RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 CYLDQ9NQC7 956 aa12.15□□□□□ -0.46
CASC4-205ENST00000558735 RAB20Q9NX57 234 aa12.15□□□□□ -0.46
CASC4-205ENST00000558735 EVLQ9UI08 416 aaPredicted RBP12.15□□□□□ -0.46
CASC4-205ENST00000558735 NUDT5Q9UKK9 219 aa12.15□□□□□ -0.46
CASC4-205ENST00000558735 HCN2Q9UL51 889 aa12.15□□□□□ -0.46
CASC4-205ENST00000558735 HELZP42694 1942 aaKnown RBP12.15□□□□□ -0.46
CASC4-205ENST00000558735 A0A1W2PQH9 124 aa12.14□□□□□ -0.47
CASC4-205ENST00000558735 FAM221BA6H8Z2 402 aa12.14□□□□□ -0.47
CASC4-205ENST00000558735 TBC1D3BA6NDS4 549 aa12.14□□□□□ -0.47
CASC4-205ENST00000558735 UPK3BL1B0FP48 263 aa12.14□□□□□ -0.47
CASC4-205ENST00000558735 UPK3BL2E5RIL1 263 aa12.14□□□□□ -0.47
CASC4-205ENST00000558735 KHNYNO15037 678 aaKnown RBP12.14□□□□□ -0.47
CASC4-205ENST00000558735 CETN3O15182 167 aa12.14□□□□□ -0.47
CASC4-205ENST00000558735 CYP26A1O43174 497 aa12.14□□□□□ -0.47
CASC4-205ENST00000558735 RARGP13631 454 aa12.14□□□□□ -0.47
CASC4-205ENST00000558735 KDSRQ06136 332 aa12.14□□□□□ -0.47
CASC4-205ENST00000558735 ANO4Q32M45 955 aa12.14□□□□□ -0.47
CASC4-205ENST00000558735 HSF5Q4G112 596 aaPredicted RBP12.14□□□□□ -0.47
CASC4-205ENST00000558735 BTBD8Q5XKL5 378 aa12.14□□□□□ -0.47
CASC4-205ENST00000558735 ZNF276Q8N554 614 aa12.14□□□□□ -0.47
CASC4-205ENST00000558735 FRMD1Q8N878 549 aa12.14□□□□□ -0.47
CASC4-205ENST00000558735 SLC4A11Q8NBS3 891 aa12.14□□□□□ -0.47
CASC4-205ENST00000558735 ENGASEQ8NFI3 743 aa12.14□□□□□ -0.47
CASC4-205ENST00000558735 MDGA1Q8NFP4 955 aa12.14□□□□□ -0.47
CASC4-205ENST00000558735 OLIG1Q8TAK6 271 aa12.14□□□□□ -0.47
CASC4-205ENST00000558735 FAXDC2Q96IV6 333 aa12.14□□□□□ -0.47
CASC4-205ENST00000558735 CNOT6LQ96LI5 555 aaKnown RBP12.14□□□□□ -0.47
CASC4-205ENST00000558735 NACA2Q9H009 215 aa12.14□□□□□ -0.47
CASC4-205ENST00000558735 PNPLA8Q9NP80 782 aa12.14□□□□□ -0.47
CASC4-205ENST00000558735 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.14□□□□□ -0.47
CASC4-205ENST00000558735 DEC1Q9P2X7 70 aa12.14□□□□□ -0.47
CASC4-205ENST00000558735 USP3Q9Y6I4 520 aa12.14□□□□□ -0.47
CASC4-205ENST00000558735 MYO18AQ92614 2054 aaKnown RBP12.14□□□□□ -0.47
CASC4-205ENST00000558735 GCN1Q92616 2671 aaKnown RBP12.13□□□□□ -0.47
CASC4-205ENST00000558735 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.13□□□□□ -0.47
CASC4-205ENST00000558735 MDM4O15151 490 aa12.13□□□□□ -0.47
CASC4-205ENST00000558735 TOP3BO95985 862 aaKnown RBP12.13□□□□□ -0.47
CASC4-205ENST00000558735 TRIM21P19474 475 aaKnown RBP12.13□□□□□ -0.47
CASC4-205ENST00000558735 SPINK2P20155 84 aa12.13□□□□□ -0.47
CASC4-205ENST00000558735 BCKDHBP21953 392 aa12.13□□□□□ -0.47
CASC4-205ENST00000558735 GBP1P32455 592 aa12.13□□□□□ -0.47
CASC4-205ENST00000558735 PLA2G4AP47712 749 aa12.13□□□□□ -0.47
CASC4-205ENST00000558735 PMS1P54277 932 aaKnown RBP12.13□□□□□ -0.47
CASC4-205ENST00000558735 RAD23BP54727 409 aa12.13□□□□□ -0.47
CASC4-205ENST00000558735 RING1Q06587 406 aa12.13□□□□□ -0.47
CASC4-205ENST00000558735 EOGTQ5NDL2 527 aa12.13□□□□□ -0.47
CASC4-205ENST00000558735 ZNF658Q5TYW1 1059 aaPredicted RBP12.13□□□□□ -0.47
CASC4-205ENST00000558735 ANKRD40Q6AI12 368 aa12.13□□□□□ -0.47
CASC4-205ENST00000558735 KLHDC10Q6PID8 442 aa12.13□□□□□ -0.47
CASC4-205ENST00000558735 TTC30AQ86WT1 665 aa12.13□□□□□ -0.47
CASC4-205ENST00000558735 CCDC150Q8NCX0 1101 aa12.13□□□□□ -0.47
CASC4-205ENST00000558735 FBXL13Q8NEE6 735 aa12.13□□□□□ -0.47
CASC4-205ENST00000558735 SPATA20Q8TB22 786 aa12.13□□□□□ -0.47
CASC4-205ENST00000558735 KCNV2Q8TDN2 545 aa12.13□□□□□ -0.47
CASC4-205ENST00000558735 RLN3Q8WXF3 142 aa12.13□□□□□ -0.47
CASC4-205ENST00000558735 ZCCHC14Q8WYQ9 949 aaKnown RBP12.13□□□□□ -0.47
CASC4-205ENST00000558735 ERCC4Q92889 916 aaPredicted RBP12.13□□□□□ -0.47
CASC4-205ENST00000558735 P2RY11Q96G91 374 aa12.13□□□□□ -0.47
CASC4-205ENST00000558735 TMEM176AQ96HP8 235 aa12.13□□□□□ -0.47
CASC4-205ENST00000558735 CISHQ9NSE2 258 aa12.13□□□□□ -0.47
CASC4-205ENST00000558735 DNMT3LQ9UJW3 386 aa12.13□□□□□ -0.47
CASC4-205ENST00000558735 COQ4Q9Y3A0 265 aa12.13□□□□□ -0.47
CASC4-205ENST00000558735 MSRB2Q9Y3D2 182 aa12.13□□□□□ -0.47
CASC4-205ENST00000558735 STARD13Q9Y3M8 1113 aa12.13□□□□□ -0.47
CASC4-205ENST00000558735 PCDHA5Q9Y5H7 936 aa12.13□□□□□ -0.47
CASC4-205ENST00000558735 LAMA5O15230 3695 aa12.13□□□□□ -0.47
CASC4-205ENST00000558735 MYO16Q9Y6X6 1858 aa12.12□□□□□ -0.47
CASC4-205ENST00000558735 ALDH1A2O94788 518 aa12.12□□□□□ -0.47
CASC4-205ENST00000558735 KLKB1P03952 638 aa12.12□□□□□ -0.47
CASC4-205ENST00000558735 CAPNS1P04632 268 aa12.12□□□□□ -0.47
CASC4-205ENST00000558735 CISD3P0C7P0 127 aa12.12□□□□□ -0.47
CASC4-205ENST00000558735 EPB41P11171 864 aaKnown RBP12.12□□□□□ -0.47
CASC4-205ENST00000558735 P2RY2P41231 377 aa12.12□□□□□ -0.47
CASC4-205ENST00000558735 PSEN1P49768 467 aa12.12□□□□□ -0.47
CASC4-205ENST00000558735 CBWD6Q4V339 395 aa12.12□□□□□ -0.47
CASC4-205ENST00000558735 COBLL1Q53SF7 1204 aa12.12□□□□□ -0.47
CASC4-205ENST00000558735 CBWD3Q5JTY5 395 aa12.12□□□□□ -0.47
CASC4-205ENST00000558735 CBWD5Q5RIA9 395 aa12.12□□□□□ -0.47
CASC4-205ENST00000558735 C10orf120Q5SQS8 335 aa12.12□□□□□ -0.47
CASC4-205ENST00000558735 Q6ZNB5 142 aa12.12□□□□□ -0.47
CASC4-205ENST00000558735 TPGS1Q6ZTW0 290 aa12.12□□□□□ -0.47
CASC4-205ENST00000558735 CCDC186Q7Z3E2 898 aa12.12□□□□□ -0.47
CASC4-205ENST00000558735 PIP4P1Q86T03 277 aa12.12□□□□□ -0.47
CASC4-205ENST00000558735 MIB1Q86YT6 1006 aa12.12□□□□□ -0.47
CASC4-205ENST00000558735 ZC3H3Q8IXZ2 948 aaKnown RBP12.12□□□□□ -0.47
CASC4-205ENST00000558735 GSDMAQ96QA5 445 aa12.12□□□□□ -0.47
CASC4-205ENST00000558735 ARID3AQ99856 593 aa12.12□□□□□ -0.47
CASC4-205ENST00000558735 UBXN6Q9BZV1 441 aa12.12□□□□□ -0.47
CASC4-205ENST00000558735 POLMQ9NP87 494 aaPredicted RBP12.12□□□□□ -0.47
CASC4-205ENST00000558735 NAGPAQ9UK23 515 aa12.12□□□□□ -0.47
CASC4-205ENST00000558735 IGSF10Q6WRI0 2623 aa12.11□□□□□ -0.47
CASC4-205ENST00000558735 SETXQ7Z333 2677 aaKnown RBP12.11□□□□□ -0.47
CASC4-205ENST00000558735 MYH10P35580 1976 aa12.11□□□□□ -0.47
CASC4-205ENST00000558735 PRRT4C9JH25 899 aa12.11□□□□□ -0.47
CASC4-205ENST00000558735 TAF4O00268 1085 aa12.11□□□□□ -0.47
CASC4-205ENST00000558735 STX10O60499 249 aa12.11□□□□□ -0.47
CASC4-205ENST00000558735 STC2O76061 302 aa12.11□□□□□ -0.47
CASC4-205ENST00000558735 TYRP14679 529 aa12.11□□□□□ -0.47
CASC4-205ENST00000558735 MXI1P50539 228 aa12.11□□□□□ -0.47
CASC4-205ENST00000558735 IRX4P78413 519 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms