RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 SPDYCQ5MJ68 293 aa16.73■□□□□ 0.27
TUBB3-213ENST00000557262 C10orf120Q5SQS8 335 aa16.73■□□□□ 0.27
TUBB3-213ENST00000557262 DAB2IPQ5VWQ8 1189 aa16.73■□□□□ 0.27
TUBB3-213ENST00000557262 TPGS1Q6ZTW0 290 aa16.73■□□□□ 0.27
TUBB3-213ENST00000557262 CCDC186Q7Z3E2 898 aa16.73■□□□□ 0.27
TUBB3-213ENST00000557262 SCD5Q86SK9 330 aa16.73■□□□□ 0.27
TUBB3-213ENST00000557262 TADA2BQ86TJ2 420 aa16.73■□□□□ 0.27
TUBB3-213ENST00000557262 FRMD1Q8N878 549 aa16.73■□□□□ 0.27
TUBB3-213ENST00000557262 FBXL13Q8NEE6 735 aa16.73■□□□□ 0.27
TUBB3-213ENST00000557262 PIGKQ92643 395 aa16.73■□□□□ 0.27
TUBB3-213ENST00000557262 SEMA4DQ92854 862 aa16.73■□□□□ 0.27
TUBB3-213ENST00000557262 UBXN6Q9BZV1 441 aa16.73■□□□□ 0.27
TUBB3-213ENST00000557262 DNAJC17Q9NVM6 304 aaKnown RBP16.73■□□□□ 0.27
TUBB3-213ENST00000557262 RAB20Q9NX57 234 aa16.73■□□□□ 0.27
TUBB3-213ENST00000557262 CLIC5Q9NZA1 410 aa16.73■□□□□ 0.27
TUBB3-213ENST00000557262 MARK1Q9P0L2 795 aa16.73■□□□□ 0.27
TUBB3-213ENST00000557262 NAGPAQ9UK23 515 aa16.73■□□□□ 0.27
TUBB3-213ENST00000557262 HCN2Q9UL51 889 aa16.73■□□□□ 0.27
TUBB3-213ENST00000557262 USP3Q9Y6I4 520 aa16.73■□□□□ 0.27
TUBB3-213ENST00000557262 THADAQ6YHU6 1953 aa16.73■□□□□ 0.27
TUBB3-213ENST00000557262 EPG5Q9HCE0 2579 aa16.72■□□□□ 0.27
TUBB3-213ENST00000557262 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.72■□□□□ 0.27
TUBB3-213ENST00000557262 LNP1A1A4G5 178 aa16.72■□□□□ 0.27
TUBB3-213ENST00000557262 PATE3B3GLJ2 98 aa16.72■□□□□ 0.27
TUBB3-213ENST00000557262 MDM4O15151 490 aa16.72■□□□□ 0.27
TUBB3-213ENST00000557262 IRX4P78413 519 aa16.72■□□□□ 0.27
TUBB3-213ENST00000557262 SDE2Q6IQ49 451 aa16.72■□□□□ 0.27
TUBB3-213ENST00000557262 TMEFF1Q8IYR6 380 aa16.72■□□□□ 0.27
TUBB3-213ENST00000557262 EEF2KMTQ96G04 330 aa16.72■□□□□ 0.27
TUBB3-213ENST00000557262 TMEM176AQ96HP8 235 aa16.72■□□□□ 0.27
TUBB3-213ENST00000557262 CDK5RAP1Q96SZ6 601 aaKnown RBP16.72■□□□□ 0.27
TUBB3-213ENST00000557262 GDPD2Q9HCC8 539 aa16.72■□□□□ 0.27
TUBB3-213ENST00000557262 MBD1Q9UIS9 605 aaPredicted RBP16.72■□□□□ 0.27
TUBB3-213ENST00000557262 CACNA1BQ00975 2339 aa16.71■□□□□ 0.27
TUBB3-213ENST00000557262 ZBTB24O43167 697 aaPredicted RBP16.71■□□□□ 0.27
TUBB3-213ENST00000557262 STC2O76061 302 aa16.71■□□□□ 0.27
TUBB3-213ENST00000557262 EPB41P11171 864 aaKnown RBP16.71■□□□□ 0.27
TUBB3-213ENST00000557262 HOXB2P14652 356 aa16.71■□□□□ 0.27
TUBB3-213ENST00000557262 GABRG2P18507 467 aa16.71■□□□□ 0.27
TUBB3-213ENST00000557262 PMLP29590 882 aa16.71■□□□□ 0.27
TUBB3-213ENST00000557262 WASP42768 502 aa16.71■□□□□ 0.27
TUBB3-213ENST00000557262 MXI1P50539 228 aa16.71■□□□□ 0.27
TUBB3-213ENST00000557262 COG7P83436 770 aa16.71■□□□□ 0.27
TUBB3-213ENST00000557262 Q6ZNB5 142 aa16.71■□□□□ 0.27
TUBB3-213ENST00000557262 MIB1Q86YT6 1006 aa16.71■□□□□ 0.27
TUBB3-213ENST00000557262 SYT12Q8IV01 421 aa16.71■□□□□ 0.27
TUBB3-213ENST00000557262 SMYD4Q8IYR2 804 aaPredicted RBP16.71■□□□□ 0.27
TUBB3-213ENST00000557262 SLC4A11Q8NBS3 891 aa16.71■□□□□ 0.27
TUBB3-213ENST00000557262 TATDN2Q93075 761 aa16.71■□□□□ 0.27
TUBB3-213ENST00000557262 FAM124BQ9H5Z6 455 aaPredicted RBP16.71■□□□□ 0.27
TUBB3-213ENST00000557262 TMEM9BQ9NQ34 198 aa16.71■□□□□ 0.27
TUBB3-213ENST00000557262 CISHQ9NSE2 258 aa16.71■□□□□ 0.27
TUBB3-213ENST00000557262 EVLQ9UI08 416 aaPredicted RBP16.71■□□□□ 0.27
TUBB3-213ENST00000557262 ZNF510Q9Y2H8 683 aa16.71■□□□□ 0.27
TUBB3-213ENST00000557262 MYO18AQ92614 2054 aaKnown RBP16.71■□□□□ 0.27
TUBB3-213ENST00000557262 PRRT4C9JH25 899 aa16.7■□□□□ 0.26
TUBB3-213ENST00000557262 CDX4O14627 284 aaPredicted RBP16.7■□□□□ 0.26
TUBB3-213ENST00000557262 CISD3P0C7P0 127 aa16.7■□□□□ 0.26
TUBB3-213ENST00000557262 DPP6P42658 865 aa16.7■□□□□ 0.26
TUBB3-213ENST00000557262 PRCPP42785 496 aa16.7■□□□□ 0.26
TUBB3-213ENST00000557262 DGKGP49619 791 aa16.7■□□□□ 0.26
TUBB3-213ENST00000557262 RAD23BP54727 409 aa16.7■□□□□ 0.26
TUBB3-213ENST00000557262 PNOCQ13519 176 aa16.7■□□□□ 0.26
TUBB3-213ENST00000557262 EGFLAMQ63HQ2 1017 aa16.7■□□□□ 0.26
TUBB3-213ENST00000557262 CHPFQ8IZ52 775 aa16.7■□□□□ 0.26
TUBB3-213ENST00000557262 ACOX2Q99424 681 aa16.7■□□□□ 0.26
TUBB3-213ENST00000557262 DCLK3Q9C098 648 aa16.7■□□□□ 0.26
TUBB3-213ENST00000557262 RMND1Q9NWS8 449 aa16.7■□□□□ 0.26
TUBB3-213ENST00000557262 FBXO10Q9UK96 956 aa16.7■□□□□ 0.26
TUBB3-213ENST00000557262 ANGPTL2Q9UKU9 493 aa16.7■□□□□ 0.26
TUBB3-213ENST00000557262 NUP205Q92621 2012 aa16.7■□□□□ 0.26
TUBB3-213ENST00000557262 A0A1W2PQF6 199 aa16.69■□□□□ 0.26
TUBB3-213ENST00000557262 AP5Z1O43299 807 aa16.69■□□□□ 0.26
TUBB3-213ENST00000557262 KLKB1P03952 638 aa16.69■□□□□ 0.26
TUBB3-213ENST00000557262 CHKAP35790 457 aa16.69■□□□□ 0.26
TUBB3-213ENST00000557262 PTGER3P43115 390 aa16.69■□□□□ 0.26
TUBB3-213ENST00000557262 SLC8A3P57103 927 aa16.69■□□□□ 0.26
TUBB3-213ENST00000557262 LMAN2Q12907 356 aa16.69■□□□□ 0.26
TUBB3-213ENST00000557262 TRIM61Q5EBN2 209 aa16.69■□□□□ 0.26
TUBB3-213ENST00000557262 RAB41Q5JT25 222 aa16.69■□□□□ 0.26
TUBB3-213ENST00000557262 ARHGAP17Q68EM7 881 aa16.69■□□□□ 0.26
TUBB3-213ENST00000557262 SLC36A4Q6YBV0 504 aa16.69■□□□□ 0.26
TUBB3-213ENST00000557262 TOGARAM2Q6ZUX3 1019 aa16.69■□□□□ 0.26
TUBB3-213ENST00000557262 ARMCX6Q7L4S7 300 aa16.69■□□□□ 0.26
TUBB3-213ENST00000557262 PIGZQ86VD9 579 aa16.69■□□□□ 0.26
TUBB3-213ENST00000557262 ARHGAP18Q8N392 663 aa16.69■□□□□ 0.26
TUBB3-213ENST00000557262 ANKRD52Q8NB46 1076 aa16.69■□□□□ 0.26
TUBB3-213ENST00000557262 IPO4Q8TEX9 1081 aaKnown RBP16.69■□□□□ 0.26
TUBB3-213ENST00000557262 GSDMAQ96QA5 445 aa16.69■□□□□ 0.26
TUBB3-213ENST00000557262 TSG101Q99816 390 aa16.69■□□□□ 0.26
TUBB3-213ENST00000557262 NUSAP1Q9BXS6 441 aaKnown RBP16.69■□□□□ 0.26
TUBB3-213ENST00000557262 TMEM74BQ9NUR3 256 aa16.69■□□□□ 0.26
TUBB3-213ENST00000557262 PLK2Q9NYY3 685 aa16.69■□□□□ 0.26
TUBB3-213ENST00000557262 COQ4Q9Y3A0 265 aa16.69■□□□□ 0.26
TUBB3-213ENST00000557262 GFRA2O00451 464 aa16.68■□□□□ 0.26
TUBB3-213ENST00000557262 ZNF217O75362 1048 aa16.68■□□□□ 0.26
TUBB3-213ENST00000557262 NOVA1P51513 510 aaKnown RBP16.68■□□□□ 0.26
TUBB3-213ENST00000557262 SHC2P98077 582 aa16.68■□□□□ 0.26
TUBB3-213ENST00000557262 FKBP3Q00688 224 aaKnown RBP16.68■□□□□ 0.26
TUBB3-213ENST00000557262 EFEMP1Q12805 493 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms