RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 GDAP1L1Q96MZ0 367 aa12.99□□□□□ -0.33
SHMT2-233ENST00000557529 ADAM33Q9BZ11 813 aa12.99□□□□□ -0.33
SHMT2-233ENST00000557529 FBXO44Q9H4M3 255 aa12.99□□□□□ -0.33
SHMT2-233ENST00000557529 DHX35Q9H5Z1 703 aaKnown RBP12.99□□□□□ -0.33
SHMT2-233ENST00000557529 CWH43Q9H720 699 aa12.99□□□□□ -0.33
SHMT2-233ENST00000557529 GPATCH2LQ9NWQ4 482 aa12.99□□□□□ -0.33
SHMT2-233ENST00000557529 FAM53CQ9NYF3 392 aa12.99□□□□□ -0.33
SHMT2-233ENST00000557529 GRHL1Q9NZI5 618 aa12.99□□□□□ -0.33
SHMT2-233ENST00000557529 MTRF1LQ9UGC7 380 aaKnown RBP12.99□□□□□ -0.33
SHMT2-233ENST00000557529 ASIC3Q9UHC3 531 aa12.99□□□□□ -0.33
SHMT2-233ENST00000557529 DNPEPQ9ULA0 475 aa12.99□□□□□ -0.33
SHMT2-233ENST00000557529 FZD10Q9ULW2 581 aa12.99□□□□□ -0.33
SHMT2-233ENST00000557529 HPCAL4Q9UM19 191 aa12.99□□□□□ -0.33
SHMT2-233ENST00000557529 FNDC1Q4ZHG4 1894 aaPredicted RBP12.98□□□□□ -0.33
SHMT2-233ENST00000557529 NT5C1B-RDH14C9J2C7 533 aa12.98□□□□□ -0.33
SHMT2-233ENST00000557529 NDC80O14777 642 aa12.98□□□□□ -0.33
SHMT2-233ENST00000557529 MCF2LO15068 1137 aa12.98□□□□□ -0.33
SHMT2-233ENST00000557529 EFEMP2O95967 443 aa12.98□□□□□ -0.33
SHMT2-233ENST00000557529 FAM153BP0C7A2 387 aa12.98□□□□□ -0.33
SHMT2-233ENST00000557529 ATF2P15336 505 aa12.98□□□□□ -0.33
SHMT2-233ENST00000557529 ITIH2P19823 946 aa12.98□□□□□ -0.33
SHMT2-233ENST00000557529 IL4RP24394 825 aa12.98□□□□□ -0.33
SHMT2-233ENST00000557529 HSPA9P38646 679 aaKnown RBP12.98□□□□□ -0.33
SHMT2-233ENST00000557529 ARL4AP40617 200 aa12.98□□□□□ -0.33
SHMT2-233ENST00000557529 RPL21P46778 160 aaKnown RBP12.98□□□□□ -0.33
SHMT2-233ENST00000557529 OTUD4Q01804 1114 aaKnown RBP12.98□□□□□ -0.33
SHMT2-233ENST00000557529 MMRN1Q13201 1228 aa12.98□□□□□ -0.33
SHMT2-233ENST00000557529 OASLQ15646 514 aaKnown RBP12.98□□□□□ -0.33
SHMT2-233ENST00000557529 CA9Q16790 459 aa12.98□□□□□ -0.33
SHMT2-233ENST00000557529 ARL13BQ3SXY8 428 aa12.98□□□□□ -0.33
SHMT2-233ENST00000557529 FAM153CQ494X1 144 aa12.98□□□□□ -0.33
SHMT2-233ENST00000557529 PPP6R3Q5H9R7 873 aaPredicted RBP12.98□□□□□ -0.33
SHMT2-233ENST00000557529 RTP2Q5QGT7 225 aa12.98□□□□□ -0.33
SHMT2-233ENST00000557529 TMEM173Q86WV6 379 aaPredicted RBP12.98□□□□□ -0.33
SHMT2-233ENST00000557529 FAM131BQ86XD5 332 aa12.98□□□□□ -0.33
SHMT2-233ENST00000557529 KRT222Q8N1A0 295 aa12.98□□□□□ -0.33
SHMT2-233ENST00000557529 NUP93Q8N1F7 819 aa12.98□□□□□ -0.33
SHMT2-233ENST00000557529 ARHGAP18Q8N392 663 aa12.98□□□□□ -0.33
SHMT2-233ENST00000557529 ALLCQ8N6M5 410 aa12.98□□□□□ -0.33
SHMT2-233ENST00000557529 CCDC185Q8N715 623 aa12.98□□□□□ -0.33
SHMT2-233ENST00000557529 BCL7CQ8WUZ0 217 aaPredicted RBP12.98□□□□□ -0.33
SHMT2-233ENST00000557529 P3H4Q92791 437 aa12.98□□□□□ -0.33
SHMT2-233ENST00000557529 HAUS1Q96CS2 278 aa12.98□□□□□ -0.33
SHMT2-233ENST00000557529 ZNF689Q96CS4 500 aaPredicted RBP12.98□□□□□ -0.33
SHMT2-233ENST00000557529 SNF8Q96H20 258 aa12.98□□□□□ -0.33
SHMT2-233ENST00000557529 IGSF21Q96ID5 467 aa12.98□□□□□ -0.33
SHMT2-233ENST00000557529 ZNF558Q96NG5 402 aa12.98□□□□□ -0.33
SHMT2-233ENST00000557529 FMO2Q99518 471 aa12.98□□□□□ -0.33
SHMT2-233ENST00000557529 FAM118BQ9BPY3 351 aa12.98□□□□□ -0.33
SHMT2-233ENST00000557529 FAM204AQ9H8W3 233 aa12.98□□□□□ -0.33
SHMT2-233ENST00000557529 ABCC13Q9NSE7 274 aa12.98□□□□□ -0.33
SHMT2-233ENST00000557529 ZDHHC18Q9NUE0 388 aa12.98□□□□□ -0.33
SHMT2-233ENST00000557529 COMMD8Q9NX08 183 aa12.98□□□□□ -0.33
SHMT2-233ENST00000557529 FAM153AQ9UHL3 310 aa12.98□□□□□ -0.33
SHMT2-233ENST00000557529 NEU2Q9Y3R4 380 aa12.98□□□□□ -0.33
SHMT2-233ENST00000557529 BACE2Q9Y5Z0 518 aa12.98□□□□□ -0.33
SHMT2-233ENST00000557529 PTPRDP23468 1912 aa12.98□□□□□ -0.33
SHMT2-233ENST00000557529 NLRC5Q86WI3 1866 aa12.98□□□□□ -0.33
SHMT2-233ENST00000557529 H3BRJ5 948 aa12.97□□□□□ -0.33
SHMT2-233ENST00000557529 KRT14P02533 472 aa12.97□□□□□ -0.33
SHMT2-233ENST00000557529 LAG3P18627 525 aa12.97□□□□□ -0.33
SHMT2-233ENST00000557529 ITGB8P26012 769 aa12.97□□□□□ -0.33
SHMT2-233ENST00000557529 ADCY8P40145 1251 aa12.97□□□□□ -0.33
SHMT2-233ENST00000557529 PBX3P40426 434 aa12.97□□□□□ -0.33
SHMT2-233ENST00000557529 ZNF135P52742 658 aaPredicted RBP12.97□□□□□ -0.33
SHMT2-233ENST00000557529 ATXN1P54253 815 aaKnown RBP12.97□□□□□ -0.33
SHMT2-233ENST00000557529 PLTPP55058 493 aa12.97□□□□□ -0.33
SHMT2-233ENST00000557529 ARPP19P56211 112 aa12.97□□□□□ -0.33
SHMT2-233ENST00000557529 WDR5P61964 334 aaKnown RBP12.97□□□□□ -0.33
SHMT2-233ENST00000557529 YWHAGP61981 247 aaKnown RBP eCLIP12.97□□□□□ -0.33
SHMT2-233ENST00000557529 SCAPQ12770 1279 aa12.97□□□□□ -0.33
SHMT2-233ENST00000557529 NME3Q13232 169 aa12.97□□□□□ -0.33
SHMT2-233ENST00000557529 MTMR3Q13615 1198 aa12.97□□□□□ -0.33
SHMT2-233ENST00000557529 NOMO1Q15155 1222 aa12.97□□□□□ -0.33
SHMT2-233ENST00000557529 EFHC2Q5JST6 749 aa12.97□□□□□ -0.33
SHMT2-233ENST00000557529 SPOUT1Q5T280 376 aaKnown RBP12.97□□□□□ -0.33
SHMT2-233ENST00000557529 BTBD8Q5XKL5 378 aa12.97□□□□□ -0.33
SHMT2-233ENST00000557529 ALS2CLQ60I27 953 aa12.97□□□□□ -0.33
SHMT2-233ENST00000557529 SLC9A4Q6AI14 798 aa12.97□□□□□ -0.33
SHMT2-233ENST00000557529 KCNT2Q6UVM3 1135 aa12.97□□□□□ -0.33
SHMT2-233ENST00000557529 ZDHHC24Q6UX98 284 aa12.97□□□□□ -0.33
SHMT2-233ENST00000557529 RNF168Q8IYW5 571 aaPredicted RBP12.97□□□□□ -0.33
SHMT2-233ENST00000557529 PCDH19Q8TAB3 1148 aa12.97□□□□□ -0.33
SHMT2-233ENST00000557529 SCAMP5Q8TAC9 235 aa12.97□□□□□ -0.33
SHMT2-233ENST00000557529 PIK3R5Q8WYR1 880 aa12.97□□□□□ -0.33
SHMT2-233ENST00000557529 ART4Q93070 314 aa12.97□□□□□ -0.33
SHMT2-233ENST00000557529 B3GALT6Q96L58 329 aa12.97□□□□□ -0.33
SHMT2-233ENST00000557529 CEP295NLQ96MC4 621 aa12.97□□□□□ -0.33
SHMT2-233ENST00000557529 KCTD15Q96SI1 283 aaPredicted RBP12.97□□□□□ -0.33
SHMT2-233ENST00000557529 TSPYL1Q9H0U9 437 aa12.97□□□□□ -0.33
SHMT2-233ENST00000557529 NEUROG2Q9H2A3 272 aa12.97□□□□□ -0.33
SHMT2-233ENST00000557529 IL23AQ9NPF7 189 aa12.97□□□□□ -0.33
SHMT2-233ENST00000557529 DDIT4Q9NX09 232 aa12.97□□□□□ -0.33
SHMT2-233ENST00000557529 CALCOCO1Q9P1Z2 691 aa12.97□□□□□ -0.33
SHMT2-233ENST00000557529 MTRRQ9UBK8 725 aa12.97□□□□□ -0.33
SHMT2-233ENST00000557529 SCML2Q9UQR0 700 aa12.97□□□□□ -0.33
SHMT2-233ENST00000557529 PCNTO95613 3336 aa12.97□□□□□ -0.33
SHMT2-233ENST00000557529 LTBP2Q14767 1821 aa12.97□□□□□ -0.33
SHMT2-233ENST00000557529 SYNJ2BP-COX16A0A087WUM0 186 aa12.96□□□□□ -0.33
SHMT2-233ENST00000557529 MTMR11A4FU01 709 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms