RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 SIPA1Q96FS4 1042 aa8.87□□□□□ -0.99
NEK9-206ENST00000555537 ZSCAN31Q96LW9 406 aaPredicted RBP8.87□□□□□ -0.99
NEK9-206ENST00000555537 KLF16Q9BXK1 252 aaPredicted RBP8.87□□□□□ -0.99
NEK9-206ENST00000555537 ELOVL4Q9GZR5 314 aa8.87□□□□□ -0.99
NEK9-206ENST00000555537 USP36Q9P275 1121 aaKnown RBP8.87□□□□□ -0.99
NEK9-206ENST00000555537 NUDT5Q9UKK9 219 aa8.87□□□□□ -0.99
NEK9-206ENST00000555537 A8MXQ7 604 aa8.86□□□□□ -0.99
NEK9-206ENST00000555537 PYCARD-AS1I3L0S3 204 aa8.86□□□□□ -0.99
NEK9-206ENST00000555537 TK2O00142 265 aa8.86□□□□□ -0.99
NEK9-206ENST00000555537 CBX4O00257 560 aa8.86□□□□□ -0.99
NEK9-206ENST00000555537 GFRA2O00451 464 aa8.86□□□□□ -0.99
NEK9-206ENST00000555537 MDM4O15151 490 aa8.86□□□□□ -0.99
NEK9-206ENST00000555537 SLC26A4O43511 780 aa8.86□□□□□ -0.99
NEK9-206ENST00000555537 TNFSF14O43557 240 aa8.86□□□□□ -0.99
NEK9-206ENST00000555537 BEST1O76090 585 aa8.86□□□□□ -0.99
NEK9-206ENST00000555537 RTN3O95197 1032 aaPredicted RBP8.86□□□□□ -0.99
NEK9-206ENST00000555537 ZDHHC11BP0C7U3 371 aa8.86□□□□□ -0.99
NEK9-206ENST00000555537 IDEP14735 1019 aa8.86□□□□□ -0.99
NEK9-206ENST00000555537 SLC5A3P53794 718 aa8.86□□□□□ -0.99
NEK9-206ENST00000555537 SUZ12Q15022 739 aaKnown RBP8.86□□□□□ -0.99
NEK9-206ENST00000555537 SF3A1Q15459 793 aaKnown RBP8.86□□□□□ -0.99
NEK9-206ENST00000555537 GEN1Q17RS7 908 aa8.86□□□□□ -0.99
NEK9-206ENST00000555537 WDR72Q3MJ13 1102 aa8.86□□□□□ -0.99
NEK9-206ENST00000555537 SNX30Q5VWJ9 437 aa8.86□□□□□ -0.99
NEK9-206ENST00000555537 IL27RAQ6UWB1 636 aa8.86□□□□□ -0.99
NEK9-206ENST00000555537 TRAPPC11Q7Z392 1133 aa8.86□□□□□ -0.99
NEK9-206ENST00000555537 METTL3Q86U44 580 aaKnown RBP8.86□□□□□ -0.99
NEK9-206ENST00000555537 B3GALNT2Q8NCR0 500 aa8.86□□□□□ -0.99
NEK9-206ENST00000555537 CADM4Q8NFZ8 388 aa8.86□□□□□ -0.99
NEK9-206ENST00000555537 OVCA2Q8WZ82 227 aa8.86□□□□□ -0.99
NEK9-206ENST00000555537 HPS3Q969F9 1004 aa8.86□□□□□ -0.99
NEK9-206ENST00000555537 DNAJC19Q96DA6 116 aa8.86□□□□□ -0.99
NEK9-206ENST00000555537 FCRL3Q96P31 734 aaPredicted RBP8.86□□□□□ -0.99
NEK9-206ENST00000555537 MED10Q9BTT4 135 aa8.86□□□□□ -0.99
NEK9-206ENST00000555537 C6orf106Q9H6K1 298 aaPredicted RBP8.86□□□□□ -0.99
NEK9-206ENST00000555537 WDR35Q9P2L0 1181 aa8.86□□□□□ -0.99
NEK9-206ENST00000555537 NXF1Q9UBU9 619 aaKnown RBP8.86□□□□□ -0.99
NEK9-206ENST00000555537 ANKRD6Q9Y2G4 727 aa8.86□□□□□ -0.99
NEK9-206ENST00000555537 PCDHB13Q9Y5F0 798 aa8.86□□□□□ -0.99
NEK9-206ENST00000555537 PCDHGB2Q9Y5G2 931 aa8.86□□□□□ -0.99
NEK9-206ENST00000555537 ZNF233A6NK53 670 aa8.85□□□□□ -0.99
NEK9-206ENST00000555537 H0Y8X5 98 aa8.85□□□□□ -0.99
NEK9-206ENST00000555537 SYNCRIPO60506 623 aaKnown RBP8.85□□□□□ -0.99
NEK9-206ENST00000555537 TLR5O60602 858 aa8.85□□□□□ -0.99
NEK9-206ENST00000555537 TACC1O75410 805 aa8.85□□□□□ -0.99
NEK9-206ENST00000555537 DLATP10515 647 aaKnown RBP8.85□□□□□ -0.99
NEK9-206ENST00000555537 HLA-EP13747 358 aa8.85□□□□□ -0.99
NEK9-206ENST00000555537 JUPP14923 745 aa8.85□□□□□ -0.99
NEK9-206ENST00000555537 ACSL1P33121 698 aa8.85□□□□□ -0.99
NEK9-206ENST00000555537 LONP1P36776 959 aaKnown RBP8.85□□□□□ -0.99
NEK9-206ENST00000555537 COPAP53621 1224 aa8.85□□□□□ -0.99
NEK9-206ENST00000555537 DNAJC3Q13217 504 aa8.85□□□□□ -0.99
NEK9-206ENST00000555537 ORC1Q13415 861 aa8.85□□□□□ -0.99
NEK9-206ENST00000555537 STARD3Q14849 445 aa8.85□□□□□ -0.99
NEK9-206ENST00000555537 PCSK4Q6UW60 755 aa8.85□□□□□ -0.99
NEK9-206ENST00000555537 LRRC69Q6ZNQ3 347 aa8.85□□□□□ -0.99
NEK9-206ENST00000555537 GATAD2AQ86YP4 633 aa8.85□□□□□ -0.99
NEK9-206ENST00000555537 ZMIZ2Q8NF64 920 aa8.85□□□□□ -0.99
NEK9-206ENST00000555537 SORCS1Q8WY21 1168 aa8.85□□□□□ -0.99
NEK9-206ENST00000555537 ZNF516Q92618 1163 aa8.85□□□□□ -0.99
NEK9-206ENST00000555537 PRCCQ92733 491 aaPredicted RBP8.85□□□□□ -0.99
NEK9-206ENST00000555537 KIF2CQ99661 725 aa8.85□□□□□ -0.99
NEK9-206ENST00000555537 NUP58Q9BVL2 599 aa8.85□□□□□ -0.99
NEK9-206ENST00000555537 PANK2Q9BZ23 570 aa8.85□□□□□ -0.99
NEK9-206ENST00000555537 OSER1Q9NX31 292 aa8.85□□□□□ -0.99
NEK9-206ENST00000555537 IL37Q9NZH6 218 aa8.85□□□□□ -0.99
NEK9-206ENST00000555537 MARK1Q9P0L2 795 aa8.85□□□□□ -0.99
NEK9-206ENST00000555537 THAP10Q9P2Z0 257 aaPredicted RBP8.85□□□□□ -0.99
NEK9-206ENST00000555537 FBXO10Q9UK96 956 aa8.85□□□□□ -0.99
NEK9-206ENST00000555537 CLEC4EQ9ULY5 219 aa8.85□□□□□ -0.99
NEK9-206ENST00000555537 NFE2L3Q9Y4A8 694 aa8.85□□□□□ -0.99
NEK9-206ENST00000555537 AK5Q9Y6K8 562 aa8.85□□□□□ -0.99
NEK9-206ENST00000555537 TMEM131Q92545 1883 aa8.85□□□□□ -0.99
NEK9-206ENST00000555537 APC2O95996 2303 aa8.85□□□□□ -0.99
NEK9-206ENST00000555537 H3BQV1 296 aa8.84□□□□□ -0.99
NEK9-206ENST00000555537 AP1G2O75843 785 aa8.84□□□□□ -0.99
NEK9-206ENST00000555537 ACADMP11310 421 aa8.84□□□□□ -0.99
NEK9-206ENST00000555537 GAP43P17677 238 aa8.84□□□□□ -0.99
NEK9-206ENST00000555537 TNNI1P19237 187 aa8.84□□□□□ -0.99
NEK9-206ENST00000555537 ACO1P21399 889 aaKnown RBP8.84□□□□□ -0.99
NEK9-206ENST00000555537 PRKCHP24723 683 aa8.84□□□□□ -0.99
NEK9-206ENST00000555537 OXTRP30559 389 aa8.84□□□□□ -0.99
NEK9-206ENST00000555537 ATP5C1P36542 298 aaKnown RBP8.84□□□□□ -0.99
NEK9-206ENST00000555537 TUBP50607 506 aa8.84□□□□□ -0.99
NEK9-206ENST00000555537 AFF3P51826 1226 aaKnown RBP8.84□□□□□ -0.99
NEK9-206ENST00000555537 MAP3K7CLP57077 242 aa8.84□□□□□ -0.99
NEK9-206ENST00000555537 MYL6P60660 151 aa8.84□□□□□ -0.99
NEK9-206ENST00000555537 TNNC1P63316 161 aa8.84□□□□□ -0.99
NEK9-206ENST00000555537 TARDBPQ13148 414 aaKnown RBP eCLIP8.84□□□□□ -0.99
NEK9-206ENST00000555537 RRAGBQ5VZM2 374 aa8.84□□□□□ -0.99
NEK9-206ENST00000555537 SV2BQ7L1I2 683 aa8.84□□□□□ -0.99
NEK9-206ENST00000555537 FAM35AQ86V20 835 aa8.84□□□□□ -0.99
NEK9-206ENST00000555537 FUKQ8N0W3 1084 aa8.84□□□□□ -0.99
NEK9-206ENST00000555537 CCDC127Q96BQ5 260 aa8.84□□□□□ -0.99
NEK9-206ENST00000555537 SMOQ99835 787 aa8.84□□□□□ -0.99
NEK9-206ENST00000555537 DUSP9Q99956 384 aaKnown RBP8.84□□□□□ -0.99
NEK9-206ENST00000555537 SMYD3Q9H7B4 428 aa8.84□□□□□ -0.99
NEK9-206ENST00000555537 TM9SF3Q9HD45 589 aa8.84□□□□□ -0.99
NEK9-206ENST00000555537 SEL1LQ9UBV2 794 aa8.84□□□□□ -0.99
NEK9-206ENST00000555537 ASH1LQ9NR48 2969 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms