RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 PCYOX1Q9UHG3 505 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 EFR3BQ9Y2G0 817 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 GMEB1Q9Y692 573 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 TCRBV5S1A1TA0A578 114 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 PI4K2BG5E9Z4 385 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 PDLIM1O00151 329 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 TOR1BO14657 336 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 SPTLC1O15269 473 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 OGTO15294 1046 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 LUC7L3O95232 432 aaKnown RBP5.29□□□□□ -1.56
TMEM260-210ENST00000556422 UBL4AP11441 157 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 GNA15P30679 374 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 SERPINB4P48594 390 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 GABREP78334 506 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 MAPK6Q16659 721 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 AMHR2Q16671 573 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 UBAP2Q5T6F2 1119 aaKnown RBP5.29□□□□□ -1.56
TMEM260-210ENST00000556422 WLSQ5T9L3 541 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 PRR23CQ6ZRP0 262 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 SLC13A5Q86YT5 568 aaPredicted RBP5.29□□□□□ -1.56
TMEM260-210ENST00000556422 SPARTQ8N0X7 666 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 ABRAQ8N0Z2 381 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 UBL4BQ8N7F7 174 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 RBBP8NLQ8NC74 664 aaPredicted RBP5.29□□□□□ -1.56
TMEM260-210ENST00000556422 SHCBP1Q8NEM2 672 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 OR2W6PQ8NHA6 318 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 CCHCR1Q8TD31 782 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 DDI1Q8WTU0 396 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 ACAP3Q96P50 834 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 ERP44Q9BS26 406 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 OSBPL2Q9H1P3 480 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 CCDC177Q9NQR7 707 aaPredicted RBP5.29□□□□□ -1.56
TMEM260-210ENST00000556422 ZC3H7BQ9UGR2 993 aaKnown RBP5.29□□□□□ -1.56
TMEM260-210ENST00000556422 CHMP2BQ9UQN3 213 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 GOLGA8CPA6NN73 597 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 MYO1FO00160 1098 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 ADCY6O43306 1168 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 MTSS1O43312 755 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 SPOPO43791 374 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 HSF2BPO75031 334 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 RPS6KA5O75582 802 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 SCGB1D2O95969 90 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 RARAP10276 462 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 HSD3B2P26439 372 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 ASPAP45381 313 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 SLC26A2P50443 739 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 ZNF252P-AS1Q0IIN9 211 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 CSTF3Q12996 717 aaKnown RBP5.28□□□□□ -1.56
TMEM260-210ENST00000556422 MAMLD1Q13495 774 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 DPYSQ14117 519 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 ERAP2Q6P179 960 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 PHF13Q86YI8 300 aaPredicted RBP5.28□□□□□ -1.56
TMEM260-210ENST00000556422 LURAP1LQ8IV03 231 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 C12orf50Q8NA57 414 aaPredicted RBP5.28□□□□□ -1.56
TMEM260-210ENST00000556422 ZNF606Q8WXB4 792 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 FAM161BQ96MY7 647 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 APBA2Q99767 749 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 C11orf70Q9BRQ4 267 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 TRIM31Q9BZY9 425 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 PLAAQ9Y263 795 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 TRAV6A0A075B6T7 132 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 GLTPD2A6NH11 291 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 GOLGA8KD6RF30 607 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 ACKR2O00590 384 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 CSDE1O75534 798 aaKnown RBP5.28□□□□□ -1.56
TMEM260-210ENST00000556422 GJB6O95452 261 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 LGALS2P05162 132 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 CCDC166P0CW27 439 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 IDO1P14902 403 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 RAC2P15153 192 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 OSBPP22059 807 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 TBXAS1P24557 533 aaPredicted RBP5.28□□□□□ -1.56
TMEM260-210ENST00000556422 ADORA2AP29274 412 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 NSFP46459 744 aaKnown RBP5.28□□□□□ -1.56
TMEM260-210ENST00000556422 RPL21P46778 160 aaKnown RBP5.28□□□□□ -1.56
TMEM260-210ENST00000556422 SLC12A2P55011 1212 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 OLR1P78380 273 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 KDSRQ06136 332 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 ZNF844Q08AG5 666 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 ASPHQ12797 758 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 PPFIA1Q13136 1202 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 KLF1Q13351 362 aaPredicted RBP5.28□□□□□ -1.56
TMEM260-210ENST00000556422 SNAPC2Q13487 334 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 DHX34Q14147 1143 aaKnown RBP5.28□□□□□ -1.56
TMEM260-210ENST00000556422 LLGL1Q15334 1064 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 KCTD16Q68DU8 428 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 PLEKHA7Q6IQ23 1121 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 EFCAB12Q6NXP0 572 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 FAM180BQ6P0A1 224 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 CCDC137Q6PK04 289 aaKnown RBP5.28□□□□□ -1.56
TMEM260-210ENST00000556422 MPZL3Q6UWV2 235 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 CAND1Q86VP6 1230 aaKnown RBP5.28□□□□□ -1.56
TMEM260-210ENST00000556422 WDTC1Q8N5D0 677 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 AADATQ8N5Z0 425 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 PPM1NQ8N819 430 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 FBXO25Q8TCJ0 367 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 C16orf70Q9BSU1 422 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 NFKBIZQ9BYH8 718 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 CDT1Q9H211 546 aa5.28□□□□□ -1.56
TMEM260-210ENST00000556422 SMARCAD1Q9H4L7 1026 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms