RNA–Protein interactions for RNA: ENST00000556067.1

ATL1-208, Transcript of atlastin GTPase 1, human

TSL 4

Gene ATL1, Length 550 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATL1-208	ENST00000556067	TCF12	Q99081	682 aa		5.85	□□□□□ -1.47
ATL1-208	ENST00000556067	NAP1L3	Q99457	506 aa	Predicted RBP	5.85	□□□□□ -1.47
ATL1-208	ENST00000556067	SYT15	Q9BQS2	421 aa		5.85	□□□□□ -1.47
ATL1-208	ENST00000556067	TMEM175	Q9BSA9	504 aa		5.85	□□□□□ -1.47
ATL1-208	ENST00000556067	WNT8A	Q9H1J5	351 aa		5.85	□□□□□ -1.47
ATL1-208	ENST00000556067	CXCL16	Q9H2A7	254 aa		5.85	□□□□□ -1.47
ATL1-208	ENST00000556067	L2HGDH	Q9H9P8	463 aa		5.85	□□□□□ -1.47
ATL1-208	ENST00000556067	PRDM10	Q9NQV6	1147 aa		5.85	□□□□□ -1.47
ATL1-208	ENST00000556067	FAM49B	Q9NUQ9	324 aa		5.85	□□□□□ -1.47
ATL1-208	ENST00000556067	TBC1D13	Q9NVG8	400 aa		5.85	□□□□□ -1.47
ATL1-208	ENST00000556067	MIOS	Q9NXC5	875 aa		5.85	□□□□□ -1.47
ATL1-208	ENST00000556067	DDX43	Q9NXZ2	648 aa	Known RBP	5.85	□□□□□ -1.47
ATL1-208	ENST00000556067	IP6K2	Q9UHH9	426 aa		5.85	□□□□□ -1.47
ATL1-208	ENST00000556067	ANAPC7	Q9UJX3	599 aa		5.85	□□□□□ -1.47
ATL1-208	ENST00000556067	TSPAN16	Q9UKR8	245 aa		5.85	□□□□□ -1.47
ATL1-208	ENST00000556067	TBX21	Q9UL17	535 aa		5.85	□□□□□ -1.47
ATL1-208	ENST00000556067	CDH9	Q9ULB4	789 aa		5.85	□□□□□ -1.47
ATL1-208	ENST00000556067	SNX12	Q9UMY4	172 aa		5.85	□□□□□ -1.47
ATL1-208	ENST00000556067	L1RE1	Q9UN81	338 aa		5.85	□□□□□ -1.47
ATL1-208	ENST00000556067	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	5.85	□□□□□ -1.47
ATL1-208	ENST00000556067	FAN1	Q9Y2M0	1017 aa		5.85	□□□□□ -1.47
ATL1-208	ENST00000556067	MRFAP1	Q9Y605	127 aa		5.85	□□□□□ -1.47
ATL1-208	ENST00000556067	TRIP12	Q14669	1992 aa	Predicted RBP	5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	UQCRHL	A0A096LP55	91 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	GOLGA6L10	A0A0M3HER8	536 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	CCDC66	A2RUB6	948 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	GOLGA8S	H3BPF8	625 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067		H7C4K7	107 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	CES2	O00748	559 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	KIAA0355	O15063	1070 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	NCK2	O43639	380 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	CEP104	O60308	925 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	BUB1B	O60566	1050 aa	Predicted RBP	5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	RNF8	O76064	485 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	UQCRH	P07919	91 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	FAM200B	P0CF97	657 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	KRT3	P12035	628 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	ALDH7A1	P49419	539 aa	Known RBP	5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	RWDD2B	P57060	319 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	GSTM4	Q03013	218 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	YWHAH	Q04917	246 aa	Predicted RBP	5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	BST2	Q10589	180 aa	Known RBP	5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	PDCL	Q13371	301 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	PPIG	Q13427	754 aa	Known RBP eCLIP	5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	PIGH	Q14442	188 aa	Predicted RBP	5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	HADH	Q16836	314 aa	Known RBP	5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	LRRC26	Q2I0M4	334 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	PAN2	Q504Q3	1202 aa	Known RBP	5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	TIGD5	Q53EQ6	642 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	MDH1B	Q5I0G3	518 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	CLLU1OS	Q5K130	101 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	SEL1L2	Q5TEA6	688 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	SCARA3	Q6AZY7	606 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	OVOS1	Q6IE37	1185 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	OR6B2	Q6IFH4	312 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	PLEKHA7	Q6IQ23	1121 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	MFSD5	Q6N075	450 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	C4orf50	Q6ZRC1	276 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	MON1B	Q7L1V2	547 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	SLFN11	Q7Z7L1	901 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	PHLDB2	Q86SQ0	1253 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	DNAAF5	Q86Y56	855 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	CCNJL	Q8IV13	435 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	RHOT1	Q8IXI2	618 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	SIX6OS1	Q8N1H7	587 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	B3GALNT2	Q8NCR0	500 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	C3orf20	Q8ND61	904 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	GSTCD	Q8NEC7	633 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	SLC2A14	Q8TDB8	520 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	KBTBD7	Q8WVZ9	684 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	MAIP1	Q8WWC4	291 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	ALKBH8	Q96BT7	664 aa	Known RBP	5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	CAPZA3	Q96KX2	299 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	TWNK	Q96RR1	684 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	OSBPL9	Q96SU4	736 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	NCAPG	Q9BPX3	1015 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	ACBD6	Q9BR61	282 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	CARD6	Q9BX69	1037 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	OSBPL7	Q9BZF2	842 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	LRRC4	Q9HBW1	653 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	OSGEP	Q9NPF4	335 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	ASNSD1	Q9NWL6	643 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	HMGXB4	Q9UGU5	601 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	PRG3	Q9Y2Y8	225 aa	Predicted RBP	5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	ALG6	Q9Y672	507 aa		5.84	□□□□□ -1.47
ATL1-208	ENST00000556067	SF3B1	O75533	1304 aa	Known RBP eCLIP	5.83	□□□□□ -1.48
ATL1-208	ENST00000556067	SIGLEC16	A6NMB1	481 aa		5.83	□□□□□ -1.48
ATL1-208	ENST00000556067	EFCAB8	A8MWE9	144 aa		5.83	□□□□□ -1.48
ATL1-208	ENST00000556067	TMEM189-UBE2V1	I3L0A0	370 aa		5.83	□□□□□ -1.48
ATL1-208	ENST00000556067		M0QZQ0	153 aa		5.83	□□□□□ -1.48
ATL1-208	ENST00000556067	PGRMC1	O00264	195 aa	Known RBP	5.83	□□□□□ -1.48
ATL1-208	ENST00000556067	GABRD	O14764	452 aa		5.83	□□□□□ -1.48
ATL1-208	ENST00000556067	NRP1	O14786	923 aa		5.83	□□□□□ -1.48
ATL1-208	ENST00000556067	SYN3	O14994	580 aa		5.83	□□□□□ -1.48
ATL1-208	ENST00000556067	SART1	O43290	800 aa	Known RBP	5.83	□□□□□ -1.48
ATL1-208	ENST00000556067	BAIAP3	O94812	1187 aa		5.83	□□□□□ -1.48
ATL1-208	ENST00000556067	DDHD2	O94830	711 aa		5.83	□□□□□ -1.48
ATL1-208	ENST00000556067	PROSC	O94903	275 aa		5.83	□□□□□ -1.48
ATL1-208	ENST00000556067	FGB	P02675	491 aa		5.83	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms