RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 L1RE1Q9UN81 338 aa6.14□□□□□ -1.43
VRK1-203ENST00000555067 LRCH1Q9Y2L9 728 aa6.14□□□□□ -1.43
VRK1-203ENST00000555067 GPR52Q9Y2T5 361 aa6.14□□□□□ -1.43
VRK1-203ENST00000555067 FAM227AF5H4B4 570 aa6.13□□□□□ -1.43
VRK1-203ENST00000555067 PSMD9O00233 223 aa6.13□□□□□ -1.43
VRK1-203ENST00000555067 FPR3P25089 353 aa6.13□□□□□ -1.43
VRK1-203ENST00000555067 PIK3CBP42338 1070 aa6.13□□□□□ -1.43
VRK1-203ENST00000555067 NR4A2P43354 598 aa6.13□□□□□ -1.43
VRK1-203ENST00000555067 PRIM2P49643 509 aa6.13□□□□□ -1.43
VRK1-203ENST00000555067 SUMO2P61956 95 aaKnown RBP6.13□□□□□ -1.43
VRK1-203ENST00000555067 BTKQ06187 659 aa6.13□□□□□ -1.43
VRK1-203ENST00000555067 PLA1AQ53H76 456 aa6.13□□□□□ -1.43
VRK1-203ENST00000555067 RNASE12Q5GAN4 147 aaKnown RBP6.13□□□□□ -1.43
VRK1-203ENST00000555067 RNF220Q5VTB9 566 aa6.13□□□□□ -1.43
VRK1-203ENST00000555067 ZNF813Q6ZN06 617 aa6.13□□□□□ -1.43
VRK1-203ENST00000555067 TECPR1Q7Z6L1 1165 aa6.13□□□□□ -1.43
VRK1-203ENST00000555067 SFTPA1Q8IWL2 248 aa6.13□□□□□ -1.43
VRK1-203ENST00000555067 MYCT1Q8N699 235 aa6.13□□□□□ -1.43
VRK1-203ENST00000555067 IL17REQ8NFR9 667 aa6.13□□□□□ -1.43
VRK1-203ENST00000555067 BPIFB1Q8TDL5 484 aa6.13□□□□□ -1.43
VRK1-203ENST00000555067 PRR25Q96S07 402 aa6.13□□□□□ -1.43
VRK1-203ENST00000555067 SPRTNQ9H040 489 aaPredicted RBP6.13□□□□□ -1.43
VRK1-203ENST00000555067 ARFGAP3Q9NP61 516 aa6.13□□□□□ -1.43
VRK1-203ENST00000555067 CDC23Q9UJX2 597 aa6.13□□□□□ -1.43
VRK1-203ENST00000555067 FBXO2Q9UK22 296 aaPredicted RBP6.13□□□□□ -1.43
VRK1-203ENST00000555067 AMFRQ9UKV5 643 aa6.13□□□□□ -1.43
VRK1-203ENST00000555067 BTBD19C9JJ37 291 aa6.12□□□□□ -1.43
VRK1-203ENST00000555067 TMEM232C9JQI7 657 aa6.12□□□□□ -1.43
VRK1-203ENST00000555067 AP4M1O00189 453 aa6.12□□□□□ -1.43
VRK1-203ENST00000555067 GOLIM4O00461 696 aa6.12□□□□□ -1.43
VRK1-203ENST00000555067 BTN3A1O00481 513 aa6.12□□□□□ -1.43
VRK1-203ENST00000555067 TCERG1O14776 1098 aaKnown RBP6.12□□□□□ -1.43
VRK1-203ENST00000555067 UBXN7O94888 489 aa6.12□□□□□ -1.43
VRK1-203ENST00000555067 HSD3B1P14060 373 aa6.12□□□□□ -1.43
VRK1-203ENST00000555067 POU5F1Q01860 360 aaKnown RBP6.12□□□□□ -1.43
VRK1-203ENST00000555067 TBX2Q13207 712 aaPredicted RBP6.12□□□□□ -1.43
VRK1-203ENST00000555067 RAB32Q13637 225 aa6.12□□□□□ -1.43
VRK1-203ENST00000555067 FAM187BQ17R55 369 aa6.12□□□□□ -1.43
VRK1-203ENST00000555067 RUSC1-AS1Q66K80 236 aa6.12□□□□□ -1.43
VRK1-203ENST00000555067 NPNTQ6UXI9 565 aa6.12□□□□□ -1.43
VRK1-203ENST00000555067 OR2C3Q8N628 320 aa6.12□□□□□ -1.43
VRK1-203ENST00000555067 ADAMTS18Q8TE60 1221 aa6.12□□□□□ -1.43
VRK1-203ENST00000555067 MMS19Q96T76 1030 aa6.12□□□□□ -1.43
VRK1-203ENST00000555067 B3GNT5Q9BYG0 378 aa6.12□□□□□ -1.43
VRK1-203ENST00000555067 MS4A7Q9GZW8 240 aaPredicted RBP6.12□□□□□ -1.43
VRK1-203ENST00000555067 KLHL13Q9P2N7 655 aa6.12□□□□□ -1.43
VRK1-203ENST00000555067 CNTNAP2Q9UHC6 1331 aa6.12□□□□□ -1.43
VRK1-203ENST00000555067 SCAF8Q9UPN6 1271 aaKnown RBP6.12□□□□□ -1.43
VRK1-203ENST00000555067 M0R3H8 397 aa6.11□□□□□ -1.43
VRK1-203ENST00000555067 SNX2O60749 519 aa6.11□□□□□ -1.43
VRK1-203ENST00000555067 VNN1O95497 513 aa6.11□□□□□ -1.43
VRK1-203ENST00000555067 ABCB4P21439 1286 aa6.11□□□□□ -1.43
VRK1-203ENST00000555067 IL1R2P27930 398 aa6.11□□□□□ -1.43
VRK1-203ENST00000555067 PEX2P28328 305 aa6.11□□□□□ -1.43
VRK1-203ENST00000555067 GKP32189 559 aa6.11□□□□□ -1.43
VRK1-203ENST00000555067 PPM1AP35813 382 aa6.11□□□□□ -1.43
VRK1-203ENST00000555067 SLC13A2Q13183 592 aa6.11□□□□□ -1.43
VRK1-203ENST00000555067 CTBP1Q13363 440 aa6.11□□□□□ -1.43
VRK1-203ENST00000555067 ZNF268Q14587 947 aaPredicted RBP6.11□□□□□ -1.43
VRK1-203ENST00000555067 TOMM20Q15388 145 aa6.11□□□□□ -1.43
VRK1-203ENST00000555067 LY6KQ17RY6 165 aa6.11□□□□□ -1.43
VRK1-203ENST00000555067 Q4G0T1 1027 aa6.11□□□□□ -1.43
VRK1-203ENST00000555067 CCDC184Q52MB2 194 aa6.11□□□□□ -1.43
VRK1-203ENST00000555067 TLDC1Q6P9B6 456 aa6.11□□□□□ -1.43
VRK1-203ENST00000555067 DPY19L3Q6ZPD9 716 aa6.11□□□□□ -1.43
VRK1-203ENST00000555067 BCDIN3DQ7Z5W3 292 aaKnown RBP6.11□□□□□ -1.43
VRK1-203ENST00000555067 DPP9Q86TI2 863 aa6.11□□□□□ -1.43
VRK1-203ENST00000555067 RAB11FIP4Q86YS3 637 aa6.11□□□□□ -1.43
VRK1-203ENST00000555067 SPARTQ8N0X7 666 aa6.11□□□□□ -1.43
VRK1-203ENST00000555067 KRT78Q8N1N4 520 aa6.11□□□□□ -1.43
VRK1-203ENST00000555067 KIAA1191Q96A73 305 aa6.11□□□□□ -1.43
VRK1-203ENST00000555067 ERP27Q96DN0 273 aa6.11□□□□□ -1.43
VRK1-203ENST00000555067 C17orf80Q9BSJ5 609 aa6.11□□□□□ -1.43
VRK1-203ENST00000555067 ISCA1Q9BUE6 129 aa6.11□□□□□ -1.43
VRK1-203ENST00000555067 MYLK2Q9H1R3 596 aa6.11□□□□□ -1.43
VRK1-203ENST00000555067 AGO4Q9HCK5 861 aaKnown RBP6.11□□□□□ -1.43
VRK1-203ENST00000555067 TRNAU1APQ9NX07 287 aaKnown RBP6.11□□□□□ -1.43
VRK1-203ENST00000555067 RRN3Q9NYV6 651 aa6.11□□□□□ -1.43
VRK1-203ENST00000555067 CLIC5Q9NZA1 410 aa6.11□□□□□ -1.43
VRK1-203ENST00000555067 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.11□□□□□ -1.43
VRK1-203ENST00000555067 POLG2Q9UHN1 485 aa6.11□□□□□ -1.43
VRK1-203ENST00000555067 HDAC9Q9UKV0 1011 aa6.11□□□□□ -1.43
VRK1-203ENST00000555067 TCRBV5S1A1TA0A578 114 aa6.1□□□□□ -1.43
VRK1-203ENST00000555067 J3KRW8 73 aa6.1□□□□□ -1.43
VRK1-203ENST00000555067 SOCS2O14508 198 aa6.1□□□□□ -1.43
VRK1-203ENST00000555067 DSCR3O14972 297 aa6.1□□□□□ -1.43
VRK1-203ENST00000555067 PHGDHO43175 533 aaKnown RBP6.1□□□□□ -1.43
VRK1-203ENST00000555067 TBC1D4O60343 1298 aa6.1□□□□□ -1.43
VRK1-203ENST00000555067 GCATO75600 419 aa6.1□□□□□ -1.43
VRK1-203ENST00000555067 PYGLP06737 847 aa6.1□□□□□ -1.43
VRK1-203ENST00000555067 TNFSF4P23510 183 aa6.1□□□□□ -1.43
VRK1-203ENST00000555067 ATP5F1P24539 256 aaPredicted RBP6.1□□□□□ -1.43
VRK1-203ENST00000555067 TNFAIP2Q03169 654 aa6.1□□□□□ -1.43
VRK1-203ENST00000555067 CCNIQ14094 377 aa6.1□□□□□ -1.43
VRK1-203ENST00000555067 RABEP1Q15276 862 aa6.1□□□□□ -1.43
VRK1-203ENST00000555067 ANO6Q4KMQ2 910 aa6.1□□□□□ -1.43
VRK1-203ENST00000555067 DGKKQ5KSL6 1271 aa6.1□□□□□ -1.43
VRK1-203ENST00000555067 TMEM63BQ5T3F8 832 aa6.1□□□□□ -1.43
VRK1-203ENST00000555067 MEX3CQ5U5Q3 659 aaKnown RBP6.1□□□□□ -1.43
VRK1-203ENST00000555067 DENND2CQ68D51 928 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms