RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 FAM159BA6NKW6 160 aa16.88■□□□□ 0.29
SHMT2-232ENST00000557487 MAFO75444 373 aaPredicted RBP16.88■□□□□ 0.29
SHMT2-232ENST00000557487 RTN3O95197 1032 aaPredicted RBP16.88■□□□□ 0.29
SHMT2-232ENST00000557487 IL18RAPO95256 599 aa16.88■□□□□ 0.29
SHMT2-232ENST00000557487 HMGCRP04035 888 aa16.88■□□□□ 0.29
SHMT2-232ENST00000557487 ERBB2P04626 1255 aa16.88■□□□□ 0.29
SHMT2-232ENST00000557487 HOXC6P09630 235 aa16.88■□□□□ 0.29
SHMT2-232ENST00000557487 PIM1P11309 404 aaPredicted RBP16.88■□□□□ 0.29
SHMT2-232ENST00000557487 GPD1P21695 349 aa16.88■□□□□ 0.29
SHMT2-232ENST00000557487 PSMC4P43686 418 aa16.88■□□□□ 0.29
SHMT2-232ENST00000557487 CDH6P55285 790 aa16.88■□□□□ 0.29
SHMT2-232ENST00000557487 STXBP2Q15833 593 aa16.88■□□□□ 0.29
SHMT2-232ENST00000557487 HSF5Q4G112 596 aaPredicted RBP16.88■□□□□ 0.29
SHMT2-232ENST00000557487 BOLA3Q53S33 107 aa16.88■□□□□ 0.29
SHMT2-232ENST00000557487 ZNF667Q5HYK9 610 aa16.88■□□□□ 0.29
SHMT2-232ENST00000557487 IER5Q5VY09 327 aa16.88■□□□□ 0.29
SHMT2-232ENST00000557487 FAM160B1Q5W0V3 765 aa16.88■□□□□ 0.29
SHMT2-232ENST00000557487 IZUMO2Q6UXV1 221 aa16.88■□□□□ 0.29
SHMT2-232ENST00000557487 KBTBD2Q8IY47 623 aa16.88■□□□□ 0.29
SHMT2-232ENST00000557487 GSDMBQ8TAX9 411 aa16.88■□□□□ 0.29
SHMT2-232ENST00000557487 PIP4K2CQ8TBX8 421 aa16.88■□□□□ 0.29
SHMT2-232ENST00000557487 TRPM4Q8TD43 1214 aa16.88■□□□□ 0.29
SHMT2-232ENST00000557487 DTNBP1Q96EV8 351 aa16.88■□□□□ 0.29
SHMT2-232ENST00000557487 ADPGKQ9BRR6 497 aa16.88■□□□□ 0.29
SHMT2-232ENST00000557487 CENPKQ9BS16 269 aa16.88■□□□□ 0.29
SHMT2-232ENST00000557487 THTPAQ9BU02 230 aa16.88■□□□□ 0.29
SHMT2-232ENST00000557487 AS3MTQ9HBK9 375 aa16.88■□□□□ 0.29
SHMT2-232ENST00000557487 PARP14Q460N5 1801 aa16.88■□□□□ 0.29
SHMT2-232ENST00000557487 C2orf71A6NGG8 1288 aa16.88■□□□□ 0.29
SHMT2-232ENST00000557487 TPSB2P20231 275 aa16.88■□□□□ 0.29
SHMT2-232ENST00000557487 MAGEA3P43357 314 aa16.88■□□□□ 0.29
SHMT2-232ENST00000557487 TFAMQ00059 246 aaKnown RBP16.88■□□□□ 0.29
SHMT2-232ENST00000557487 HIC1Q14526 733 aa16.88■□□□□ 0.29
SHMT2-232ENST00000557487 MXD4Q14582 209 aaPredicted RBP16.88■□□□□ 0.29
SHMT2-232ENST00000557487 TPSAB1Q15661 275 aa16.88■□□□□ 0.29
SHMT2-232ENST00000557487 ACAD11Q709F0 780 aa16.88■□□□□ 0.29
SHMT2-232ENST00000557487 SAMD7Q7Z3H4 446 aa16.88■□□□□ 0.29
SHMT2-232ENST00000557487 TAB3Q8N5C8 712 aaPredicted RBP16.88■□□□□ 0.29
SHMT2-232ENST00000557487 EMC1Q8N766 993 aa16.88■□□□□ 0.29
SHMT2-232ENST00000557487 DNERQ8NFT8 737 aa16.88■□□□□ 0.29
SHMT2-232ENST00000557487 FAM167AQ96KS9 214 aa16.88■□□□□ 0.29
SHMT2-232ENST00000557487 RILPQ96NA2 401 aa16.88■□□□□ 0.29
SHMT2-232ENST00000557487 TBCBQ99426 244 aa16.88■□□□□ 0.29
SHMT2-232ENST00000557487 CYP3A43Q9HB55 503 aa16.88■□□□□ 0.29
SHMT2-232ENST00000557487 VCX3AQ9NNX9 186 aa16.88■□□□□ 0.29
SHMT2-232ENST00000557487 DMAP1Q9NPF5 467 aaPredicted RBP16.88■□□□□ 0.29
SHMT2-232ENST00000557487 WNT10BO00744 389 aa16.87■□□□□ 0.29
SHMT2-232ENST00000557487 APOL1O14791 398 aa16.87■□□□□ 0.29
SHMT2-232ENST00000557487 PRPSAP2O60256 369 aa16.87■□□□□ 0.29
SHMT2-232ENST00000557487 UPP2O95045 317 aa16.87■□□□□ 0.29
SHMT2-232ENST00000557487 ZBED1O96006 694 aa16.87■□□□□ 0.29
SHMT2-232ENST00000557487 CPA2P48052 419 aa16.87■□□□□ 0.29
SHMT2-232ENST00000557487 PTPN11Q06124 597 aaPredicted RBP16.87■□□□□ 0.29
SHMT2-232ENST00000557487 PDCD2Q16342 344 aaPredicted RBP16.87■□□□□ 0.29
SHMT2-232ENST00000557487 SEZ6Q53EL9 994 aa16.87■□□□□ 0.29
SHMT2-232ENST00000557487 SCARA5Q6ZMJ2 495 aa16.87■□□□□ 0.29
SHMT2-232ENST00000557487 CDKL3Q8IVW4 592 aaPredicted RBP16.87■□□□□ 0.29
SHMT2-232ENST00000557487 ST13P4Q8IZP2 240 aaPredicted RBP16.87■□□□□ 0.29
SHMT2-232ENST00000557487 STKLD1Q8NE28 680 aa16.87■□□□□ 0.29
SHMT2-232ENST00000557487 NCSTNQ92542 709 aa16.87■□□□□ 0.29
SHMT2-232ENST00000557487 C12orf42Q96LP6 360 aa16.87■□□□□ 0.29
SHMT2-232ENST00000557487 TEX13BQ9BXU2 312 aa16.87■□□□□ 0.29
SHMT2-232ENST00000557487 XAB2Q9HCS7 855 aaKnown RBP16.87■□□□□ 0.29
SHMT2-232ENST00000557487 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.87■□□□□ 0.29
SHMT2-232ENST00000557487 ETNK2Q9NVF9 386 aa16.87■□□□□ 0.29
SHMT2-232ENST00000557487 ITGA11Q9UKX5 1188 aa16.87■□□□□ 0.29
SHMT2-232ENST00000557487 ZNF214Q9UL59 606 aaPredicted RBP16.87■□□□□ 0.29
SHMT2-232ENST00000557487 CLEC11AQ9Y240 323 aa16.87■□□□□ 0.29
SHMT2-232ENST00000557487 TELO2Q9Y4R8 837 aa16.87■□□□□ 0.29
SHMT2-232ENST00000557487 SLC15A5A6NIM6 579 aa16.86■□□□□ 0.29
SHMT2-232ENST00000557487 KCNN4O15554 427 aa16.86■□□□□ 0.29
SHMT2-232ENST00000557487 CCNT2O60583 730 aaKnown RBP16.86■□□□□ 0.29
SHMT2-232ENST00000557487 DESP17661 470 aa16.86■□□□□ 0.29
SHMT2-232ENST00000557487 CDK7P50613 346 aa16.86■□□□□ 0.29
SHMT2-232ENST00000557487 BACE1P56817 501 aa16.86■□□□□ 0.29
SHMT2-232ENST00000557487 KDSRQ06136 332 aa16.86■□□□□ 0.29
SHMT2-232ENST00000557487 NAB1Q13506 487 aa16.86■□□□□ 0.29
SHMT2-232ENST00000557487 EFHC1Q5JVL4 640 aa16.86■□□□□ 0.29
SHMT2-232ENST00000557487 ZBTB33Q86T24 672 aa16.86■□□□□ 0.29
SHMT2-232ENST00000557487 CAND1Q86VP6 1230 aaKnown RBP16.86■□□□□ 0.29
SHMT2-232ENST00000557487 NDUFAF2Q8N183 169 aa16.86■□□□□ 0.29
SHMT2-232ENST00000557487 TTC39CQ8N584 583 aa16.86■□□□□ 0.29
SHMT2-232ENST00000557487 PLD5Q8N7P1 536 aa16.86■□□□□ 0.29
SHMT2-232ENST00000557487 AZIN2Q96A70 460 aa16.86■□□□□ 0.29
SHMT2-232ENST00000557487 S100A14Q9HCY8 104 aa16.86■□□□□ 0.29
SHMT2-232ENST00000557487 MYOZ2Q9NPC6 264 aa16.86■□□□□ 0.29
SHMT2-232ENST00000557487 DOCK5Q9H7D0 1870 aa16.86■□□□□ 0.29
SHMT2-232ENST00000557487 CXorf49A8MYA2 514 aaPredicted RBP16.86■□□□□ 0.29
SHMT2-232ENST00000557487 DPYSL4O14531 572 aa16.86■□□□□ 0.29
SHMT2-232ENST00000557487 ITGBL1O95965 494 aaPredicted RBP16.86■□□□□ 0.29
SHMT2-232ENST00000557487 EGFRP00533 1210 aa16.86■□□□□ 0.29
SHMT2-232ENST00000557487 PRKCBP05771 671 aa16.86■□□□□ 0.29
SHMT2-232ENST00000557487 VDRP11473 427 aa16.86■□□□□ 0.29
SHMT2-232ENST00000557487 P4HA1P13674 534 aa16.86■□□□□ 0.29
SHMT2-232ENST00000557487 PROZP22891 400 aa16.86■□□□□ 0.29
SHMT2-232ENST00000557487 ATICP31939 592 aa16.86■□□□□ 0.29
SHMT2-232ENST00000557487 CLCN2P51788 898 aa16.86■□□□□ 0.29
SHMT2-232ENST00000557487 CDC16Q13042 620 aa16.86■□□□□ 0.29
SHMT2-232ENST00000557487 KRT81Q14533 505 aa16.86■□□□□ 0.29
SHMT2-232ENST00000557487 MAP3K21Q5TCX8 1036 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms