RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 MAP7D3Q8IWC1 876 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 GSDMBQ8TAX9 411 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 NCSTNQ92542 709 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 ANKRD36BP1Q96IX9 119 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 RNF157Q96PX1 679 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 C20orf27Q9GZN8 174 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 EBF3Q9H4W6 596 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 STN1Q9H668 368 aaKnown RBP12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 FER1L6Q2WGJ9 1857 aa12.24□□□□□ -0.45
VIPAS39-211ENST00000557658 PARP14Q460N5 1801 aa12.24□□□□□ -0.45
VIPAS39-211ENST00000557658 RNASEH1O60930 286 aaKnown RBP12.24□□□□□ -0.45
VIPAS39-211ENST00000557658 GPD1P21695 349 aa12.24□□□□□ -0.45
VIPAS39-211ENST00000557658 MAGEA6P43360 314 aa12.24□□□□□ -0.45
VIPAS39-211ENST00000557658 RAP1GAPP47736 663 aa12.24□□□□□ -0.45
VIPAS39-211ENST00000557658 HIRAP54198 1017 aaPredicted RBP12.24□□□□□ -0.45
VIPAS39-211ENST00000557658 CNTN2Q02246 1040 aa12.24□□□□□ -0.45
VIPAS39-211ENST00000557658 ASPHQ12797 758 aa12.24□□□□□ -0.45
VIPAS39-211ENST00000557658 MED21Q13503 144 aa12.24□□□□□ -0.45
VIPAS39-211ENST00000557658 FAM102AQ5T9C2 384 aaPredicted RBP12.24□□□□□ -0.45
VIPAS39-211ENST00000557658 ZCCHC23Q6ZST2 131 aa12.24□□□□□ -0.45
VIPAS39-211ENST00000557658 MARK2Q7KZI7 788 aaKnown RBP12.24□□□□□ -0.45
VIPAS39-211ENST00000557658 MCUQ8NE86 351 aa12.24□□□□□ -0.45
VIPAS39-211ENST00000557658 PIWIL2Q8TC59 973 aaKnown RBP12.24□□□□□ -0.45
VIPAS39-211ENST00000557658 ZNF526Q8TF50 670 aaPredicted RBP12.24□□□□□ -0.45
VIPAS39-211ENST00000557658 CNPY3Q9BT09 278 aa12.24□□□□□ -0.45
VIPAS39-211ENST00000557658 APOL6Q9BWW8 343 aa12.24□□□□□ -0.45
VIPAS39-211ENST00000557658 PLAC1Q9HBJ0 212 aa12.24□□□□□ -0.45
VIPAS39-211ENST00000557658 CPSF3Q9UKF6 684 aaKnown RBP12.24□□□□□ -0.45
VIPAS39-211ENST00000557658 APOBEC2Q9Y235 224 aaKnown RBP12.24□□□□□ -0.45
VIPAS39-211ENST00000557658 COL11A1P12107 1806 aaPredicted RBP12.24□□□□□ -0.45
VIPAS39-211ENST00000557658 FAM159BA6NKW6 160 aa12.24□□□□□ -0.45
VIPAS39-211ENST00000557658 PRPSAP2O60256 369 aa12.24□□□□□ -0.45
VIPAS39-211ENST00000557658 CCNT2O60583 730 aaKnown RBP12.24□□□□□ -0.45
VIPAS39-211ENST00000557658 MSCO60682 206 aa12.24□□□□□ -0.45
VIPAS39-211ENST00000557658 HOXC6P09630 235 aa12.24□□□□□ -0.45
VIPAS39-211ENST00000557658 TGM2P21980 687 aa12.24□□□□□ -0.45
VIPAS39-211ENST00000557658 RBL1P28749 1068 aa12.24□□□□□ -0.45
VIPAS39-211ENST00000557658 GABRB2P47870 512 aa12.24□□□□□ -0.45
VIPAS39-211ENST00000557658 XIAPP98170 497 aa12.24□□□□□ -0.45
VIPAS39-211ENST00000557658 SLC25A3Q00325 362 aa12.24□□□□□ -0.45
VIPAS39-211ENST00000557658 PDE1BQ01064 536 aa12.24□□□□□ -0.45
VIPAS39-211ENST00000557658 SLC5A9Q2M3M2 681 aa12.24□□□□□ -0.45
VIPAS39-211ENST00000557658 FASTKD1Q53R41 847 aaKnown RBP12.24□□□□□ -0.45
VIPAS39-211ENST00000557658 ZNF667Q5HYK9 610 aa12.24□□□□□ -0.45
VIPAS39-211ENST00000557658 PLD5Q8N7P1 536 aa12.24□□□□□ -0.45
VIPAS39-211ENST00000557658 DTNBP1Q96EV8 351 aa12.24□□□□□ -0.45
VIPAS39-211ENST00000557658 ACO2Q99798 780 aaKnown RBP12.24□□□□□ -0.45
VIPAS39-211ENST00000557658 NRBP2Q9NSY0 501 aa12.24□□□□□ -0.45
VIPAS39-211ENST00000557658 TRPC5Q9UL62 973 aaPredicted RBP12.24□□□□□ -0.45
VIPAS39-211ENST00000557658 MAD1L1Q9Y6D9 718 aa12.24□□□□□ -0.45
VIPAS39-211ENST00000557658 BCLAF3A2AJT9 711 aaKnown RBP12.23□□□□□ -0.45
VIPAS39-211ENST00000557658 APOL1O14791 398 aa12.23□□□□□ -0.45
VIPAS39-211ENST00000557658 CSDE1O75534 798 aaKnown RBP12.23□□□□□ -0.45
VIPAS39-211ENST00000557658 CNTFP26441 200 aa12.23□□□□□ -0.45
VIPAS39-211ENST00000557658 COPAP53621 1224 aa12.23□□□□□ -0.45
VIPAS39-211ENST00000557658 BCAR1P56945 870 aa12.23□□□□□ -0.45
VIPAS39-211ENST00000557658 SP2Q02086 613 aa12.23□□□□□ -0.45
VIPAS39-211ENST00000557658 LAMB3Q13751 1172 aa12.23□□□□□ -0.45
VIPAS39-211ENST00000557658 PDK2Q15119 407 aa12.23□□□□□ -0.45
VIPAS39-211ENST00000557658 STXBP5Q5T5C0 1151 aa12.23□□□□□ -0.45
VIPAS39-211ENST00000557658 C4orf22Q6V702 233 aa12.23□□□□□ -0.45
VIPAS39-211ENST00000557658 TIFABQ6ZNK6 161 aa12.23□□□□□ -0.45
VIPAS39-211ENST00000557658 ILDR2Q71H61 639 aa12.23□□□□□ -0.45
VIPAS39-211ENST00000557658 RNF217Q8TC41 542 aa12.23□□□□□ -0.45
VIPAS39-211ENST00000557658 DEPDC1BQ8WUY9 529 aa12.23□□□□□ -0.45
VIPAS39-211ENST00000557658 PYDC1Q8WXC3 89 aa12.23□□□□□ -0.45
VIPAS39-211ENST00000557658 JADE3Q92613 823 aa12.23□□□□□ -0.45
VIPAS39-211ENST00000557658 KLHL4Q9C0H6 718 aa12.23□□□□□ -0.45
VIPAS39-211ENST00000557658 SMYD3Q9H7B4 428 aa12.23□□□□□ -0.45
VIPAS39-211ENST00000557658 STK32BQ9NY57 414 aa12.23□□□□□ -0.45
VIPAS39-211ENST00000557658 ITGA11Q9UKX5 1188 aa12.23□□□□□ -0.45
VIPAS39-211ENST00000557658 DNAJC16Q9Y2G8 782 aa12.23□□□□□ -0.45
VIPAS39-211ENST00000557658 HEY1Q9Y5J3 304 aa12.23□□□□□ -0.45
VIPAS39-211ENST00000557658 COMMD3-BMI1R4GMX3 469 aa12.23□□□□□ -0.45
VIPAS39-211ENST00000557658 HMX2A2RU54 273 aa12.23□□□□□ -0.45
VIPAS39-211ENST00000557658 M0QYV0 167 aa12.23□□□□□ -0.45
VIPAS39-211ENST00000557658 OPHN1O60890 802 aa12.23□□□□□ -0.45
VIPAS39-211ENST00000557658 MICAL2O94851 1124 aa12.23□□□□□ -0.45
VIPAS39-211ENST00000557658 KRT19P08727 400 aa12.23□□□□□ -0.45
VIPAS39-211ENST00000557658 UQCRBP14927 111 aa12.23□□□□□ -0.45
VIPAS39-211ENST00000557658 OAZ1P54368 228 aa12.23□□□□□ -0.45
VIPAS39-211ENST00000557658 SH3BGRP55822 239 aaPredicted RBP12.23□□□□□ -0.45
VIPAS39-211ENST00000557658 PTPN11Q06124 597 aaPredicted RBP12.23□□□□□ -0.45
VIPAS39-211ENST00000557658 TUBB3Q13509 450 aa12.23□□□□□ -0.45
VIPAS39-211ENST00000557658 FAM182AQ5T1J6 154 aa12.23□□□□□ -0.45
VIPAS39-211ENST00000557658 ADGRF2Q8IZF7 708 aa12.23□□□□□ -0.45
VIPAS39-211ENST00000557658 NME8Q8N427 588 aa12.23□□□□□ -0.45
VIPAS39-211ENST00000557658 SLC26A7Q8TE54 656 aa12.23□□□□□ -0.45
VIPAS39-211ENST00000557658 PRPF31Q8WWY3 499 aaKnown RBP12.23□□□□□ -0.45
VIPAS39-211ENST00000557658 EBNA1BP2Q99848 306 aaKnown RBP12.23□□□□□ -0.45
VIPAS39-211ENST00000557658 FAM96AQ9H5X1 160 aa12.23□□□□□ -0.45
VIPAS39-211ENST00000557658 PRKCBP05771 671 aa12.22□□□□□ -0.45
VIPAS39-211ENST00000557658 PDGFRAP16234 1089 aa12.22□□□□□ -0.45
VIPAS39-211ENST00000557658 CDH8P55286 799 aa12.22□□□□□ -0.45
VIPAS39-211ENST00000557658 IRX4P78413 519 aa12.22□□□□□ -0.45
VIPAS39-211ENST00000557658 ORC1Q13415 861 aa12.22□□□□□ -0.45
VIPAS39-211ENST00000557658 TARBP2Q15633 366 aaKnown RBP12.22□□□□□ -0.45
VIPAS39-211ENST00000557658 RABGAP1LQ5R372 815 aa12.22□□□□□ -0.45
VIPAS39-211ENST00000557658 SH3PXD2AQ5TCZ1 1133 aa12.22□□□□□ -0.45
VIPAS39-211ENST00000557658 MBLAC2Q68D91 279 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms