RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 GRAMD1AQ96CP6 724 aa3.98□□□□□ -1.77
SPG11-206ENST00000558093 SELENOOQ9BVL4 669 aa3.98□□□□□ -1.77
SPG11-206ENST00000558093 COLEC11Q9BWP8 271 aa3.98□□□□□ -1.77
SPG11-206ENST00000558093 GJB4Q9NTQ9 266 aa3.98□□□□□ -1.77
SPG11-206ENST00000558093 MYO1AQ9UBC5 1043 aa3.98□□□□□ -1.77
SPG11-206ENST00000558093 A0A087WZ62 844 aa3.97□□□□□ -1.77
SPG11-206ENST00000558093 CLIC1O00299 241 aa3.97□□□□□ -1.77
SPG11-206ENST00000558093 ADAMTS3O15072 1205 aa3.97□□□□□ -1.77
SPG11-206ENST00000558093 FYB1O15117 783 aa3.97□□□□□ -1.77
SPG11-206ENST00000558093 ZSCAN9O15535 394 aaPredicted RBP3.97□□□□□ -1.77
SPG11-206ENST00000558093 NDST3O95803 873 aa3.97□□□□□ -1.77
SPG11-206ENST00000558093 TNFSF4P23510 183 aa3.97□□□□□ -1.77
SPG11-206ENST00000558093 MST1P26927 711 aa3.97□□□□□ -1.77
SPG11-206ENST00000558093 HTR7P34969 479 aa3.97□□□□□ -1.77
SPG11-206ENST00000558093 DGKQP52824 942 aa3.97□□□□□ -1.77
SPG11-206ENST00000558093 GHRHRQ02643 423 aa3.97□□□□□ -1.77
SPG11-206ENST00000558093 CFHR3Q02985 330 aa3.97□□□□□ -1.77
SPG11-206ENST00000558093 BFSP2Q13515 415 aa3.97□□□□□ -1.77
SPG11-206ENST00000558093 P3H1Q32P28 736 aa3.97□□□□□ -1.77
SPG11-206ENST00000558093 ARL13BQ3SXY8 428 aa3.97□□□□□ -1.77
SPG11-206ENST00000558093 CCDC181Q5TID7 509 aa3.97□□□□□ -1.77
SPG11-206ENST00000558093 ABLIM2Q6H8Q1 611 aa3.97□□□□□ -1.77
SPG11-206ENST00000558093 ZNF813Q6ZN06 617 aa3.97□□□□□ -1.77
SPG11-206ENST00000558093 CCDC28AQ8IWP9 274 aa3.97□□□□□ -1.77
SPG11-206ENST00000558093 RNF152Q8N8N0 203 aa3.97□□□□□ -1.77
SPG11-206ENST00000558093 PRSS3P2Q8NHM4 247 aa3.97□□□□□ -1.77
SPG11-206ENST00000558093 RPL36ALQ969Q0 106 aaKnown RBP3.97□□□□□ -1.77
SPG11-206ENST00000558093 HIC2Q96JB3 615 aa3.97□□□□□ -1.77
SPG11-206ENST00000558093 SNX27Q96L92 541 aa3.97□□□□□ -1.77
SPG11-206ENST00000558093 EIF3CQ99613 913 aaKnown RBP3.97□□□□□ -1.77
SPG11-206ENST00000558093 ADGRE3Q9BY15 652 aa3.97□□□□□ -1.77
SPG11-206ENST00000558093 EIF2AQ9BY44 585 aaKnown RBP3.97□□□□□ -1.77
SPG11-206ENST00000558093 PCDHAC1Q9H158 963 aa3.97□□□□□ -1.77
SPG11-206ENST00000558093 ARL8BQ9NVJ2 186 aa3.97□□□□□ -1.77
SPG11-206ENST00000558093 MAN2B2Q9Y2E5 1009 aa3.97□□□□□ -1.77
SPG11-206ENST00000558093 TNFRSF18Q9Y5U5 241 aa3.97□□□□□ -1.77
SPG11-206ENST00000558093 COL15A1P39059 1388 aa3.97□□□□□ -1.77
SPG11-206ENST00000558093 ANO9A1A5B4 782 aa3.96□□□□□ -1.78
SPG11-206ENST00000558093 RASA4BC9J798 803 aa3.96□□□□□ -1.78
SPG11-206ENST00000558093 RASA4O43374 803 aa3.96□□□□□ -1.78
SPG11-206ENST00000558093 SLC3A2P08195 630 aaKnown RBP3.96□□□□□ -1.78
SPG11-206ENST00000558093 TMIGD3P0DMS9 266 aaPredicted RBP3.96□□□□□ -1.78
SPG11-206ENST00000558093 ARP10275 920 aa3.96□□□□□ -1.78
SPG11-206ENST00000558093 HARSP12081 509 aaKnown RBP3.96□□□□□ -1.78
SPG11-206ENST00000558093 TACR3P29371 465 aa3.96□□□□□ -1.78
SPG11-206ENST00000558093 PLCD1P51178 756 aa3.96□□□□□ -1.78
SPG11-206ENST00000558093 JAK3P52333 1124 aa3.96□□□□□ -1.78
SPG11-206ENST00000558093 TBX4P57082 545 aa3.96□□□□□ -1.78
SPG11-206ENST00000558093 GPC5P78333 572 aa3.96□□□□□ -1.78
SPG11-206ENST00000558093 KLF9Q13886 244 aaPredicted RBP3.96□□□□□ -1.78
SPG11-206ENST00000558093 ETFDHQ16134 617 aa3.96□□□□□ -1.78
SPG11-206ENST00000558093 PFKFB3Q16875 520 aaPredicted RBP3.96□□□□□ -1.78
SPG11-206ENST00000558093 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.96□□□□□ -1.78
SPG11-206ENST00000558093 FAM209BQ5JX69 171 aa3.96□□□□□ -1.78
SPG11-206ENST00000558093 GRHL2Q6ISB3 625 aa3.96□□□□□ -1.78
SPG11-206ENST00000558093 ANO7Q6IWH7 933 aa3.96□□□□□ -1.78
SPG11-206ENST00000558093 HIBCHQ6NVY1 386 aaPredicted RBP3.96□□□□□ -1.78
SPG11-206ENST00000558093 RANBP10Q6VN20 620 aa3.96□□□□□ -1.78
SPG11-206ENST00000558093 DPP9Q86TI2 863 aa3.96□□□□□ -1.78
SPG11-206ENST00000558093 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.96□□□□□ -1.78
SPG11-206ENST00000558093 SUN3Q8TAQ9 357 aa3.96□□□□□ -1.78
SPG11-206ENST00000558093 ZNF566Q969W8 418 aa3.96□□□□□ -1.78
SPG11-206ENST00000558093 EDC3Q96F86 508 aaKnown RBP3.96□□□□□ -1.78
SPG11-206ENST00000558093 TNIP3Q96KP6 325 aa3.96□□□□□ -1.78
SPG11-206ENST00000558093 RIPOR3Q96MK2 946 aa3.96□□□□□ -1.78
SPG11-206ENST00000558093 ZNF778Q96MU6 729 aa3.96□□□□□ -1.78
SPG11-206ENST00000558093 NAA15Q9BXJ9 866 aaKnown RBP3.96□□□□□ -1.78
SPG11-206ENST00000558093 PRSS22Q9GZN4 317 aa3.96□□□□□ -1.78
SPG11-206ENST00000558093 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.96□□□□□ -1.78
SPG11-206ENST00000558093 CERS4Q9HA82 394 aa3.96□□□□□ -1.78
SPG11-206ENST00000558093 PI4KBQ9UBF8 816 aa3.96□□□□□ -1.78
SPG11-206ENST00000558093 ZMYND8Q9ULU4 1186 aaPredicted RBP3.96□□□□□ -1.78
SPG11-206ENST00000558093 VPS4AQ9UN37 437 aa3.96□□□□□ -1.78
SPG11-206ENST00000558093 SCAF8Q9UPN6 1271 aaKnown RBP3.96□□□□□ -1.78
SPG11-206ENST00000558093 SETD1BQ9UPS6 1966 aaKnown RBP3.95□□□□□ -1.78
SPG11-206ENST00000558093 H3BNC9 293 aa3.95□□□□□ -1.78
SPG11-206ENST00000558093 PODXLO00592 558 aa3.95□□□□□ -1.78
SPG11-206ENST00000558093 NCK2O43639 380 aa3.95□□□□□ -1.78
SPG11-206ENST00000558093 PLIN1O60240 522 aa3.95□□□□□ -1.78
SPG11-206ENST00000558093 PRAMEF2O60811 474 aa3.95□□□□□ -1.78
SPG11-206ENST00000558093 BCAR3O75815 825 aa3.95□□□□□ -1.78
SPG11-206ENST00000558093 VIPP01282 170 aa3.95□□□□□ -1.78
SPG11-206ENST00000558093 SLC5A2P31639 672 aa3.95□□□□□ -1.78
SPG11-206ENST00000558093 GALNSP34059 522 aa3.95□□□□□ -1.78
SPG11-206ENST00000558093 PBX1P40424 430 aa3.95□□□□□ -1.78
SPG11-206ENST00000558093 GSTM5P46439 218 aa3.95□□□□□ -1.78
SPG11-206ENST00000558093 AK2P54819 239 aa3.95□□□□□ -1.78
SPG11-206ENST00000558093 RAE1P78406 368 aaKnown RBP3.95□□□□□ -1.78
SPG11-206ENST00000558093 SLC14A1Q13336 389 aa3.95□□□□□ -1.78
SPG11-206ENST00000558093 KPNB1Q14974 876 aaKnown RBP3.95□□□□□ -1.78
SPG11-206ENST00000558093 ACOX1Q15067 660 aa3.95□□□□□ -1.78
SPG11-206ENST00000558093 SLC5A9Q2M3M2 681 aa3.95□□□□□ -1.78
SPG11-206ENST00000558093 ARHGAP15Q53QZ3 475 aa3.95□□□□□ -1.78
SPG11-206ENST00000558093 IL31Q6EBC2 164 aa3.95□□□□□ -1.78
SPG11-206ENST00000558093 CCSAPQ6IQ19 270 aaPredicted RBP3.95□□□□□ -1.78
SPG11-206ENST00000558093 TTC30AQ86WT1 665 aa3.95□□□□□ -1.78
SPG11-206ENST00000558093 KRT73Q86Y46 540 aa3.95□□□□□ -1.78
SPG11-206ENST00000558093 OR2C3Q8N628 320 aa3.95□□□□□ -1.78
SPG11-206ENST00000558093 PNISRQ8TF01 805 aaKnown RBP3.95□□□□□ -1.78
SPG11-206ENST00000558093 CCDC138Q96M89 665 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms