RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 PATJQ8NI35 1801 aa16.65■□□□□ 0.26
TUBB3-214ENST00000557490 COL4A3Q01955 1670 aa16.65■□□□□ 0.26
TUBB3-214ENST00000557490 CEP295Q9C0D2 2601 aa16.65■□□□□ 0.26
TUBB3-214ENST00000557490 TICRRQ7Z2Z1 1910 aa16.64■□□□□ 0.26
TUBB3-214ENST00000557490 FOXN3O00409 490 aaPredicted RBP16.64■□□□□ 0.25
TUBB3-214ENST00000557490 SCAMP3O14828 347 aaKnown RBP16.64■□□□□ 0.25
TUBB3-214ENST00000557490 MDM4O15151 490 aa16.64■□□□□ 0.25
TUBB3-214ENST00000557490 UCHL3P15374 230 aa16.64■□□□□ 0.25
TUBB3-214ENST00000557490 ZNF18P17022 549 aa16.64■□□□□ 0.25
TUBB3-214ENST00000557490 BPIFB4P59827 614 aa16.64■□□□□ 0.25
TUBB3-214ENST00000557490 DRAP1Q14919 205 aaPredicted RBP16.64■□□□□ 0.25
TUBB3-214ENST00000557490 SKOR2Q2VWA4 1001 aaPredicted RBP16.64■□□□□ 0.25
TUBB3-214ENST00000557490 DPY19L2P1Q6NXN4 242 aa16.64■□□□□ 0.25
TUBB3-214ENST00000557490 TXNDC11Q6PKC3 985 aa16.64■□□□□ 0.25
TUBB3-214ENST00000557490 ZNF687Q8N1G0 1237 aa16.64■□□□□ 0.25
TUBB3-214ENST00000557490 SCML4Q8N228 414 aa16.64■□□□□ 0.25
TUBB3-214ENST00000557490 SUMF1Q8NBK3 374 aa16.64■□□□□ 0.25
TUBB3-214ENST00000557490 NDRG1Q92597 394 aaKnown RBP16.64■□□□□ 0.25
TUBB3-214ENST00000557490 OTUB2Q96DC9 234 aa16.64■□□□□ 0.25
TUBB3-214ENST00000557490 ACP6Q9NPH0 428 aa16.64■□□□□ 0.25
TUBB3-214ENST00000557490 PLCB1Q9NQ66 1216 aa16.64■□□□□ 0.25
TUBB3-214ENST00000557490 ST7Q9NRC1 585 aa16.64■□□□□ 0.25
TUBB3-214ENST00000557490 SPATA6Q9NWH7 488 aaPredicted RBP16.64■□□□□ 0.25
TUBB3-214ENST00000557490 RASAL2Q9UJF2 1139 aa16.64■□□□□ 0.25
TUBB3-214ENST00000557490 STRIP2Q9ULQ0 834 aa16.64■□□□□ 0.25
TUBB3-214ENST00000557490 FHOD1Q9Y613 1164 aa16.64■□□□□ 0.25
TUBB3-214ENST00000557490 COL4A2P08572 1712 aa16.64■□□□□ 0.25
TUBB3-214ENST00000557490 SYCE3A1L190 88 aa16.63■□□□□ 0.25
TUBB3-214ENST00000557490 LGALS16A8MUM7 142 aa16.63■□□□□ 0.25
TUBB3-214ENST00000557490 PIK3R2O00459 728 aa16.63■□□□□ 0.25
TUBB3-214ENST00000557490 FBXO21O94952 628 aa16.63■□□□□ 0.25
TUBB3-214ENST00000557490 ADH1CP00326 375 aa16.63■□□□□ 0.25
TUBB3-214ENST00000557490 ADRB1P08588 477 aa16.63■□□□□ 0.25
TUBB3-214ENST00000557490 SDHBP21912 280 aa16.63■□□□□ 0.25
TUBB3-214ENST00000557490 GJA4P35212 333 aa16.63■□□□□ 0.25
TUBB3-214ENST00000557490 GPD2P43304 727 aa16.63■□□□□ 0.25
TUBB3-214ENST00000557490 ACADSBP45954 432 aa16.63■□□□□ 0.25
TUBB3-214ENST00000557490 ZNF165P49910 485 aa16.63■□□□□ 0.25
TUBB3-214ENST00000557490 DAOAP59103 153 aa16.63■□□□□ 0.25
TUBB3-214ENST00000557490 EFEMP1Q12805 493 aa16.63■□□□□ 0.25
TUBB3-214ENST00000557490 GRSF1Q12849 480 aaKnown RBP eCLIP16.63■□□□□ 0.25
TUBB3-214ENST00000557490 FZD5Q13467 585 aa16.63■□□□□ 0.25
TUBB3-214ENST00000557490 DGKKQ5KSL6 1271 aa16.63■□□□□ 0.25
TUBB3-214ENST00000557490 MIB1Q86YT6 1006 aa16.63■□□□□ 0.25
TUBB3-214ENST00000557490 C1orf210Q8IVY1 113 aa16.63■□□□□ 0.25
TUBB3-214ENST00000557490 FAM71AQ8IYT1 594 aa16.63■□□□□ 0.25
TUBB3-214ENST00000557490 STK32AQ8WU08 396 aa16.63■□□□□ 0.25
TUBB3-214ENST00000557490 RNF139Q8WU17 664 aa16.63■□□□□ 0.25
TUBB3-214ENST00000557490 IRGQQ8WZA9 623 aa16.63■□□□□ 0.25
TUBB3-214ENST00000557490 GOLGA1Q92805 767 aa16.63■□□□□ 0.25
TUBB3-214ENST00000557490 PCMTD1Q96MG8 357 aaPredicted RBP16.63■□□□□ 0.25
TUBB3-214ENST00000557490 STK33Q9BYT3 514 aa16.63■□□□□ 0.25
TUBB3-214ENST00000557490 OLA1Q9NTK5 396 aaKnown RBP16.63■□□□□ 0.25
TUBB3-214ENST00000557490 LRRC10BA6NIK2 292 aa16.62■□□□□ 0.25
TUBB3-214ENST00000557490 YJEFN3A6XGL0 299 aa16.62■□□□□ 0.25
TUBB3-214ENST00000557490 E7ENQ6 273 aa16.62■□□□□ 0.25
TUBB3-214ENST00000557490 TRDMT1O14717 391 aaKnown RBP16.62■□□□□ 0.25
TUBB3-214ENST00000557490 SP9P0CG40 484 aa16.62■□□□□ 0.25
TUBB3-214ENST00000557490 CHRNB1P11230 501 aa16.62■□□□□ 0.25
TUBB3-214ENST00000557490 KRT9P35527 623 aa16.62■□□□□ 0.25
TUBB3-214ENST00000557490 COG7P83436 770 aa16.62■□□□□ 0.25
TUBB3-214ENST00000557490 UBXN1Q04323 297 aa16.62■□□□□ 0.25
TUBB3-214ENST00000557490 DHCR24Q15392 516 aa16.62■□□□□ 0.25
TUBB3-214ENST00000557490 BSPRYQ5W0U4 402 aa16.62■□□□□ 0.25
TUBB3-214ENST00000557490 HTR3DQ70Z44 454 aa16.62■□□□□ 0.25
TUBB3-214ENST00000557490 BHLHA9Q7RTU4 235 aa16.62■□□□□ 0.25
TUBB3-214ENST00000557490 BBS7Q8IWZ6 715 aa16.62■□□□□ 0.25
TUBB3-214ENST00000557490 DHX40Q8IX18 779 aaKnown RBP16.62■□□□□ 0.25
TUBB3-214ENST00000557490 ADGRG2Q8IZP9 1017 aa16.62■□□□□ 0.25
TUBB3-214ENST00000557490 P2RY13Q9BPV8 354 aa16.62■□□□□ 0.25
TUBB3-214ENST00000557490 IER2Q9BTL4 223 aa16.62■□□□□ 0.25
TUBB3-214ENST00000557490 FUCA2Q9BTY2 467 aa16.62■□□□□ 0.25
TUBB3-214ENST00000557490 NAA15Q9BXJ9 866 aaKnown RBP16.62■□□□□ 0.25
TUBB3-214ENST00000557490 MIS12Q9H081 205 aa16.62■□□□□ 0.25
TUBB3-214ENST00000557490 HSD3B7Q9H2F3 369 aa16.62■□□□□ 0.25
TUBB3-214ENST00000557490 CHRDQ9H2X0 955 aa16.62■□□□□ 0.25
TUBB3-214ENST00000557490 ABCC13Q9NSE7 274 aa16.62■□□□□ 0.25
TUBB3-214ENST00000557490 FAM207AQ9NSI2 230 aaPredicted RBP16.62■□□□□ 0.25
TUBB3-214ENST00000557490 MARCH2Q9P0N8 246 aa16.62■□□□□ 0.25
TUBB3-214ENST00000557490 DAAM1Q9Y4D1 1078 aa16.62■□□□□ 0.25
TUBB3-214ENST00000557490 KIF26AQ9ULI4 1882 aaPredicted RBP16.61■□□□□ 0.25
TUBB3-214ENST00000557490 SART1O43290 800 aaKnown RBP16.61■□□□□ 0.25
TUBB3-214ENST00000557490 LAMTOR5O43504 91 aa16.61■□□□□ 0.25
TUBB3-214ENST00000557490 GABBR2O75899 941 aa16.61■□□□□ 0.25
TUBB3-214ENST00000557490 CYP17A1P05093 508 aa16.61■□□□□ 0.25
TUBB3-214ENST00000557490 PNMA6AP0CW24 399 aaPredicted RBP16.61■□□□□ 0.25
TUBB3-214ENST00000557490 CLCN1P35523 988 aa16.61■□□□□ 0.25
TUBB3-214ENST00000557490 GALK1P51570 392 aa16.61■□□□□ 0.25
TUBB3-214ENST00000557490 SYCP1Q15431 976 aa16.61■□□□□ 0.25
TUBB3-214ENST00000557490 TMEM196Q5HYL7 178 aa16.61■□□□□ 0.25
TUBB3-214ENST00000557490 SLC47A2Q86VL8 602 aa16.61■□□□□ 0.25
TUBB3-214ENST00000557490 SYNPOQ8N3V7 929 aa16.61■□□□□ 0.25
TUBB3-214ENST00000557490 EDEM1Q92611 657 aa16.61■□□□□ 0.25
TUBB3-214ENST00000557490 CD101Q93033 1021 aa16.61■□□□□ 0.25
TUBB3-214ENST00000557490 WBP2Q969T9 261 aa16.61■□□□□ 0.25
TUBB3-214ENST00000557490 NOX5Q96PH1 765 aa16.61■□□□□ 0.25
TUBB3-214ENST00000557490 PDCL3Q9H2J4 239 aa16.61■□□□□ 0.25
TUBB3-214ENST00000557490 PCDHGC3Q9UN70 934 aa16.61■□□□□ 0.25
TUBB3-214ENST00000557490 ZNF510Q9Y2H8 683 aa16.61■□□□□ 0.25
TUBB3-214ENST00000557490 CEP83Q9Y592 693 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms