RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 MAN2B1O00754 1011 aa12.93□□□□□ -0.34
SMAD3-205ENST00000558428 NFATC1O95644 943 aa12.93□□□□□ -0.34
SMAD3-205ENST00000558428 TPM3P06753 285 aa12.93□□□□□ -0.34
SMAD3-205ENST00000558428 HMBSP08397 361 aa12.93□□□□□ -0.34
SMAD3-205ENST00000558428 CTHP32929 405 aa12.93□□□□□ -0.34
SMAD3-205ENST00000558428 CDH5P33151 784 aaPredicted RBP12.93□□□□□ -0.34
SMAD3-205ENST00000558428 CLCN5P51795 746 aa12.93□□□□□ -0.34
SMAD3-205ENST00000558428 VCPP55072 806 aaKnown RBP12.93□□□□□ -0.34
SMAD3-205ENST00000558428 SNX16P57768 344 aa12.93□□□□□ -0.34
SMAD3-205ENST00000558428 COG7P83436 770 aa12.93□□□□□ -0.34
SMAD3-205ENST00000558428 CDR2Q01850 454 aa12.93□□□□□ -0.34
SMAD3-205ENST00000558428 PTPN20Q4JDL3 420 aa12.93□□□□□ -0.34
SMAD3-205ENST00000558428 ZNF852Q6ZMS4 543 aa12.93□□□□□ -0.34
SMAD3-205ENST00000558428 FAM3CQ92520 227 aa12.93□□□□□ -0.34
SMAD3-205ENST00000558428 BAP1Q92560 729 aa12.93□□□□□ -0.34
SMAD3-205ENST00000558428 WBP2Q969T9 261 aa12.93□□□□□ -0.34
SMAD3-205ENST00000558428 MSANTD3Q96H12 275 aa12.93□□□□□ -0.34
SMAD3-205ENST00000558428 DDX23Q9BUQ8 820 aaKnown RBP12.93□□□□□ -0.34
SMAD3-205ENST00000558428 LTB4R2Q9NPC1 389 aa12.93□□□□□ -0.34
SMAD3-205ENST00000558428 TBC1D14Q9P2M4 693 aa12.93□□□□□ -0.34
SMAD3-205ENST00000558428 SFMBT1Q9UHJ3 866 aa12.93□□□□□ -0.34
SMAD3-205ENST00000558428 MYO6Q9UM54 1294 aa12.93□□□□□ -0.34
SMAD3-205ENST00000558428 MRPS17Q9Y2R5 130 aaKnown RBP12.93□□□□□ -0.34
SMAD3-205ENST00000558428 KMT2EQ8IZD2 1858 aa12.93□□□□□ -0.34
SMAD3-205ENST00000558428 ATG2BQ96BY7 2078 aa12.92□□□□□ -0.34
SMAD3-205ENST00000558428 SHISA7A6NL88 538 aa12.92□□□□□ -0.34
SMAD3-205ENST00000558428 LRRC53A6NM62 1247 aa12.92□□□□□ -0.34
SMAD3-205ENST00000558428 PI15O43692 258 aa12.92□□□□□ -0.34
SMAD3-205ENST00000558428 STC2O76061 302 aa12.92□□□□□ -0.34
SMAD3-205ENST00000558428 LSM8O95777 96 aaKnown RBP12.92□□□□□ -0.34
SMAD3-205ENST00000558428 ERBB2P04626 1255 aa12.92□□□□□ -0.34
SMAD3-205ENST00000558428 CCDC172P0C7W6 258 aa12.92□□□□□ -0.34
SMAD3-205ENST00000558428 NCAM1P13591 858 aa12.92□□□□□ -0.34
SMAD3-205ENST00000558428 FERP16591 822 aa12.92□□□□□ -0.34
SMAD3-205ENST00000558428 AOC1P19801 751 aa12.92□□□□□ -0.34
SMAD3-205ENST00000558428 PBX1P40424 430 aa12.92□□□□□ -0.34
SMAD3-205ENST00000558428 MLLT6P55198 1093 aaPredicted RBP12.92□□□□□ -0.34
SMAD3-205ENST00000558428 FMO1Q01740 532 aa12.92□□□□□ -0.34
SMAD3-205ENST00000558428 NR1H3Q13133 447 aa12.92□□□□□ -0.34
SMAD3-205ENST00000558428 NAA35Q5VZE5 725 aa12.92□□□□□ -0.34
SMAD3-205ENST00000558428 OR6B2Q6IFH4 312 aa12.92□□□□□ -0.34
SMAD3-205ENST00000558428 C1orf228Q6PIY5 440 aa12.92□□□□□ -0.34
SMAD3-205ENST00000558428 FAM183BPQ6ZVS7 135 aa12.92□□□□□ -0.34
SMAD3-205ENST00000558428 HTR3DQ70Z44 454 aa12.92□□□□□ -0.34
SMAD3-205ENST00000558428 RALGPS2Q86X27 583 aaPredicted RBP12.92□□□□□ -0.34
SMAD3-205ENST00000558428 FMNL3Q8IVF7 1028 aa12.92□□□□□ -0.34
SMAD3-205ENST00000558428 BBS7Q8IWZ6 715 aa12.92□□□□□ -0.34
SMAD3-205ENST00000558428 TMEM105Q8N8V8 129 aa12.92□□□□□ -0.34
SMAD3-205ENST00000558428 MSANTD4Q8NCY6 345 aa12.92□□□□□ -0.34
SMAD3-205ENST00000558428 PJA1Q8NG27 643 aa12.92□□□□□ -0.34
SMAD3-205ENST00000558428 OTUB2Q96DC9 234 aa12.92□□□□□ -0.34
SMAD3-205ENST00000558428 TRIM62Q9BVG3 475 aa12.92□□□□□ -0.34
SMAD3-205ENST00000558428 NUP58Q9BVL2 599 aa12.92□□□□□ -0.34
SMAD3-205ENST00000558428 XPO4Q9C0E2 1151 aaKnown RBP12.92□□□□□ -0.34
SMAD3-205ENST00000558428 TTYH3Q9C0H2 523 aa12.92□□□□□ -0.34
SMAD3-205ENST00000558428 NDRG2Q9UN36 371 aaKnown RBP12.92□□□□□ -0.34
SMAD3-205ENST00000558428 SIT1Q9Y3P8 196 aa12.92□□□□□ -0.34
SMAD3-205ENST00000558428 WDFY4Q6ZS81 3184 aa12.91□□□□□ -0.34
SMAD3-205ENST00000558428 FAM170BA6NMN3 283 aa12.91□□□□□ -0.34
SMAD3-205ENST00000558428 CAPN9O14815 690 aa12.91□□□□□ -0.34
SMAD3-205ENST00000558428 CBFA2T2O43439 604 aa12.91□□□□□ -0.34
SMAD3-205ENST00000558428 GREM1O60565 184 aa12.91□□□□□ -0.34
SMAD3-205ENST00000558428 FYNP06241 537 aa12.91□□□□□ -0.34
SMAD3-205ENST00000558428 CHRNB2P17787 502 aa12.91□□□□□ -0.34
SMAD3-205ENST00000558428 TARSP26639 723 aaKnown RBP12.91□□□□□ -0.34
SMAD3-205ENST00000558428 AVPR2P30518 371 aa12.91□□□□□ -0.34
SMAD3-205ENST00000558428 GJA4P35212 333 aa12.91□□□□□ -0.34
SMAD3-205ENST00000558428 NOMO3P69849 1222 aa12.91□□□□□ -0.34
SMAD3-205ENST00000558428 AMPD2Q01433 879 aa12.91□□□□□ -0.34
SMAD3-205ENST00000558428 DHCR24Q15392 516 aa12.91□□□□□ -0.34
SMAD3-205ENST00000558428 FIGNQ5HY92 759 aa12.91□□□□□ -0.34
SMAD3-205ENST00000558428 MSANTD2Q6P1R3 559 aa12.91□□□□□ -0.34
SMAD3-205ENST00000558428 TXNDC11Q6PKC3 985 aa12.91□□□□□ -0.34
SMAD3-205ENST00000558428 TRIM72Q6ZMU5 477 aa12.91□□□□□ -0.34
SMAD3-205ENST00000558428 ERICH1Q86X53 443 aa12.91□□□□□ -0.34
SMAD3-205ENST00000558428 ADGRG2Q8IZP9 1017 aa12.91□□□□□ -0.34
SMAD3-205ENST00000558428 CPA5Q8WXQ8 436 aa12.91□□□□□ -0.34
SMAD3-205ENST00000558428 C18orf8Q96DM3 657 aa12.91□□□□□ -0.34
SMAD3-205ENST00000558428 PIWIL1Q96J94 861 aaKnown RBP12.91□□□□□ -0.34
SMAD3-205ENST00000558428 NELL2Q99435 816 aa12.91□□□□□ -0.34
SMAD3-205ENST00000558428 EDEM3Q9BZQ6 932 aa12.91□□□□□ -0.34
SMAD3-205ENST00000558428 DCLK3Q9C098 648 aa12.91□□□□□ -0.34
SMAD3-205ENST00000558428 POPDC2Q9HBU9 364 aa12.91□□□□□ -0.34
SMAD3-205ENST00000558428 SEPT11Q9NVA2 429 aaKnown RBP12.91□□□□□ -0.34
SMAD3-205ENST00000558428 NAALADL1Q9UQQ1 740 aa12.91□□□□□ -0.34
SMAD3-205ENST00000558428 HBS1LQ9Y450 684 aaKnown RBP12.91□□□□□ -0.34
SMAD3-205ENST00000558428 MTF2Q9Y483 593 aaPredicted RBP12.91□□□□□ -0.34
SMAD3-205ENST00000558428 MSI1O43347 362 aaKnown RBP12.9□□□□□ -0.34
SMAD3-205ENST00000558428 GRAP2O75791 330 aa12.9□□□□□ -0.34
SMAD3-205ENST00000558428 ADH1CP00326 375 aa12.9□□□□□ -0.34
SMAD3-205ENST00000558428 CYP1A1P04798 512 aaPredicted RBP12.9□□□□□ -0.34
SMAD3-205ENST00000558428 CYP17A1P05093 508 aa12.9□□□□□ -0.34
SMAD3-205ENST00000558428 DCNP07585 359 aaKnown RBP12.9□□□□□ -0.34
SMAD3-205ENST00000558428 GLI1P08151 1106 aa12.9□□□□□ -0.34
SMAD3-205ENST00000558428 CORO1AP31146 461 aaKnown RBP12.9□□□□□ -0.34
SMAD3-205ENST00000558428 YWHAZP63104 245 aaKnown RBP12.9□□□□□ -0.34
SMAD3-205ENST00000558428 PON2Q15165 354 aa12.9□□□□□ -0.34
SMAD3-205ENST00000558428 TAF5Q15542 800 aa12.9□□□□□ -0.34
SMAD3-205ENST00000558428 ASIC2Q16515 512 aa12.9□□□□□ -0.34
SMAD3-205ENST00000558428 EFHC1Q5JVL4 640 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms