□ -0.58
TPM1-217ENST00000559108 ISCUQ9H1K1 167 aa11.4□□□□□ -0.58
TPM1-217ENST00000559108 HPS4Q9NQG7 708 aa11.4□□□□□ -0.58
TPM1-217ENST00000559108 METTL5Q9NRN9 209 aaKnown RBP11.4□□□□□ -0.58
TPM1-217ENST00000559108 TDP1Q9NUW8 608 aa11.4□□□□□ -0.58
TPM1-217ENST00000559108 CFAP97Q9P2B7 532 aa11.4□□□□□ -0.58
TPM1-217ENST00000559108 RASAL2Q9UJF2 1139 aa11.4□□□□□ -0.58
TPM1-217ENST00000559108 TFR2Q9UP52 801 aa11.4□□□□□ -0.58
TPM1-217ENST00000559108 WNT6Q9Y6F9 365 aa11.4□□□□□ -0.58
TPM1-217ENST00000559108 ZFP37Q9Y6Q3 630 aaPredicted RBP11.4□□□□□ -0.58
TPM1-217ENST00000559108 TECTAO75443 2155 aa11.4□□□□□ -0.59
TPM1-217ENST00000559108 A0A0U1RQJ8 604 aa11.39□□□□□ -0.59
TPM1-217ENST00000559108 SOWAHDA6NJG2 315 aa11.39□□□□□ -0.59
TPM1-217ENST00000559108 SOBPA7XYQ1 873 aa11.39□□□□□ -0.59
TPM1-217ENST00000559108 TRIOO75962 3097 aa11.39□□□□□ -0.59
TPM1-217ENST00000559108 STC2O76061 302 aa11.39□□□□□ -0.59
TPM1-217ENST00000559108 IGLV3-27P01718 113 aa11.39□□□□□ -0.59
TPM1-217ENST00000559108 FTLP02792 175 aaPredicted RBP11.39□□□□□ -0.59
TPM1-217ENST00000559108 HMBSP08397 361 aa11.39□□□□□ -0.59
TPM1-217ENST00000559108 IRF1P10914 325 aa11.39□□□□□ -0.59
TPM1-217ENST00000559108 ARSAP15289 507 aa11.39□□□□□ -0.59
TPM1-217ENST00000559108 ATP5C1P36542 298 aaKnown RBP11.39□□□□□ -0.59
TPM1-217ENST00000559108 AVPR1AP37288 418 aa11.39□□□□□ -0.59
TPM1-217ENST00000559108 NSFP46459 744 aaKnown RBP11.39□□□□□ -0.59
TPM1-217ENST00000559108 PSEN1P49768 467 aa11.39□□□□□ -0.59
TPM1-217ENST00000559108 GSCP56915 257 aaPredicted RBP11.39□□□□□ -0.59
TPM1-217ENST00000559108 RPL7AP62424 266 aaKnown RBP11.39□□□□□ -0.59
TPM1-217ENST00000559108 YWHAZP63104 245 aaKnown RBP11.39□□□□□ -0.59
TPM1-217ENST00000559108 GPC5P78333 572 aa11.39□□□□□ -0.59
TPM1-217ENST00000559108 C1QBPQ07021 282 aaKnown RBP11.39□□□□□ -0.59
TPM1-217ENST00000559108 ZNF268Q14587 947 aaPredicted RBP11.39□□□□□ -0.59
TPM1-217ENST00000559108 GAB4Q2WGN9 574 aa11.39□□□□□ -0.59
TPM1-217ENST00000559108 ARTNQ5T4W7 220 aa11.39□□□□□ -0.59
TPM1-217ENST00000559108 BTBD8Q5XKL5 378 aa11.39□□□□□ -0.59
TPM1-217ENST00000559108 NAIF1Q69YI7 327 aaPredicted RBP11.39□□□□□ -0.59
TPM1-217ENST00000559108 KLHDC10Q6PID8 442 aa11.39□□□□□ -0.59
TPM1-217ENST00000559108 RAD9BQ6WBX8 426 aa11.39□□□□□ -0.59
TPM1-217ENST00000559108 BNIPLQ7Z465 357 aa11.39□□□□□ -0.59
TPM1-217ENST00000559108 CPNE8Q86YQ8 564 aa11.39□□□□□ -0.59
TPM1-217ENST00000559108 CNGA4Q8IV77 575 aa11.39□□□□□ -0.59
TPM1-217ENST00000559108 FMNL3Q8IVF7 1028 aa11.39□□□□□ -0.59
TPM1-217ENST00000559108 DRC7Q8IY82 874 aa11.39□□□□□ -0.59
TPM1-217ENST00000559108 PLCD3Q8N3E9 789 aa11.39□□□□□ -0.59
TPM1-217ENST00000559108 CELF5Q8N6W0 485 aaKnown RBP11.39□□□□□ -0.59
TPM1-217ENST00000559108 TTC16Q8NEE8 873 aa11.39□□□□□ -0.59
TPM1-217ENST00000559108 IPO4Q8TEX9 1081 aaKnown RBP11.39□□□□□ -0.59
TPM1-217ENST00000559108 ATRIPQ8WXE1 791 aa11.39□□□□□ -0.59
TPM1-217ENST00000559108 FAM149B1Q96BN6 582 aa11.39□□□□□ -0.59
TPM1-217ENST00000559108 MYEOVQ96EZ4 313 aa11.39□□□□□ -0.59
TPM1-217ENST00000559108 NOX5Q96PH1 765 aa11.39□□□□□ -0.59
TPM1-217ENST00000559108 NPY6RQ99463 290 aa11.39□□□□□ -0.59
TPM1-217ENST00000559108 LINC00597Q9H2U6 94 aa11.39□□□□□ -0.59
TPM1-217ENST00000559108 SYNCQ9H7C4 482 aa11.39□□□□□ -0.59
TPM1-217ENST00000559108 NHEJ1Q9H9Q4 299 aaPredicted RBP11.39□□□□□ -0.59
TPM1-217ENST00000559108 ZFP14Q9HCL3 533 aa11.39□□□□□ -0.59
TPM1-217ENST00000559108 ABCC13Q9NSE7 274 aa11.39□□□□□ -0.59
TPM1-217ENST00000559108 ASNSD1Q9NWL6 643 aa11.39□□□□□ -0.59
TPM1-217ENST00000559108 ADAM22Q9P0K1 906 aa11.39□□□□□ -0.59
TPM1-217ENST00000559108 MARCH2Q9P0N8 246 aa11.39□□□□□ -0.59
TPM1-217ENST00000559108 XPO7Q9UIA9 1087 aaKnown RBP11.39□□□□□ -0.59
TPM1-217ENST00000559108 REXO2Q9Y3B8 237 aaKnown RBP11.39□□□□□ -0.59
TPM1-217ENST00000559108 CEP83Q9Y592 693 aa11.39□□□□□ -0.59
TPM1-217ENST00000559108 SSU72P8A0A1W2PR75 194 aa11.38□□□□□ -0.59
TPM1-217ENST00000559108 SLC12A8A0AV02 714 aa11.38□□□□□ -0.59
TPM1-217ENST00000559108 CCDC172P0C7W6 258 aa11.38□□□□□ -0.59
TPM1-217ENST00000559108 GZMAP12544 262 aa11.38□□□□□ -0.59
TPM1-217ENST00000559108 NCAM1P13591 858 aa11.38□□□□□ -0.59
TPM1-217ENST00000559108 TCF3P15923 654 aa11.38□□□□□ -0.59
TPM1-217ENST00000559108 PFKLP17858 780 aa11.38□□□□□ -0.59
TPM1-217ENST00000559108 RFC1P35251 1148 aaPredicted RBP11.38□□□□□ -0.59
TPM1-217ENST00000559108 SCNN1AP37088 669 aa11.38□□□□□ -0.59
TPM1-217ENST00000559108 RNASE9P60153 205 aaKnown RBP11.38□□□□□ -0.59
TPM1-217ENST00000559108 CDK17Q00537 523 aa11.38□□□□□ -0.59
TPM1-217ENST00000559108 SLC18A3Q16572 532 aa11.38□□□□□ -0.59
TPM1-217ENST00000559108 DCAF6Q58WW2 860 aa11.38□□□□□ -0.59
TPM1-217ENST00000559108 Q6ZNB5 142 aa11.38□□□□□ -0.59
TPM1-217ENST00000559108 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.38□□□□□ -0.59
TPM1-217ENST00000559108 MFSD6LQ8IWD5 586 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms