RNA–Protein interactions for RNA: ENST00000555052.1

ARHGEF40-205, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 3

Gene ARHGEF40, Length 935 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-205ENST00000555052 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.54■□□□□ 0.24
ARHGEF40-205ENST00000555052 ZDHHC9Q9Y397 364 aa16.54■□□□□ 0.24
ARHGEF40-205ENST00000555052 CEP192Q8TEP8 1941 aa16.53■□□□□ 0.24
ARHGEF40-205ENST00000555052 A0A1W2PQH9 124 aa16.53■□□□□ 0.24
ARHGEF40-205ENST00000555052 NEDD8-MDP1E9PL57 170 aa16.53■□□□□ 0.24
ARHGEF40-205ENST00000555052 KIF20AO95235 890 aa16.53■□□□□ 0.24
ARHGEF40-205ENST00000555052 HOXB2P14652 356 aa16.53■□□□□ 0.24
ARHGEF40-205ENST00000555052 TYRP14679 529 aa16.53■□□□□ 0.24
ARHGEF40-205ENST00000555052 GABRG2P18507 467 aa16.53■□□□□ 0.24
ARHGEF40-205ENST00000555052 CSRP1P21291 193 aaKnown RBP16.53■□□□□ 0.24
ARHGEF40-205ENST00000555052 ACO1P21399 889 aaKnown RBP16.53■□□□□ 0.24
ARHGEF40-205ENST00000555052 NTSR1P30989 418 aa16.53■□□□□ 0.24
ARHGEF40-205ENST00000555052 ATP5C1P36542 298 aaKnown RBP16.53■□□□□ 0.24
ARHGEF40-205ENST00000555052 SYKP43405 635 aa16.53■□□□□ 0.24
ARHGEF40-205ENST00000555052 GCLMP48507 274 aa16.53■□□□□ 0.24
ARHGEF40-205ENST00000555052 NDUFA8P51970 172 aa16.53■□□□□ 0.24
ARHGEF40-205ENST00000555052 KIF11P52732 1056 aa16.53■□□□□ 0.24
ARHGEF40-205ENST00000555052 BYSLQ13895 437 aaKnown RBP16.53■□□□□ 0.24
ARHGEF40-205ENST00000555052 TRIM61Q5EBN2 209 aa16.53■□□□□ 0.24
ARHGEF40-205ENST00000555052 SH3PXD2AQ5TCZ1 1133 aa16.53■□□□□ 0.24
ARHGEF40-205ENST00000555052 EGFLAMQ63HQ2 1017 aa16.53■□□□□ 0.24
ARHGEF40-205ENST00000555052 NUDT18Q6ZVK8 323 aa16.53■□□□□ 0.24
ARHGEF40-205ENST00000555052 ARMCX6Q7L4S7 300 aa16.53■□□□□ 0.24
ARHGEF40-205ENST00000555052 GUF1Q8N442 669 aaKnown RBP16.53■□□□□ 0.24
ARHGEF40-205ENST00000555052 SPRYD3Q8NCJ5 442 aa16.53■□□□□ 0.24
ARHGEF40-205ENST00000555052 JAKMIP2Q96AA8 810 aa16.53■□□□□ 0.24
ARHGEF40-205ENST00000555052 CYFIP2Q96F07 1278 aa16.53■□□□□ 0.24
ARHGEF40-205ENST00000555052 P2RY11Q96G91 374 aa16.53■□□□□ 0.24
ARHGEF40-205ENST00000555052 SPATA32Q96LK8 384 aa16.53■□□□□ 0.24
ARHGEF40-205ENST00000555052 BBS2Q9BXC9 721 aa16.53■□□□□ 0.24
ARHGEF40-205ENST00000555052 IMPG2Q9BZV3 1241 aa16.53■□□□□ 0.24
ARHGEF40-205ENST00000555052 CIZ1Q9ULV3 898 aaPredicted RBP16.53■□□□□ 0.24
ARHGEF40-205ENST00000555052 WASF3Q9UPY6 502 aa16.53■□□□□ 0.24
ARHGEF40-205ENST00000555052 PRRT4C9JH25 899 aa16.52■□□□□ 0.24
ARHGEF40-205ENST00000555052 MDM4O15151 490 aa16.52■□□□□ 0.24
ARHGEF40-205ENST00000555052 MAP3K13O43283 966 aa16.52■□□□□ 0.24
ARHGEF40-205ENST00000555052 RARGP13631 454 aa16.52■□□□□ 0.24
ARHGEF40-205ENST00000555052 TRIM21P19474 475 aaKnown RBP16.52■□□□□ 0.24
ARHGEF40-205ENST00000555052 HOXD12P35452 270 aa16.52■□□□□ 0.24
ARHGEF40-205ENST00000555052 GOLGA8FQ08AF8 430 aa16.52■□□□□ 0.24
ARHGEF40-205ENST00000555052 GOLGA8DPQ0D2H9 430 aa16.52■□□□□ 0.24
ARHGEF40-205ENST00000555052 ZNF252P-AS1Q0IIN9 211 aa16.52■□□□□ 0.24
ARHGEF40-205ENST00000555052 LMAN2Q12907 356 aa16.52■□□□□ 0.24
ARHGEF40-205ENST00000555052 ZCWPW2Q504Y3 356 aa16.52■□□□□ 0.24
ARHGEF40-205ENST00000555052 LYSMD4Q5XG99 296 aa16.52■□□□□ 0.24
ARHGEF40-205ENST00000555052 TOGARAM2Q6ZUX3 1019 aa16.52■□□□□ 0.24
ARHGEF40-205ENST00000555052 CCDC186Q7Z3E2 898 aa16.52■□□□□ 0.24
ARHGEF40-205ENST00000555052 SCD5Q86SK9 330 aa16.52■□□□□ 0.24
ARHGEF40-205ENST00000555052 FAM186BQ8IYM0 893 aa16.52■□□□□ 0.24
ARHGEF40-205ENST00000555052 ZNF276Q8N554 614 aa16.52■□□□□ 0.24
ARHGEF40-205ENST00000555052 XPO6Q96QU8 1125 aaKnown RBP16.52■□□□□ 0.24
ARHGEF40-205ENST00000555052 ACOX2Q99424 681 aa16.52■□□□□ 0.24
ARHGEF40-205ENST00000555052 GABRG3Q99928 467 aa16.52■□□□□ 0.24
ARHGEF40-205ENST00000555052 CALCOCO1Q9P1Z2 691 aa16.52■□□□□ 0.24
ARHGEF40-205ENST00000555052 WDR35Q9P2L0 1181 aa16.52■□□□□ 0.24
ARHGEF40-205ENST00000555052 DNMT3LQ9UJW3 386 aa16.52■□□□□ 0.24
ARHGEF40-205ENST00000555052 LSM7Q9UK45 103 aaKnown RBP16.52■□□□□ 0.24
ARHGEF40-205ENST00000555052 PILRBQ9UKJ0 227 aa16.52■□□□□ 0.24
ARHGEF40-205ENST00000555052 USP3Q9Y6I4 520 aa16.52■□□□□ 0.24
ARHGEF40-205ENST00000555052 PCDH15Q96QU1 1955 aa16.51■□□□□ 0.23
ARHGEF40-205ENST00000555052 ATXN2Q99700 1313 aaKnown RBP16.51■□□□□ 0.23
ARHGEF40-205ENST00000555052 CISD3P0C7P0 127 aa16.51■□□□□ 0.23
ARHGEF40-205ENST00000555052 CEACAM1P13688 526 aa16.51■□□□□ 0.23
ARHGEF40-205ENST00000555052 CD58P19256 250 aa16.51■□□□□ 0.23
ARHGEF40-205ENST00000555052 ITPKAP23677 461 aa16.51■□□□□ 0.23
ARHGEF40-205ENST00000555052 DPP6P42658 865 aa16.51■□□□□ 0.23
ARHGEF40-205ENST00000555052 WASP42768 502 aa16.51■□□□□ 0.23
ARHGEF40-205ENST00000555052 KRT85P78386 507 aa16.51■□□□□ 0.23
ARHGEF40-205ENST00000555052 PPP1R26Q5T8A7 1209 aaPredicted RBP16.51■□□□□ 0.23
ARHGEF40-205ENST00000555052 SLC23A3Q6PIS1 610 aa16.51■□□□□ 0.23
ARHGEF40-205ENST00000555052 TPGS1Q6ZTW0 290 aa16.51■□□□□ 0.23
ARHGEF40-205ENST00000555052 PGBD3Q8N328 593 aa16.51■□□□□ 0.23
ARHGEF40-205ENST00000555052 NUSAP1Q9BXS6 441 aaKnown RBP16.51■□□□□ 0.23
ARHGEF40-205ENST00000555052 DUSP16Q9BY84 665 aa16.51■□□□□ 0.23
ARHGEF40-205ENST00000555052 TMEM8AQ9HCN3 771 aa16.51■□□□□ 0.23
ARHGEF40-205ENST00000555052 FBXO10Q9UK96 956 aa16.51■□□□□ 0.23
ARHGEF40-205ENST00000555052 NUDT5Q9UKK9 219 aa16.51■□□□□ 0.23
ARHGEF40-205ENST00000555052 MAPK8IP1Q9UQF2 711 aa16.51■□□□□ 0.23
ARHGEF40-205ENST00000555052 IGHV1OR15-9A0A0B4J2B8 117 aa16.5■□□□□ 0.23
ARHGEF40-205ENST00000555052 AP5Z1O43299 807 aa16.5■□□□□ 0.23
ARHGEF40-205ENST00000555052 STC2O76061 302 aa16.5■□□□□ 0.23
ARHGEF40-205ENST00000555052 KRT13P13646 458 aa16.5■□□□□ 0.23
ARHGEF40-205ENST00000555052 ENGP17813 658 aa16.5■□□□□ 0.23
ARHGEF40-205ENST00000555052 NDUFV2P19404 249 aa16.5■□□□□ 0.23
ARHGEF40-205ENST00000555052 GTF2H1P32780 548 aa16.5■□□□□ 0.23
ARHGEF40-205ENST00000555052 PSMC2P35998 433 aaKnown RBP16.5■□□□□ 0.23
ARHGEF40-205ENST00000555052 PLA2G4AP47712 749 aa16.5■□□□□ 0.23
ARHGEF40-205ENST00000555052 PSEN1P49768 467 aa16.5■□□□□ 0.23
ARHGEF40-205ENST00000555052 C10orf120Q5SQS8 335 aa16.5■□□□□ 0.23
ARHGEF40-205ENST00000555052 KIAA1211LQ6NV74 962 aa16.5■□□□□ 0.23
ARHGEF40-205ENST00000555052 KRBA2Q6ZNG9 492 aa16.5■□□□□ 0.23
ARHGEF40-205ENST00000555052 CHPFQ8IZ52 775 aa16.5■□□□□ 0.23
ARHGEF40-205ENST00000555052 IPO4Q8TEX9 1081 aaKnown RBP16.5■□□□□ 0.23
ARHGEF40-205ENST00000555052 SEMA4DQ92854 862 aa16.5■□□□□ 0.23
ARHGEF40-205ENST00000555052 CCDC47Q96A33 483 aaKnown RBP16.5■□□□□ 0.23
ARHGEF40-205ENST00000555052 FAXDC2Q96IV6 333 aa16.5■□□□□ 0.23
ARHGEF40-205ENST00000555052 GOLPH3LQ9H4A5 285 aa16.5■□□□□ 0.23
ARHGEF40-205ENST00000555052 CLIC5Q9NZA1 410 aa16.5■□□□□ 0.23
ARHGEF40-205ENST00000555052 NAGPAQ9UK23 515 aa16.5■□□□□ 0.23
ARHGEF40-205ENST00000555052 CABIN1Q9Y6J0 2220 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms