RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 ZNF217O75362 1048 aa9.7□□□□□ -0.86
PRKCH-218ENST00000555628 TULP3O75386 442 aa9.7□□□□□ -0.86
PRKCH-218ENST00000555628 HOXB2P14652 356 aa9.7□□□□□ -0.86
PRKCH-218ENST00000555628 POLR2BP30876 1174 aaKnown RBP9.7□□□□□ -0.86
PRKCH-218ENST00000555628 GMPRP36959 345 aa9.7□□□□□ -0.86
PRKCH-218ENST00000555628 PNPLA4P41247 253 aa9.7□□□□□ -0.86
PRKCH-218ENST00000555628 PDE6CP51160 858 aa9.7□□□□□ -0.86
PRKCH-218ENST00000555628 SMAD1Q15797 465 aaKnown RBP9.7□□□□□ -0.86
PRKCH-218ENST00000555628 SOWAHAQ2M3V2 549 aa9.7□□□□□ -0.86
PRKCH-218ENST00000555628 PLEKHG6Q3KR16 790 aa9.7□□□□□ -0.86
PRKCH-218ENST00000555628 VSTM1Q6UX27 236 aa9.7□□□□□ -0.86
PRKCH-218ENST00000555628 LRRC52Q8N7C0 313 aa9.7□□□□□ -0.86
PRKCH-218ENST00000555628 LSM14AQ8ND56 463 aaKnown RBP9.7□□□□□ -0.86
PRKCH-218ENST00000555628 ZSWIM2Q8NEG5 633 aa9.7□□□□□ -0.86
PRKCH-218ENST00000555628 WBP2Q969T9 261 aa9.7□□□□□ -0.86
PRKCH-218ENST00000555628 MYLPFQ96A32 169 aa9.7□□□□□ -0.86
PRKCH-218ENST00000555628 P2RY11Q96G91 374 aa9.7□□□□□ -0.86
PRKCH-218ENST00000555628 MRGPRX1Q96LB2 322 aa9.7□□□□□ -0.86
PRKCH-218ENST00000555628 STRA6Q9BX79 667 aa9.7□□□□□ -0.86
PRKCH-218ENST00000555628 RAB34Q9BZG1 259 aa9.7□□□□□ -0.86
PRKCH-218ENST00000555628 SLC6A17Q9H1V8 727 aa9.7□□□□□ -0.86
PRKCH-218ENST00000555628 ST6GALNAC4Q9H4F1 302 aa9.7□□□□□ -0.86
PRKCH-218ENST00000555628 FAM124BQ9H5Z6 455 aaPredicted RBP9.7□□□□□ -0.86
PRKCH-218ENST00000555628 SMPD4Q9NXE4 827 aa9.7□□□□□ -0.86
PRKCH-218ENST00000555628 USP36Q9P275 1121 aaKnown RBP9.7□□□□□ -0.86
PRKCH-218ENST00000555628 CFAP97Q9P2B7 532 aa9.7□□□□□ -0.86
PRKCH-218ENST00000555628 SUSD2Q9UGT4 822 aa9.7□□□□□ -0.86
PRKCH-218ENST00000555628 CYP8B1Q9UNU6 501 aa9.7□□□□□ -0.86
PRKCH-218ENST00000555628 BTBD3Q9Y2F9 522 aa9.7□□□□□ -0.86
PRKCH-218ENST00000555628 PCDHGB2Q9Y5G2 931 aa9.7□□□□□ -0.86
PRKCH-218ENST00000555628 RAI2Q9Y5P3 530 aa9.7□□□□□ -0.86
PRKCH-218ENST00000555628 COL5A1P20908 1838 aaPredicted RBP9.7□□□□□ -0.86
PRKCH-218ENST00000555628 E2F8A0AVK6 867 aa9.69□□□□□ -0.86
PRKCH-218ENST00000555628 POM121CA8CG34 1229 aa9.69□□□□□ -0.86
PRKCH-218ENST00000555628 STAU1O95793 577 aaKnown RBP9.69□□□□□ -0.86
PRKCH-218ENST00000555628 ITGB3P05106 788 aa9.69□□□□□ -0.86
PRKCH-218ENST00000555628 LMO2P25791 158 aa9.69□□□□□ -0.86
PRKCH-218ENST00000555628 ITPKBP27987 946 aa9.69□□□□□ -0.86
PRKCH-218ENST00000555628 NTSR1P30989 418 aa9.69□□□□□ -0.86
PRKCH-218ENST00000555628 RNF144AP50876 292 aaPredicted RBP9.69□□□□□ -0.86
PRKCH-218ENST00000555628 CACNA2D1P54289 1103 aa9.69□□□□□ -0.86
PRKCH-218ENST00000555628 LARP1BQ659C4 914 aaKnown RBP9.69□□□□□ -0.86
PRKCH-218ENST00000555628 DENND5BQ6ZUT9 1274 aa9.69□□□□□ -0.86
PRKCH-218ENST00000555628 PRICKLE2Q7Z3G6 844 aa9.69□□□□□ -0.86
PRKCH-218ENST00000555628 TRMT11Q7Z4G4 463 aaKnown RBP9.69□□□□□ -0.86
PRKCH-218ENST00000555628 BRSK2Q8IWQ3 736 aa9.69□□□□□ -0.86
PRKCH-218ENST00000555628 SCN4BQ8IWT1 228 aa9.69□□□□□ -0.86
PRKCH-218ENST00000555628 ADGRF2Q8IZF7 708 aa9.69□□□□□ -0.86
PRKCH-218ENST00000555628 PGBD3Q8N328 593 aa9.69□□□□□ -0.86
PRKCH-218ENST00000555628 TOP6BLQ8N6T0 577 aa9.69□□□□□ -0.86
PRKCH-218ENST00000555628 IPO4Q8TEX9 1081 aaKnown RBP9.69□□□□□ -0.86
PRKCH-218ENST00000555628 OTUB2Q96DC9 234 aa9.69□□□□□ -0.86
PRKCH-218ENST00000555628 C8orf76Q96K31 380 aa9.69□□□□□ -0.86
PRKCH-218ENST00000555628 TRIM9Q9C026 710 aa9.69□□□□□ -0.86
PRKCH-218ENST00000555628 ALG2Q9H553 416 aa9.69□□□□□ -0.86
PRKCH-218ENST00000555628 BLOC1S4Q9NUP1 217 aa9.69□□□□□ -0.86
PRKCH-218ENST00000555628 AGO2Q9UKV8 859 aaKnown RBP9.69□□□□□ -0.86
PRKCH-218ENST00000555628 SLCO1B1Q9Y6L6 691 aa9.69□□□□□ -0.86
PRKCH-218ENST00000555628 NUMA1Q14980 2115 aa9.68□□□□□ -0.86
PRKCH-218ENST00000555628 PTPRJQ12913 1337 aa9.68□□□□□ -0.86
PRKCH-218ENST00000555628 UNC79Q9P2D8 2635 aa9.68□□□□□ -0.86
PRKCH-218ENST00000555628 A0A1B0GTW7 788 aa9.68□□□□□ -0.86
PRKCH-218ENST00000555628 EIF4E1BA6NMX2 242 aaKnown RBP9.68□□□□□ -0.86
PRKCH-218ENST00000555628 PRRT4C9JH25 899 aa9.68□□□□□ -0.86
PRKCH-218ENST00000555628 CILPO75339 1184 aa9.68□□□□□ -0.86
PRKCH-218ENST00000555628 IL18RAPO95256 599 aa9.68□□□□□ -0.86
PRKCH-218ENST00000555628 IGLV3-19P01714 112 aa9.68□□□□□ -0.86
PRKCH-218ENST00000555628 BDNFP23560 247 aa9.68□□□□□ -0.86
PRKCH-218ENST00000555628 MAOBP27338 520 aa9.68□□□□□ -0.86
PRKCH-218ENST00000555628 PCSK1P29120 753 aa9.68□□□□□ -0.86
PRKCH-218ENST00000555628 ABCG1P45844 678 aa9.68□□□□□ -0.86
PRKCH-218ENST00000555628 PPP3CCP48454 512 aa9.68□□□□□ -0.86
PRKCH-218ENST00000555628 PSMC1P62191 440 aaKnown RBP9.68□□□□□ -0.86
PRKCH-218ENST00000555628 MYL7Q01449 175 aa9.68□□□□□ -0.86
PRKCH-218ENST00000555628 ENPP2Q13822 863 aa9.68□□□□□ -0.86
PRKCH-218ENST00000555628 C10orf76Q5T2E6 689 aa9.68□□□□□ -0.86
PRKCH-218ENST00000555628 ADALQ6DHV7 355 aa9.68□□□□□ -0.86
PRKCH-218ENST00000555628 TMEM25Q86YD3 366 aa9.68□□□□□ -0.86
PRKCH-218ENST00000555628 SPATA2LQ8IUW3 424 aaPredicted RBP9.68□□□□□ -0.86
PRKCH-218ENST00000555628 BBS7Q8IWZ6 715 aa9.68□□□□□ -0.86
PRKCH-218ENST00000555628 PCED1BQ96HM7 432 aa9.68□□□□□ -0.86
PRKCH-218ENST00000555628 C8orf48Q96LL4 319 aa9.68□□□□□ -0.86
PRKCH-218ENST00000555628 PLIN2Q99541 437 aa9.68□□□□□ -0.86
PRKCH-218ENST00000555628 SYT15Q9BQS2 421 aa9.68□□□□□ -0.86
PRKCH-218ENST00000555628 PARVGQ9HBI0 331 aa9.68□□□□□ -0.86
PRKCH-218ENST00000555628 RAB6BQ9NRW1 208 aa9.68□□□□□ -0.86
PRKCH-218ENST00000555628 TM7SF3Q9NS93 570 aa9.68□□□□□ -0.86
PRKCH-218ENST00000555628 WSB2Q9NYS7 404 aaPredicted RBP9.68□□□□□ -0.86
PRKCH-218ENST00000555628 TRPM5Q9NZQ8 1165 aa9.68□□□□□ -0.86
PRKCH-218ENST00000555628 PIEZO2Q9H5I5 2752 aa9.67□□□□□ -0.86
PRKCH-218ENST00000555628 TP53BP1Q12888 1972 aaPredicted RBP9.67□□□□□ -0.86
PRKCH-218ENST00000555628 SLC35F4A4IF30 521 aa9.67□□□□□ -0.86
PRKCH-218ENST00000555628 FAM149AA5PLN7 773 aa9.67□□□□□ -0.86
PRKCH-218ENST00000555628 TBC1D3BA6NDS4 549 aa9.67□□□□□ -0.86
PRKCH-218ENST00000555628 KCNJ18B7U540 433 aa9.67□□□□□ -0.86
PRKCH-218ENST00000555628 E9PAM4 449 aa9.67□□□□□ -0.86
PRKCH-218ENST00000555628 FLRT2O43155 660 aa9.67□□□□□ -0.86
PRKCH-218ENST00000555628 COCHO43405 550 aa9.67□□□□□ -0.86
PRKCH-218ENST00000555628 WIPF1O43516 503 aa9.67□□□□□ -0.86
PRKCH-218ENST00000555628 TLX3O43711 291 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms